Drosophila melanogaster

152 known processes

sqd (Dmel_CG16901)

squid

(Aliases: l(3)j4B4,l(3)j8E7,hrp40,CG16901,Squid,hnRNP 1,fs(3)00048,HRP40,l(3)j6E3,Rbp3,CG17791,Hrb87,Dmel\CG16901,Hrb87Fb,RRM3,l(3)EP3631,Hrp40,rrm3,Sqd)

sqd biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
pole plasm mrna localizationGO:0019094491.000
oocyte developmentGO:00485991241.000
oocyte differentiationGO:00099941451.000
pole plasm rna localizationGO:0007316521.000
oocyte axis specificationGO:00073091081.000
oocyte anterior posterior axis specificationGO:0007314721.000
oocyte constructionGO:00073081121.000
pole plasm assemblyGO:0007315611.000
oocyte microtubule cytoskeleton organizationGO:0016325351.000
pole plasm oskar mrna localizationGO:0045451461.000
cell maturationGO:00484691440.999
axis specificationGO:00097981670.999
intracellular mrna localization involved in anterior posterior axis specificationGO:0060811530.999
cytoplasm organizationGO:0007028640.999
germarium derived oocyte fate determinationGO:0007294260.998
maternal determination of anterior posterior axis embryoGO:0008358740.998
oocyte nucleus localization involved in oocyte dorsal ventral axis specificationGO:0051663120.996
intracellular mrna localizationGO:0008298660.994
oocyte localization involved in germarium derived egg chamber formationGO:0030720120.992
embryonic axis specificationGO:00005781070.992
regulation of pole plasm oskar mrna localizationGO:0007317270.990
Fly
segmentationGO:00352822070.989
embryonic pattern specificationGO:00098801740.986
anterior posterior axis specificationGO:00099481090.982
oocyte dorsal ventral axis specificationGO:0007310340.981
dorsal appendage formationGO:0046843470.979
blastoderm segmentationGO:00073501590.971
anterior posterior axis specification embryoGO:00085951030.970
chorion containing eggshell formationGO:00073041050.969
eggshell chorion assemblyGO:0007306660.968
anterior posterior pattern specificationGO:00099521360.968
intracellular mrna localization involved in pattern specification processGO:0060810560.966
developmental maturationGO:00217001720.966
regulation of oocyte developmentGO:0060281270.963
Fly
oocyte microtubule cytoskeleton polarizationGO:0008103220.960
tripartite regional subdivisionGO:00073511030.954
rna localizationGO:00064031150.951
dorsal ventral axis specificationGO:0009950660.947
establishment of oocyte nucleus localization involved in oocyte dorsal ventral axis specificationGO:003072260.924
dorsal ventral axis specification ovarian follicular epitheliumGO:0008069130.906
germarium derived egg chamber formationGO:00072931010.901
germarium derived oocyte differentiationGO:0030706290.889
translationGO:0006412690.887
Human Fly
eggshell formationGO:00307031050.879
single organism cellular localizationGO:19025801800.875
regionalizationGO:00030024160.854
cell divisionGO:00513012480.841
Fly
oocyte fate determinationGO:0030716270.835
cytoplasmic transport nurse cell to oocyteGO:0007303120.825
establishment or maintenance of microtubule cytoskeleton polarityGO:0030951410.812
negative regulation of macromolecule biosynthetic processGO:00105582700.722
Mouse Fly
dorsal ventral pattern formationGO:00099531330.712
regulation of multi organism processGO:00439001310.694
Fly
establishment or maintenance of cytoskeleton polarityGO:0030952440.670
regulation of cell maturationGO:1903429270.641
Fly
regulation of translationGO:0006417560.624
Human Fly
establishment or maintenance of cell polarityGO:00071631670.610
morphogenesis of follicular epitheliumGO:0016333360.606
negative regulation of translationGO:0017148280.598
Fly
regulation of embryonic pattern specificationGO:1902875270.580
Fly
chorion containing eggshell pattern formationGO:0030381110.554
cellular macromolecule localizationGO:00707272200.526
regulation of cell cycleGO:00517262910.444
establishment or maintenance of polarity of follicular epitheliumGO:0016334260.423
negative regulation of biosynthetic processGO:00098902770.371
Mouse Fly
negative regulation of cellular macromolecule biosynthetic processGO:20001132670.335
Mouse Fly
female meiotic divisionGO:0007143700.317
response to abiotic stimulusGO:00096283410.314
Fly
regulation of oskar mrna translationGO:004601180.311
mrna processingGO:00063971040.284
negative regulation of gene expressionGO:00106293870.270
ribonucleoprotein complex subunit organizationGO:0071826280.270
negative regulation of cell cycle processGO:00109481090.259
posttranscriptional regulation of gene expressionGO:00106081450.256
