| chondroitin sulfate metabolic process | GO:0030204 | 2 | 1.000 | |
| cellular carbohydrate biosynthetic process | GO:0034637 | 7 | 1.000 | |
| cellular polysaccharide biosynthetic process | GO:0033692 | 7 | 0.999 | |
| heparan sulfate proteoglycan biosynthetic process | GO:0015012 | 10 | 0.997 | |
| polysaccharide biosynthetic process | GO:0000271 | 7 | 0.997 | |
| glycosaminoglycan biosynthetic process | GO:0006024 | 7 | 0.996 | |
| chondroitin sulfate proteoglycan metabolic process | GO:0050654 | 3 | 0.988 | |
| sulfur compound biosynthetic process | GO:0044272 | 16 | 0.988 | |
| aminoglycan metabolic process | GO:0006022 | 18 | 0.980 | |
| heparan sulfate proteoglycan metabolic process | GO:0030201 | 10 | 0.962 | |
| heparan sulfate proteoglycan biosynthetic process polysaccharide chain biosynthetic process | GO:0015014 | 5 | 0.958 | |
| chondroitin sulfate proteoglycan biosynthetic process | GO:0050650 | 3 | 0.953 | |
| sulfur compound metabolic process | GO:0006790 | 59 | 0.944 | |
| chondroitin sulfate biosynthetic process | GO:0030206 | 2 | 0.921 | |
| heparin metabolic process | GO:0030202 | 4 | 0.917 | |
| aminoglycan biosynthetic process | GO:0006023 | 11 | 0.906 | |
| retinal ganglion cell axon guidance | GO:0031290 | 12 | 0.904 | Zebrafish |
| proteoglycan biosynthetic process | GO:0030166 | 10 | 0.882 | |
| positive regulation of fibroblast growth factor receptor signaling pathway | GO:0045743 | 5 | 0.814 | Zebrafish |
| glycoprotein metabolic process | GO:0009100 | 41 | 0.808 | |
| synaptic vesicle endocytosis | GO:0048488 | 28 | 0.799 | Fly |
| mitochondrion distribution | GO:0048311 | 10 | 0.765 | Fly |
| glycoprotein biosynthetic process | GO:0009101 | 41 | 0.765 | |
| glycosaminoglycan metabolic process | GO:0030203 | 11 | 0.730 | |
| imaginal disc derived wing vein specification | GO:0007474 | 48 | 0.721 | |
| regionalization | GO:0003002 | 416 | 0.700 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.589 | |
| synaptic vesicle transport | GO:0048489 | 50 | 0.539 | Fly |
| intracellular distribution of mitochondria | GO:0048312 | 5 | 0.530 | Fly |
| wing disc morphogenesis | GO:0007472 | 344 | 0.527 | |
| cellular polysaccharide metabolic process | GO:0044264 | 11 | 0.516 | |
| cellular carbohydrate metabolic process | GO:0044262 | 22 | 0.500 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.491 | Zebrafish |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.487 | |
| establishment of vesicle localization | GO:0051650 | 51 | 0.476 | Fly |
| cellular response to fibroblast growth factor stimulus | GO:0044344 | 10 | 0.462 | Zebrafish |
| segmentation | GO:0035282 | 207 | 0.426 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 85 | 0.386 | |
| neuron projection guidance | GO:0097485 | 241 | 0.379 | Zebrafish Fly |
| smoothened signaling pathway | GO:0007224 | 49 | 0.361 | |
| response to fibroblast growth factor | GO:0071774 | 10 | 0.347 | Zebrafish |
| proteoglycan metabolic process | GO:0006029 | 10 | 0.322 | |
| imaginal disc derived wing margin morphogenesis | GO:0008587 | 41 | 0.306 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 65 | 0.297 | |
| mucopolysaccharide metabolic process | GO:1903510 | 5 | 0.268 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.266 | Zebrafish |
| synaptic vesicle localization | GO:0097479 | 53 | 0.254 | Fly |
| synapse organization | GO:0050808 | 196 | 0.251 | Fly |
| axon guidance | GO:0007411 | 233 | 0.240 | Zebrafish Fly |
| pharynx development | GO:0060465 | 1 | 0.240 | |
| mitochondrion organization | GO:0007005 | 65 | 0.239 | Fly |
| germ cell migration | GO:0008354 | 43 | 0.236 | Fly |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.215 | Zebrafish |
| axonogenesis | GO:0007409 | 290 | 0.213 | Zebrafish Fly |
| single organism carbohydrate metabolic process | GO:0044723 | 72 | 0.210 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.200 | Zebrafish |
| fibroblast growth factor receptor signaling pathway | GO:0008543 | 10 | 0.198 | Zebrafish |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.194 | |
| mitochondrion localization | GO:0051646 | 17 | 0.189 | Fly |
| polysaccharide metabolic process | GO:0005976 | 11 | 0.186 | |
| carbohydrate biosynthetic process | GO:0016051 | 17 | 0.186 | |
| regulation of smoothened signaling pathway | GO:0008589 | 28 | 0.167 | Fly |
