| mrna metabolic process | GO:0016071 | 124 | 0.469 | |
| cell proliferation | GO:0008283 | 299 | 0.406 | |
| mrna processing | GO:0006397 | 104 | 0.303 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.281 | |
| nuclear division | GO:0000280 | 332 | 0.270 | |
| organelle fission | GO:0048285 | 340 | 0.267 | |
| regulation of meiosis | GO:0040020 | 3 | 0.235 | |
| chromatin modification | GO:0016568 | 147 | 0.181 | |
| chromatin organization | GO:0006325 | 207 | 0.178 | |
| chromosome organization | GO:0051276 | 360 | 0.143 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.137 | Worm |
| protein modification process | GO:0036211 | 438 | 0.137 | |
| histone modification | GO:0016570 | 106 | 0.132 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.129 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.126 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.098 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.094 | Worm |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.094 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.093 | |
| cell motility | GO:0048870 | 251 | 0.092 | |
| rna splicing | GO:0008380 | 83 | 0.085 | |
| rna processing | GO:0006396 | 147 | 0.085 | |
| endocytosis | GO:0006897 | 310 | 0.084 | |
| organelle assembly | GO:0070925 | 198 | 0.074 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.074 | |
| dna conformation change | GO:0071103 | 105 | 0.073 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.069 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.065 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.063 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.059 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.058 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.058 | |
| regulation of cell death | GO:0010941 | 173 | 0.055 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.050 | |
| regionalization | GO:0003002 | 416 | 0.048 | |
| centrosome organization | GO:0051297 | 163 | 0.047 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.047 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.047 | |
| phosphorylation | GO:0016310 | 294 | 0.047 | |
| positive regulation of transcription from rna polymerase i promoter | GO:0045943 | 3 | 0.046 | |
| cellular protein modification process | GO:0006464 | 438 | 0.044 | |
| histone methylation | GO:0016571 | 40 | 0.043 | |
| localization of cell | GO:0051674 | 257 | 0.043 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.039 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.038 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.037 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.036 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.034 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.033 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.032 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.031 | |
| phagocytosis | GO:0006909 | 215 | 0.031 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.031 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.030 | |
| programmed cell death | GO:0012501 | 257 | 0.030 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.029 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.029 | |
| cell migration | GO:0016477 | 238 | 0.028 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.028 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.027 | |
| dna packaging | GO:0006323 | 91 | 0.027 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.026 | |
| regulation of rac gtpase activity | GO:0032314 | 1 | 0.026 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.026 | |
| cell death | GO:0008219 | 279 | 0.026 | |
| spindle organization | GO:0007051 | 253 | 0.025 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.025 | |
| mitochondrial membrane organization | GO:0007006 | 3 | 0.025 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.025 | Worm |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.025 | |
| death | GO:0016265 | 284 | 0.024 | |
| cell division | GO:0051301 | 248 | 0.023 | |
| spindle assembly involved in mitosis | GO:0090307 | 50 | 0.023 | |
| peptidyl lysine methylation | GO:0018022 | 16 | 0.023 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.023 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.023 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.023 | |
| regulation of chromatin organization | GO:1902275 | 32 | 0.022 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.021 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.021 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.021 | |
| rna localization | GO:0006403 | 115 | 0.021 | |
| regulation of cell division | GO:0051302 | 72 | 0.020 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.020 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.020 | |
| positive regulation of organelle organization | GO:0010638 | 65 | 0.020 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.019 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.019 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.019 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.019 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.019 | |
| regulation of response to stress | GO:0080134 | 200 | 0.019 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.019 | |
| regulation of cell development | GO:0060284 | 215 | 0.018 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.018 | |
| peptidyl lysine trimethylation | GO:0018023 | 6 | 0.018 | |
| centrosome cycle | GO:0007098 | 137 | 0.017 | |
| intracellular transport | GO:0046907 | 228 | 0.017 | |
| rna catabolic process | GO:0006401 | 37 | 0.017 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.017 | |
| mrna transport | GO:0051028 | 15 | 0.017 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.016 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 45 | 0.016 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.016 | |
| regulation of cell shape | GO:0008360 | 113 | 0.016 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.015 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.015 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.014 | |
| regulation of chromatin modification | GO:1903308 | 28 | 0.014 | |
| catabolic process | GO:0009056 | 409 | 0.014 | |
| regulation of transcription from rna polymerase i promoter | GO:0006356 | 4 | 0.014 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.014 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.014 | |
| cellular lipid metabolic process | GO:0044255 | 83 | 0.014 | |
| larval development | GO:0002164 | 104 | 0.013 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.013 | |
| chromatin remodeling | GO:0006338 | 72 | 0.013 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.013 | |
| spindle assembly | GO:0051225 | 80 | 0.013 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.013 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.013 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.012 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.012 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.012 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.012 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.012 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.012 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.012 | |
| actin filament based process | GO:0030029 | 220 | 0.012 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.011 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.011 | |
| microtubule cytoskeleton organization involved in mitosis | GO:1902850 | 52 | 0.011 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.011 | |
| developmental maturation | GO:0021700 | 172 | 0.011 | |
| regulation of histone modification | GO:0031056 | 20 | 0.011 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.011 | |
| positive regulation of binding | GO:0051099 | 4 | 0.011 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.011 | |
| negative regulation of apoptotic process | GO:0043066 | 63 | 0.011 | |
| protein alkylation | GO:0008213 | 43 | 0.011 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.011 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.010 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.010 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.010 | |
| mitotic cytokinesis | GO:0000281 | 50 | 0.010 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.010 | |
| regulation of meiotic cell cycle | GO:0051445 | 9 | 0.010 | Worm |
| dna alkylation | GO:0006305 | 4 | 0.010 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.010 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.010 | |