Human Mouse Rat Fly
mitotic g2 dna damage checkpointGO:0007095690.255
negative regulation of cellular metabolic processGO:00313243820.255
organelle localizationGO:00516401480.254
development of primary sexual characteristicsGO:0045137500.242
regulation of rna splicingGO:0043484690.232
gonad developmentGO:0008406500.231
cystoblast divisionGO:0007282100.229
meiotic cell cycle processGO:19030461320.221
negative regulation of nitrogen compound metabolic processGO:00511722650.215
wing disc morphogenesisGO:00074723440.214
rna catabolic processGO:0006401370.213
negative regulation of cellular biosynthetic processGO:00313272770.212
Mouse Fly
regulation of mrna splicing via spliceosomeGO:0048024640.210
cellular component assembly involved in morphogenesisGO:00109271510.207
rna splicingGO:0008380830.203
cell fate determinationGO:0001709910.192
regulation of mrna metabolic processGO:1903311720.187
tracheal outgrowth open tracheal systemGO:0007426180.186
response to biotic stimulusGO:00096072940.186
ovarian fusome organizationGO:0030723110.180
mrna metabolic processGO:00160711240.172
alternative mrna splicing via spliceosomeGO:0000380600.169
germ line cyst formationGO:0048134440.163
karyosome formationGO:0030717220.162
response to other organismGO:00517072930.158
germarium derived female germ line cyst formationGO:0030727420.152
positive regulation of gene expressionGO:00106282900.146
Human Mouse Fly
maternal specification of dorsal ventral axis oocyte germ line encodedGO:000731140.143
skeletal muscle organ developmentGO:0060538480.139
negative regulation of nucleic acid templated transcriptionGO:19035072400.138
Mouse
regulation of embryonic developmentGO:0045995680.133
Fly
regulation of mrna processingGO:0050684710.133
intracellular transportGO:00469072280.125
post embryonic appendage morphogenesisGO:00351203850.124
epithelial cell morphogenesis involved in gastrulationGO:000338170.124
regulation of nurse cell apoptotic processGO:004547790.124
mrna splicing via spliceosomeGO:0000398730.123
apical constriction involved in gastrulationGO:000338470.123
ovarian follicle cell developmentGO:00307072480.122
growthGO:00400073590.121
regulation of developmental growthGO:00486381740.114
fusome organizationGO:0045478130.113
gene silencing by rnaGO:0031047570.113
single fertilizationGO:0007338240.109
branching involved in open tracheal system developmentGO:0060446450.099
regulation of alternative mrna splicing via spliceosomeGO:0000381600.096
nucleus localizationGO:0051647340.094
terminal region determinationGO:0007362250.093
regulation of meiosisGO:004002030.092
positive regulation of translationGO:0045727120.091
Human Fly
phosphorylationGO:00163102940.090
columnar cuboidal epithelial cell differentiationGO:00020652560.088
appendage morphogenesisGO:00351073970.087
regulation of cellular protein metabolic processGO:00322682430.085
Human Fly
mitotic spindle organizationGO:00070522200.081
apoptotic processGO:00069151590.081
pronuclear migrationGO:003504640.080
dna biosynthetic processGO:0071897240.080
organelle fissionGO:00482853400.079
rna splicing via transesterification reactions with bulged adenosine as nucleophileGO:0000377730.078
epithelial cell developmentGO:00020642740.077
female germ line cyst formationGO:0048135420.076
nucleobase containing compound catabolic processGO:00346551650.075
negative regulation of rna metabolic processGO:00512532510.072
axon guidanceGO:00074112330.071
Fly
eye photoreceptor cell fate commitmentGO:0042706370.070
regulation of response to stressGO:00801342000.069
negative regulation of response to stimulusGO:00485852580.067
peptidyl threonine phosphorylationGO:001810720.066
genitalia developmentGO:0048806260.065
meiotic cell cycleGO:00513211710.064
regulation of wound healingGO:0061041130.064
appendage developmentGO:00487364010.062
positive regulation of signalingGO:00230562430.062
negative regulation of cell cycleGO:00457861160.061
negative regulation of cellular protein metabolic processGO:0032269850.060
Fly
meiotic nuclear divisionGO:00071261510.060
cell deathGO:00082192790.060
nuclear migrationGO:0007097200.059
rna splicing via transesterification reactionsGO:0000375730.058
spindle assembly involved in female meiosisGO:0007056140.057
compound eye morphogenesisGO:00017452490.057
nuclear envelope organizationGO:000699870.055
intracellular signal transductionGO:00355563000.055
branching morphogenesis of an epithelial tubeGO:0048754450.054
rna processingGO:00063961470.052