| oxoacid metabolic process | GO:0043436 | 103 | 0.161 | |
| localization of cell | GO:0051674 | 257 | 0.145 | Fly |
| vesicle localization | GO:0051648 | 55 | 0.143 | Fly |
| peptidyl threonine phosphorylation | GO:0018107 | 2 | 0.141 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.133 | Zebrafish |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.125 | |
| organelle localization | GO:0051640 | 148 | 0.124 | Fly |
| cell motility | GO:0048870 | 251 | 0.123 | Fly |
| carbohydrate metabolic process | GO:0005975 | 82 | 0.120 | |
| digestive tract development | GO:0048565 | 149 | 0.119 | Mouse |
| cellular protein modification process | GO:0006464 | 438 | 0.119 | |
| chemotaxis | GO:0006935 | 249 | 0.115 | Zebrafish Fly |
| regulation of neurogenesis | GO:0050767 | 158 | 0.105 | Zebrafish |
| protein ubiquitination | GO:0016567 | 70 | 0.105 | |
| synaptic transmission | GO:0007268 | 288 | 0.104 | Fly |
| segment polarity determination | GO:0007367 | 25 | 0.098 | |
| digestive system development | GO:0055123 | 149 | 0.093 | Mouse |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.091 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.090 | Zebrafish Mouse |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.089 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.088 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 61 | 0.087 | Zebrafish |
| appendage development | GO:0048736 | 401 | 0.085 | Zebrafish |
| chromosome segregation | GO:0007059 | 157 | 0.083 | |
| endocytosis | GO:0006897 | 310 | 0.083 | Fly |
| regulation of cell morphogenesis | GO:0022604 | 163 | 0.081 | Zebrafish |
| wnt signaling pathway | GO:0016055 | 98 | 0.080 | |
| epithelium migration | GO:0090132 | 148 | 0.076 | |
| periodic partitioning | GO:0007365 | 29 | 0.076 | |
| embryonic organ development | GO:0048568 | 50 | 0.073 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.072 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.069 | |
| connective tissue development | GO:0061448 | 3 | 0.068 | Zebrafish |
| leg disc development | GO:0035218 | 92 | 0.068 | |
| protein catabolic process | GO:0030163 | 101 | 0.063 | |
| cell migration | GO:0016477 | 238 | 0.061 | Fly |
| single organism cellular localization | GO:1902580 | 180 | 0.058 | Fly |
| vesicle mediated transport | GO:0016192 | 381 | 0.055 | Fly |
| apposition of dorsal and ventral imaginal disc derived wing surfaces | GO:0007475 | 15 | 0.055 | |
| regulation of epithelial cell proliferation | GO:0050678 | 4 | 0.054 | |
| cardiovascular system development | GO:0072358 | 82 | 0.051 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.051 | Zebrafish |
| macromolecular complex assembly | GO:0065003 | 256 | 0.050 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.049 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.049 | Zebrafish |
| regulation of cell projection organization | GO:0031344 | 92 | 0.047 | Zebrafish |
| protein localization | GO:0008104 | 284 | 0.044 | |
| segment specification | GO:0007379 | 33 | 0.044 | |
| synaptic vesicle recycling | GO:0036465 | 28 | 0.044 | Fly |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.043 | |
| protein palmitoylation | GO:0018345 | 2 | 0.042 | |
| lipid metabolic process | GO:0006629 | 121 | 0.041 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.041 | Zebrafish |
| negative regulation of gene expression | GO:0010629 | 387 | 0.040 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.040 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.040 | Zebrafish |
| chromosome organization | GO:0051276 | 360 | 0.039 | |
| forebrain development | GO:0030900 | 2 | 0.039 | |
| cuticle development | GO:0042335 | 86 | 0.039 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.038 | Mouse |
| chromatin organization | GO:0006325 | 207 | 0.038 | |
| tissue migration | GO:0090130 | 155 | 0.037 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.037 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.037 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.036 | |
| erbb signaling pathway | GO:0038127 | 58 | 0.035 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.035 | |
| axon development | GO:0061564 | 297 | 0.034 | Zebrafish Fly |
| regulation of fibroblast growth factor receptor signaling pathway | GO:0040036 | 7 | 0.032 | Zebrafish |
| regulation of reproductive process | GO:2000241 | 54 | 0.032 | |
