| rna processing | GO:0006396 | 147 | 0.162 | |
| gene silencing | GO:0016458 | 138 | 0.145 | |
| nuclear division | GO:0000280 | 332 | 0.144 | |
| rna localization | GO:0006403 | 115 | 0.140 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.124 | |
| mrna processing | GO:0006397 | 104 | 0.117 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.117 | |
| gastrulation | GO:0007369 | 70 | 0.113 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.096 | |
| gene silencing by rna | GO:0031047 | 57 | 0.092 | |
| cytokinesis | GO:0000910 | 90 | 0.090 | |
| intracellular transport | GO:0046907 | 228 | 0.089 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.087 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.083 | |
| regulation of meiosis | GO:0040020 | 3 | 0.080 | |
| immune system process | GO:0002376 | 347 | 0.073 | |
| organelle fission | GO:0048285 | 340 | 0.069 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.069 | |
| muscle organ development | GO:0007517 | 127 | 0.067 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.063 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.055 | |
| body morphogenesis | GO:0010171 | 2 | 0.055 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.054 | |
| establishment of rna localization | GO:0051236 | 47 | 0.051 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.051 | |
| regulation of molecular function | GO:0065009 | 217 | 0.048 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.048 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.047 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.046 | |
| regionalization | GO:0003002 | 416 | 0.046 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.044 | |
| germ cell migration | GO:0008354 | 43 | 0.044 | |
| localization of cell | GO:0051674 | 257 | 0.043 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.043 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.042 | |
| immune response | GO:0006955 | 246 | 0.040 | |
| mrna metabolic process | GO:0016071 | 124 | 0.040 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.040 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.038 | |
| histone h4 acetylation | GO:0043967 | 13 | 0.037 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.037 | |
| rna splicing | GO:0008380 | 83 | 0.037 | |
| rna capping | GO:0036260 | 1 | 0.036 | |
| rna interference | GO:0016246 | 27 | 0.036 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.035 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.035 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.034 | |
| chromatin remodeling | GO:0006338 | 72 | 0.034 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.034 | |
| rna 3 end processing | GO:0031123 | 45 | 0.034 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.033 | |
| histone exchange | GO:0043486 | 21 | 0.033 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.031 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.030 | |
| cell proliferation | GO:0008283 | 299 | 0.029 | |
| oocyte axis specification | GO:0007309 | 108 | 0.029 | |
| intracellular mrna localization | GO:0008298 | 66 | 0.028 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.027 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.027 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.027 | |
| cellular response to ketone | GO:1901655 | 17 | 0.027 | |
| endocytosis | GO:0006897 | 310 | 0.027 | |
| wnt signaling pathway | GO:0016055 | 98 | 0.027 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.025 | |
| formation of primary germ layer | GO:0001704 | 24 | 0.025 | |
| gene silencing by mirna | GO:0035195 | 22 | 0.025 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.025 | |
| mrna 3 end processing | GO:0031124 | 28 | 0.025 | |
| tube morphogenesis | GO:0035239 | 191 | 0.024 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.024 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.024 | |
| camera type eye development | GO:0043010 | 4 | 0.024 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.023 | |
| morphogenesis of a branching structure | GO:0001763 | 45 | 0.023 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.023 | |
| cell adhesion | GO:0007155 | 136 | 0.023 | |
| organic substance transport | GO:0071702 | 257 | 0.023 | |
| cell migration | GO:0016477 | 238 | 0.023 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.022 | |
| translation | GO:0006412 | 69 | 0.022 | |
| nucleobase containing compound transport | GO:0015931 | 56 | 0.022 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.022 | |
| salivary gland development | GO:0007431 | 162 | 0.022 | |
| spindle organization | GO:0007051 | 253 | 0.022 | |
| dsrna fragmentation | GO:0031050 | 15 | 0.022 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.022 | |
| establishment of protein localization | GO:0045184 | 163 | 0.022 | |
| cell motility | GO:0048870 | 251 | 0.022 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.021 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.021 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.021 | |
| exocrine system development | GO:0035272 | 162 | 0.021 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.021 | |
| regulation of cell division | GO:0051302 | 72 | 0.020 | |
| gland development | GO:0048732 | 191 | 0.020 | |
| positive regulation of mrna metabolic process | GO:1903313 | 5 | 0.020 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.020 | |