protein modification processGO:00362114380.050
r3 r4 cell fate commitmentGO:0007464100.049
fertilizationGO:0009566260.048
chromosome organization involved in meiosisGO:0070192100.048
negative regulation of nucleobase containing compound metabolic processGO:00459342610.048
posttranscriptional gene silencingGO:0016441460.047
negative regulation of cell communicationGO:00106482230.047
response to bacteriumGO:00096171980.046
nucleus organizationGO:0006997450.046
defense responseGO:00069523000.046
regulation of reproductive processGO:2000241540.045
Fly
gene silencingGO:00164581380.045
nucleoside metabolic processGO:00091161270.044
regulation of cardiac cell fate specificationGO:200004380.044
membrane organizationGO:00610241120.043
tube morphogenesisGO:00352391910.043
olfactory behaviorGO:0042048970.042
dna repairGO:0006281540.042
compound eye developmentGO:00487493070.042
regulation of cell cycle processGO:00105641810.041
columnar cuboidal epithelial cell developmentGO:00020662490.041
ribonucleoprotein complex assemblyGO:0022618230.041
mitotic cell cycle checkpointGO:0007093880.040
regulation of protein metabolic processGO:00512462560.040
Human Fly
meiosis iGO:0007127590.039
positive regulation of nitrogen compound metabolic processGO:00511733540.039
Mouse
reproductive structure developmentGO:0048608740.039
protein processingGO:0016485680.038
spindle organizationGO:00070512530.038
negative regulation of cell differentiationGO:00455961430.037
Fly
single organism membrane organizationGO:0044802930.036
cellular ketone metabolic processGO:0042180240.036
mitotic nuclear divisionGO:00070672130.036
compound eye photoreceptor cell differentiationGO:00017511400.036
nuclear divisionGO:00002803320.035
morphogenesis of an epitheliumGO:00020092760.035
programmed cell deathGO:00125012570.034
secondary branching open tracheal systemGO:000742920.034
positive regulation of nucleic acid templated transcriptionGO:19035082660.034
Mouse
negative regulation of cell cycle phase transitionGO:19019881030.034
organelle assemblyGO:00709251980.034
innate immune responseGO:00450871440.033
habituationGO:0046959100.033
spliceosomal complex assemblyGO:000024510.033
microtubule organizing center organizationGO:00310231680.032
multi organism reproductive behaviorGO:00447051210.032
negative regulation of oskar mrna translationGO:000731950.032
protein phosphorylationGO:00064681690.032
negative regulation of rna biosynthetic processGO:19026792400.032
Mouse
regulation of cell differentiationGO:00455953020.031
Fly
chemotaxisGO:00069352490.031
Fly
immune response regulating signaling pathwayGO:000276420.031
positive regulation of mrna catabolic processGO:006101450.030
regulation of mitotic cell cycleGO:00073461900.029
regulation of meiotic cell cycleGO:005144590.029
regulation of establishment of protein localizationGO:0070201610.029
phagocytosisGO:00069092150.029
rna transportGO:0050658460.028
tissue morphogenesisGO:00487292970.028
establishment of nucleus localizationGO:0040023260.028
negative regulation of meiotic cell cycleGO:005144720.028
meiotic chromosome segregationGO:0045132590.028
positive regulation of biosynthetic processGO:00098913160.028
Human Mouse Fly
lipid phosphorylationGO:0046834110.028
negative regulation of mitotic cell cycle phase transitionGO:19019911030.028
response to fungusGO:0009620500.027
defense response to bacteriumGO:00427421780.027
mrna catabolic processGO:0006402330.027
cytokinesisGO:0000910900.027
sex differentiationGO:0007548810.026
glycolipid biosynthetic processGO:000924770.026
respiratory system developmentGO:00605412130.026
regulation of mitotic cell cycle phase transitionGO:19019901300.026
extrinsic apoptotic signaling pathwayGO:009719110.025
ribonucleoside triphosphate catabolic processGO:00092031080.025
digestive tract morphogenesisGO:00485461270.025
macromolecular complex assemblyGO:00650032560.025
posttranscriptional gene silencing by rnaGO:0035194450.024
regulation of proteolysis involved in cellular protein catabolic processGO:1903050440.024
branch fusion open tracheal systemGO:0035147170.024
female germ line stem cell maintenanceGO:003609980.024
bicoid mrna localizationGO:004545080.023
cardioblast cell fate specificationGO:004268590.023
positive regulation of macromolecule biosynthetic processGO:00105572830.023
Human Mouse Fly
cell proliferationGO:00082832990.022
actin cytoskeleton organizationGO:00300362060.022
positive regulation of rna biosynthetic processGO:19026802660.022