| imaginal disc derived leg morphogenesis | GO:0007480 | 80 | 0.031 | |
| positive regulation of protein secretion | GO:0050714 | 9 | 0.028 | |
| phagocytosis | GO:0006909 | 215 | 0.027 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.027 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.027 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.026 | Zebrafish |
| eye development | GO:0001654 | 323 | 0.025 | |
| developmental growth involved in morphogenesis | GO:0060560 | 65 | 0.025 | Zebrafish |
| amine metabolic process | GO:0009308 | 12 | 0.025 | |
| regulation of notch signaling pathway | GO:0008593 | 100 | 0.025 | |
| regulation of extent of cell growth | GO:0061387 | 8 | 0.025 | Zebrafish |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.024 | |
| proteolysis | GO:0006508 | 192 | 0.024 | |
| positive regulation of cell motility | GO:2000147 | 3 | 0.024 | |
| establishment of synaptic vesicle localization | GO:0097480 | 50 | 0.024 | Fly |
| single organism membrane organization | GO:0044802 | 93 | 0.024 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.024 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.024 | |
| cellular response to growth factor stimulus | GO:0071363 | 30 | 0.024 | Zebrafish |
| macromolecule catabolic process | GO:0009057 | 161 | 0.024 | |
| homeostatic process | GO:0042592 | 199 | 0.023 | |
| protein modification process | GO:0036211 | 438 | 0.023 | |
| tube morphogenesis | GO:0035239 | 191 | 0.023 | Mouse |
| regulation of protein localization | GO:0032880 | 76 | 0.022 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.022 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.022 | |
| histone h3 k4 methylation | GO:0051568 | 16 | 0.021 | |
| spindle organization | GO:0007051 | 253 | 0.021 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.021 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.021 | |
| chaeta development | GO:0022416 | 97 | 0.021 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 94 | 0.021 | |
| regulation of cellular component movement | GO:0051270 | 42 | 0.021 | |
| methylation | GO:0032259 | 47 | 0.020 | |
| regulation of anatomical structure size | GO:0090066 | 163 | 0.020 | Zebrafish |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.020 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.020 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.020 | |
| cell recognition | GO:0008037 | 102 | 0.020 | |
| positive regulation of wnt signaling pathway | GO:0030177 | 25 | 0.020 | |
| golgi organization | GO:0007030 | 66 | 0.020 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.020 | |
| cell adhesion | GO:0007155 | 136 | 0.020 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.019 | Zebrafish |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.019 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.019 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.019 | Zebrafish |
| regulation of axon extension | GO:0030516 | 8 | 0.019 | Zebrafish |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.019 | |
| regulation of ras gtpase activity | GO:0032318 | 38 | 0.018 | |
| taxis | GO:0042330 | 304 | 0.018 | Zebrafish Fly |
| intracellular transport | GO:0046907 | 228 | 0.018 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.018 | Zebrafish |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.018 | |
| mesoderm morphogenesis | GO:0048332 | 22 | 0.017 | Mouse |
| phosphorylation | GO:0016310 | 294 | 0.017 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.017 | |
| protein secretion | GO:0009306 | 45 | 0.017 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.017 | Fly |
| lipid storage | GO:0019915 | 38 | 0.017 | |
| imaginal disc derived wing vein morphogenesis | GO:0008586 | 44 | 0.017 | |
| protein phosphorylation | GO:0006468 | 169 | 0.017 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.016 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.016 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.016 | Fly |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.016 | |
| organic substance transport | GO:0071702 | 257 | 0.016 | |
| endomembrane system organization | GO:0010256 | 119 | 0.016 | |
| chaeta morphogenesis | GO:0008407 | 42 | 0.016 | |
| regulation of histone modification | GO:0031056 | 20 | 0.016 | |
