| proteolysis | GO:0006508 | 192 | 0.819 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.698 | |
| mitotic spindle elongation | GO:0000022 | 81 | 0.604 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.571 | Zebrafish |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.540 | Zebrafish |
| spindle organization | GO:0007051 | 253 | 0.531 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.440 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.372 | Zebrafish |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.329 | Zebrafish |
| nuclear division | GO:0000280 | 332 | 0.276 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.241 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.221 | Zebrafish |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.219 | Zebrafish |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.185 | Zebrafish |
| organelle fission | GO:0048285 | 340 | 0.182 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.174 | |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 37 | 0.172 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.162 | |
| spindle elongation | GO:0051231 | 83 | 0.160 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.143 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.130 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.125 | Worm |
| proteasome assembly | GO:0043248 | 2 | 0.113 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.105 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.104 | Worm |
| protein catabolic process | GO:0030163 | 101 | 0.093 | Zebrafish |
| body morphogenesis | GO:0010171 | 2 | 0.093 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 20 | 0.092 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.090 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.086 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 20 | 0.084 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.083 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.083 | Zebrafish |
| macromolecular complex assembly | GO:0065003 | 256 | 0.082 | |
| catabolic process | GO:0009056 | 409 | 0.078 | Zebrafish |
| cell proliferation | GO:0008283 | 299 | 0.075 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.073 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.073 | |
| spindle assembly | GO:0051225 | 80 | 0.072 | |
| microtubule cytoskeleton organization involved in mitosis | GO:1902850 | 52 | 0.068 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.066 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.058 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.058 | |
| organelle assembly | GO:0070925 | 198 | 0.058 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.057 | Worm |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.054 | |
| spindle assembly involved in mitosis | GO:0090307 | 50 | 0.053 | |
| forebrain development | GO:0030900 | 2 | 0.053 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.052 | Zebrafish |
| negative regulation of gene expression | GO:0010629 | 387 | 0.049 | |
| protein modification process | GO:0036211 | 438 | 0.046 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.046 | |
| regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045898 | 1 | 0.044 | |
| lateral inhibition | GO:0046331 | 206 | 0.044 | |
| dna repair | GO:0006281 | 54 | 0.042 | |
| death | GO:0016265 | 284 | 0.042 | Worm |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 44 | 0.042 | |
| positive regulation of proteolysis involved in cellular protein catabolic process | GO:1903052 | 24 | 0.041 | |
| protein complex assembly | GO:0006461 | 200 | 0.041 | |
| apoptotic process | GO:0006915 | 159 | 0.040 | Worm |
| nucleoside metabolic process | GO:0009116 | 127 | 0.038 | |
| aging | GO:0007568 | 143 | 0.037 | Worm |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 50 | 0.037 | |
| compound eye photoreceptor development | GO:0042051 | 78 | 0.036 | |
| positive regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032436 | 19 | 0.036 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.036 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.035 | |
| atp metabolic process | GO:0046034 | 49 | 0.035 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.034 | |
| positive regulation of proteasomal protein catabolic process | GO:1901800 | 20 | 0.033 | |
| regulation of proteasomal protein catabolic process | GO:0061136 | 39 | 0.033 | |
| cellular protein modification process | GO:0006464 | 438 | 0.033 | |
| regulation of molecular function | GO:0065009 | 217 | 0.032 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 3 | 0.032 | |
| larval development | GO:0002164 | 104 | 0.031 | Worm |
| regulation of cell cycle | GO:0051726 | 291 | 0.031 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.029 | Zebrafish |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.029 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.029 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.029 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.028 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.028 | |
| cellular catabolic process | GO:0044248 | 372 | 0.027 | Zebrafish |
| programmed cell death | GO:0012501 | 257 | 0.027 | Worm |
| regionalization | GO:0003002 | 416 | 0.027 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.026 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.026 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.025 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.025 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.025 | |
| response to organic substance | GO:0010033 | 284 | 0.024 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.023 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.023 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.023 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.023 | |
| cell death | GO:0008219 | 279 | 0.022 | Worm |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.022 | |
| eye photoreceptor cell development | GO:0042462 | 81 | 0.022 | |
| eye development | GO:0001654 | 323 | 0.022 | Zebrafish |
| regulation of protein catabolic process | GO:0042176 | 55 | 0.021 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.021 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.020 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.020 | |
| protein ubiquitination | GO:0016567 | 70 | 0.020 | |
| endocytosis | GO:0006897 | 310 | 0.020 | |
| protein neddylation | GO:0045116 | 5 | 0.019 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.019 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.019 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.019 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.019 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.019 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.018 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.018 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.018 | |
| phagocytosis | GO:0006909 | 215 | 0.018 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.018 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.018 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.017 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.017 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.016 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 25 | 0.016 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 51 | 0.016 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.016 | |
| regulation of cell division | GO:0051302 | 72 | 0.016 | |
| regulation of endopeptidase activity | GO:0052548 | 36 | 0.016 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.016 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 119 | 0.016 | |
| dna templated transcription elongation | GO:0006354 | 18 | 0.016 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.015 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.015 | |
| positive regulation of peptidase activity | GO:0010952 | 29 | 0.015 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.015 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.015 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.015 | |
| synapse organization | GO:0050808 | 196 | 0.015 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.015 | |
| purine nucleoside metabolic process | GO:0042278 | 127 | 0.014 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 50 | 0.014 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.014 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.014 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.014 | |
| regulation of striated muscle contraction | GO:0006942 | 2 | 0.014 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.014 | |
| organic substance transport | GO:0071702 | 257 | 0.014 | |
| photoreceptor cell development | GO:0042461 | 96 | 0.014 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.013 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.013 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.013 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.013 | |
| positive regulation of protein catabolic process | GO:0045732 | 34 | 0.013 | |
| negative regulation of sequence specific dna binding transcription factor activity | GO:0043433 | 4 | 0.013 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.013 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.013 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.012 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.012 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.012 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.012 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 120 | 0.012 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.012 | |
| positive regulation of hydrolase activity | GO:0051345 | 78 | 0.012 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.012 | |
| positive regulation of protein complex assembly | GO:0031334 | 22 | 0.012 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 119 | 0.011 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.011 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.011 | |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.011 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 119 | 0.011 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.011 | |
| negative regulation of catabolic process | GO:0009895 | 36 | 0.011 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.011 | |
| regulation of peptidase activity | GO:0052547 | 39 | 0.011 | |
| protein processing | GO:0016485 | 68 | 0.011 | |
| positive regulation of endopeptidase activity | GO:0010950 | 26 | 0.011 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.010 | |
| mapk cascade | GO:0000165 | 107 | 0.010 | |
| protein localization | GO:0008104 | 284 | 0.010 | |
| dendrite development | GO:0016358 | 204 | 0.010 | |
| cell division | GO:0051301 | 248 | 0.010 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.010 | |
| positive regulation of binding | GO:0051099 | 4 | 0.010 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.010 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.010 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.010 | |