Mouse
regulation of phosphorylationGO:00423251470.022
cellular response to chemical stimulusGO:00708871990.022
Fly
catabolic processGO:00090564090.022
regulation of phosphatidylinositol 3 kinase activityGO:004355120.021
regulation of actin filament lengthGO:0030832270.021
muscle structure developmentGO:00610612240.021
ribonucleoprotein complex biogenesisGO:0022613310.021
adherens junction assemblyGO:0034333110.021
endocytosisGO:00068973100.021
chaeta developmentGO:0022416970.021
Fly
cell cycle checkpointGO:0000075950.021
deathGO:00162652840.021
nucleoside triphosphate catabolic processGO:00091431080.020
regulation of apoptotic processGO:00429811300.020
body morphogenesisGO:001017120.020
organic acid metabolic processGO:00060821030.020
regulation of cellular component sizeGO:0032535980.020
muscle organ developmentGO:00075171270.020
regulation of programmed cell deathGO:00430671520.020
negative regulation of mitotic cell cycleGO:00459301090.020
organonitrogen compound metabolic processGO:19015643180.020
reproductive system developmentGO:0061458740.020
imaginal disc derived appendage morphogenesisGO:00351143950.019
regulation of defense responseGO:00313471020.019
nuclear transcribed mrna catabolic process nonsense mediated decayGO:000018480.019
defense response to other organismGO:00985422250.019
morphogenesis of a branching structureGO:0001763450.019
imaginal disc derived wing morphogenesisGO:00074763370.019
activation of innate immune responseGO:000221840.018
positive regulation of neuron apoptotic processGO:004352510.018
cell cell signaling involved in cell fate commitmentGO:00451682100.018
Fly
establishment of cell polarityGO:0030010400.018
determination of adult lifespanGO:00083401370.018
imaginal disc pattern formationGO:0007447910.018
heart developmentGO:0007507820.018
aromatic compound catabolic processGO:00194391660.018
compound eye cone cell differentiationGO:0042675130.018
regulation of nervous system developmentGO:00519602480.018
developmental programmed cell deathGO:00106231380.018
regulation of transcription from rna polymerase ii promoterGO:00063573780.017
Mouse
peptidyl threonine modificationGO:001821030.017
phosphatidylinositol phosphorylationGO:0046854100.017
regulation of muscle tissue developmentGO:190186150.017
ribonucleoside triphosphate metabolic processGO:00091991190.017
meiotic chromosome condensationGO:001003230.017
negative regulation of cellular component organizationGO:00511291080.017
regulation of mrna catabolic processGO:006101350.017
vesicle mediated transportGO:00161923810.017
dna metabolic processGO:00062592270.017
regulation of multicellular organism growthGO:0040014400.016
regulation of transportGO:00510491810.016
regulation of hemocyte proliferationGO:0035206370.016
immune response activating signal transductionGO:000275720.016
regulation of intracellular transportGO:0032386640.016
skeletal muscle fiber developmentGO:004874130.016
eye morphogenesisGO:00485922600.016
gastrulationGO:0007369700.016
response to external biotic stimulusGO:00432072930.015
synaptic growth at neuromuscular junctionGO:00511241190.015
regulation of actin filament polymerizationGO:0030833250.015
olfactory learningGO:0008355560.015
eggshell chorion gene amplificationGO:000730790.015
mitotic dna integrity checkpointGO:0044774750.015
border follicle cell migrationGO:00072981130.015
Fly
negative regulation of protein modification processGO:0031400290.015
regulation of cell divisionGO:0051302720.015
protein complex assemblyGO:00064612000.015
regulation of growthGO:00400082330.015
developmental growthGO:00485892800.014
embryonic epithelial tube formationGO:000183860.014
delaminationGO:006023280.014
regulation of localizationGO:00328792750.014
Fly
regulation of molecular functionGO:00650092170.014
regulation of catabolic processGO:00098941700.014
organonitrogen compound biosynthetic processGO:19015661170.014
muscle fiber developmentGO:0048747120.014
asymmetric cell divisionGO:0008356370.014
positive regulation of signal transductionGO:00099672230.014
digestive tract developmentGO:00485651490.014
small molecule metabolic processGO:00442813050.014
eye developmentGO:00016543230.014
organic substance catabolic processGO:19015753080.013
male gamete generationGO:00482322010.013
establishment of localization in cellGO:00516494020.013
gene silencing by mirnaGO:0035195220.013
positive regulation of response to stimulusGO:00485843230.013
dendrite morphogenesisGO:00488131990.013