| production of small rna involved in gene silencing by rna | GO:0070918 | 15 | 0.019 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.019 | |
| digestive tract development | GO:0048565 | 149 | 0.019 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.019 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.018 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.018 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.018 | |
| heterochromatin organization involved in chromatin silencing | GO:0070868 | 9 | 0.018 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.018 | |
| biological adhesion | GO:0022610 | 138 | 0.018 | |
| regulation of immune system process | GO:0002682 | 176 | 0.018 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.018 | |
| regulation of wnt signaling pathway | GO:0030111 | 68 | 0.018 | |
| phagocytosis | GO:0006909 | 215 | 0.017 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.017 | |
| digestive system development | GO:0055123 | 149 | 0.017 | |
| cellular catabolic process | GO:0044248 | 372 | 0.017 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.017 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.016 | |
| protein acylation | GO:0043543 | 42 | 0.016 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.016 | |
| defense response to other organism | GO:0098542 | 225 | 0.016 | |
| defense response to bacterium | GO:0042742 | 178 | 0.016 | |
| anterior posterior axis specification embryo | GO:0008595 | 103 | 0.016 | |
| notch signaling pathway | GO:0007219 | 120 | 0.016 | |
| oocyte development | GO:0048599 | 124 | 0.016 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.016 | |
| response to nutrient levels | GO:0031667 | 114 | 0.016 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.015 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.015 | |
| endomembrane system organization | GO:0010256 | 119 | 0.015 | |
| protein modification by small protein removal | GO:0070646 | 28 | 0.015 | |
| central nervous system development | GO:0007417 | 201 | 0.015 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 62 | 0.015 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.015 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.015 | |
| histone acetylation | GO:0016573 | 38 | 0.015 | |
| cell division | GO:0051301 | 248 | 0.014 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.014 | |
| purine ribonucleoside catabolic process | GO:0046130 | 112 | 0.014 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.014 | |
| morphogenesis of a branching epithelium | GO:0061138 | 45 | 0.014 | |
| gonad development | GO:0008406 | 50 | 0.014 | |
| axis specification | GO:0009798 | 167 | 0.014 | |
| regulation of embryonic development | GO:0045995 | 68 | 0.014 | |
| catabolic process | GO:0009056 | 409 | 0.014 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.014 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.013 | |
| homeostatic process | GO:0042592 | 199 | 0.013 | |
| nuclear transport | GO:0051169 | 72 | 0.013 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.013 | |
| rna transport | GO:0050658 | 46 | 0.013 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.013 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.013 | |
| histone h2a acetylation | GO:0043968 | 1 | 0.013 | |
| histone h4 k16 acetylation | GO:0043984 | 4 | 0.013 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.013 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.013 | |
| cell fate determination | GO:0001709 | 91 | 0.013 | |
| histone h3 k9 acetylation | GO:0043970 | 3 | 0.013 | |
| growth | GO:0040007 | 359 | 0.012 | |
| positive regulation of histone acetylation | GO:0035066 | 3 | 0.012 | |
| mapk cascade | GO:0000165 | 107 | 0.012 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.012 | |
| muscle structure development | GO:0061061 | 224 | 0.012 | |
| response to organic cyclic compound | GO:0014070 | 89 | 0.012 | |
| cellular response to oxygen containing compound | GO:1901701 | 79 | 0.012 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.012 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.012 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.012 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.012 | |
| neural retina development | GO:0003407 | 4 | 0.012 | |
| pigmentation | GO:0043473 | 75 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.011 | |
| organelle assembly | GO:0070925 | 198 | 0.011 | |
| sex differentiation | GO:0007548 | 81 | 0.011 | |
| regulation of epithelial cell differentiation | GO:0030856 | 4 | 0.011 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.011 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.011 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.011 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.011 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.011 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.011 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.010 | |
| production of sirna involved in rna interference | GO:0030422 | 11 | 0.010 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.010 | |
| carbohydrate metabolic process | GO:0005975 | 82 | 0.010 | |
| developmental growth | GO:0048589 | 280 | 0.010 | |
| organelle localization | GO:0051640 | 148 | 0.010 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.010 | |
| intracellular protein transport | GO:0006886 | 104 | 0.010 | |
| dendrite development | GO:0016358 | 204 | 0.010 | |
| cellular response to dsrna | GO:0071359 | 15 | 0.010 | |