| cellular response to endogenous stimulus | GO:0071495 | 80 | 0.016 | Zebrafish |
| negative regulation of cell division | GO:0051782 | 17 | 0.015 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.015 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.015 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.015 | |
| chitin based cuticle development | GO:0040003 | 49 | 0.015 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.015 | |
| protein heterooligomerization | GO:0051291 | 4 | 0.015 | |
| regulation of wnt signaling pathway | GO:0030111 | 68 | 0.015 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.015 | |
| rna localization | GO:0006403 | 115 | 0.014 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.014 | |
| regulation of localization | GO:0032879 | 275 | 0.014 | |
| positive regulation of organelle organization | GO:0010638 | 65 | 0.014 | |
| regulation of axonogenesis | GO:0050770 | 32 | 0.014 | Zebrafish |
| regulation of catalytic activity | GO:0050790 | 185 | 0.014 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.014 | |
| stem cell division | GO:0017145 | 69 | 0.014 | |
| single organism membrane budding | GO:1902591 | 2 | 0.014 | |
| axon extension | GO:0048675 | 32 | 0.013 | Zebrafish |
| formation of primary germ layer | GO:0001704 | 24 | 0.013 | Mouse |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.013 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.013 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.013 | |
| pigment biosynthetic process | GO:0046148 | 36 | 0.013 | |
| leg disc morphogenesis | GO:0007478 | 80 | 0.013 | |
| phosphatidylinositol mediated signaling | GO:0048015 | 4 | 0.013 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.013 | |
| endodermal cell fate commitment | GO:0001711 | 3 | 0.013 | |
| notch signaling pathway | GO:0007219 | 120 | 0.013 | |
| regulation of intracellular transport | GO:0032386 | 64 | 0.012 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.012 | |
| dna metabolic process | GO:0006259 | 227 | 0.012 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.012 | |
| synaptic target recognition | GO:0008039 | 45 | 0.012 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.012 | |
| protein transport | GO:0015031 | 155 | 0.012 | |
| inter male aggressive behavior | GO:0002121 | 60 | 0.012 | |
| limb development | GO:0060173 | 1 | 0.012 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 41 | 0.012 | |
| protein glycosylation | GO:0006486 | 32 | 0.012 | |
| eye pigmentation | GO:0048069 | 43 | 0.012 | |
| mesenchymal cell differentiation | GO:0048762 | 1 | 0.012 | |
| response to organic substance | GO:0010033 | 284 | 0.012 | Zebrafish |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.011 | |
| muscle cell fate commitment | GO:0042693 | 14 | 0.011 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.011 | |
| morphogenesis of a branching structure | GO:0001763 | 45 | 0.011 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.011 | |
| oviposition | GO:0018991 | 19 | 0.011 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.011 | |
| negative regulation of organelle organization | GO:0010639 | 56 | 0.011 | |
| pigment metabolic process | GO:0042440 | 84 | 0.011 | |
| regulation of immune system process | GO:0002682 | 176 | 0.011 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.011 | |
| cellular lipid metabolic process | GO:0044255 | 83 | 0.011 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.011 | |
| secretion by cell | GO:0032940 | 101 | 0.011 | |
| pigmentation | GO:0043473 | 75 | 0.011 | |
| decapentaplegic signaling pathway | GO:0008101 | 19 | 0.011 | |
| brain development | GO:0007420 | 120 | 0.011 | |
| peptidyl threonine modification | GO:0018210 | 3 | 0.011 | |
| limb morphogenesis | GO:0035108 | 1 | 0.011 | |
| cell fate specification | GO:0001708 | 71 | 0.011 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.010 | |
| negative regulation of catabolic process | GO:0009895 | 36 | 0.010 | |
| epithelial cell migration | GO:0010631 | 148 | 0.010 | |
| spinal cord development | GO:0021510 | 1 | 0.010 | |
| cation transport | GO:0006812 | 110 | 0.010 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.010 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.010 | |
| protein maturation | GO:0051604 | 71 | 0.010 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.010 | |