transcription from rna polymerase ii promoterGO:00063663680.013
Mouse
protein complex localizationGO:003150340.013
regulation of epidermal cell differentiationGO:004560430.013
dendrite developmentGO:00163582040.013
developmental growth involved in morphogenesisGO:0060560650.013
unidimensional cell growthGO:0009826150.013
regulation of cell junction assemblyGO:190188820.013
cellular response to dna damage stimulusGO:00069742230.013
mitochondrion organizationGO:0007005650.012
protein localizationGO:00081042840.012
tube developmentGO:00352952440.012
photoreceptor cell developmentGO:0042461960.012
germarium derived female germ line cyst encapsulationGO:003070880.012
cellular response to oxygen containing compoundGO:1901701790.012
regulation of multicellular organismal developmentGO:20000264140.012
Fly
germ line stem cell maintenanceGO:0030718500.012
negative regulation of signal transductionGO:00099682060.012
protein kinase b signalingGO:004349110.012
muscle cell fate commitmentGO:0042693140.012
regulation of double strand break repairGO:200077930.012
regulation of proteasomal ubiquitin dependent protein catabolic processGO:0032434370.012
centrosome organizationGO:00512971630.012
purine ribonucleoside catabolic processGO:00461301120.012
erk1 and erk2 cascadeGO:0070371390.012
positive regulation of intracellular signal transductionGO:19025331160.012
imaginal disc derived appendage developmentGO:00487373990.012
epithelial cell cell adhesionGO:009013660.012
cellular response to decreased oxygen levelsGO:0036294300.012
Fly
nonassociative learningGO:0046958110.012
regulation of cellular amine metabolic processGO:003323830.011
organic cyclic compound catabolic processGO:19013611680.011
response to sterolGO:0036314340.011
larval developmentGO:00021641040.011
centrosome cycleGO:00070981370.011
negative regulation of molecular functionGO:0044092510.011
regulation of mapk cascadeGO:0043408920.011
skeletal muscle tissue developmentGO:0007519130.011
dorsal ventral pattern formation imaginal discGO:0007450510.011
cellular response to sterol depletionGO:007150130.011
axon developmentGO:00615642970.011
Fly
ribonucleoside catabolic processGO:00424541120.011
actin filament polymerizationGO:0030041270.011
oxoacid metabolic processGO:00434361030.011
female germ line stem cell asymmetric divisionGO:0048132140.011
nuclear transportGO:0051169720.011
negative regulation of growthGO:0045926840.011
inositol lipid mediated signalingGO:004801740.011
negative regulation of developmental processGO:00510932010.011
Fly
convergent extension involved in gastrulationGO:006002720.011
positive regulation of phosphorylationGO:0042327870.011
transmission of nerve impulseGO:0019226120.011
organophosphate catabolic processGO:00464341120.011
myotube cell developmentGO:001490430.011
nucleoside biosynthetic processGO:000916330.011
cellular nitrogen compound catabolic processGO:00442701650.011
regulation of cell cycle phase transitionGO:19019871300.011
targeting of mrna for destruction involved in rna interferenceGO:003042340.011
organophosphate metabolic processGO:00196371950.011
nucleoside triphosphate metabolic processGO:00091411200.010
response to oxygen containing compoundGO:19017002000.010
carbohydrate derivative catabolic processGO:19011361180.010
immune responseGO:00069552460.010
purine nucleoside metabolic processGO:00422781270.010
negative regulation of intracellular signal transductionGO:1902532570.010
long term memoryGO:0007616620.010
pole plasm protein localizationGO:0007318100.010
positive regulation of cell proliferationGO:0008284470.010
signal transduction by phosphorylationGO:00230141070.010
regulation of epithelial cell differentiationGO:003085640.010
histolysisGO:00075591020.010
cellular response to insulin stimulusGO:0032869280.010
learningGO:0007612750.010
positive regulation of intracellular transportGO:0032388420.010
rna 3 end processingGO:0031123450.010

sqd disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in fly and predicted with the fly functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
cancerDOID:16200.048
thoracic cancerDOID:509300.048
organ system cancerDOID:005068600.048
disease of cellular proliferationDOID:1456600.048
myopathyDOID:42300.021
Human
muscle tissue diseaseDOID:6600.021
Human
musculoskeletal system diseaseDOID:1700.021
Human
disease of anatomical entityDOID:700.021
Human
muscular diseaseDOID:008000000.021
Human
muscular dystrophyDOID:988400.021
Human
limb girdle muscular dystrophyDOID:1172400.021
Human