| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.270 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.204 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.175 | |
| regulation of meiosis | GO:0040020 | 3 | 0.167 | Worm |
| negative regulation of gene expression | GO:0010629 | 387 | 0.112 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.108 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.102 | |
| cell proliferation | GO:0008283 | 299 | 0.102 | Worm |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.101 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.098 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.094 | |
| growth | GO:0040007 | 359 | 0.090 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.079 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.067 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.067 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.065 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.064 | |
| neurological system process | GO:0050877 | 358 | 0.061 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.061 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.061 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.061 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.056 | Worm |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.055 | Worm |
| gene silencing | GO:0016458 | 138 | 0.054 | |
| response to other organism | GO:0051707 | 293 | 0.054 | |
| cellular protein modification process | GO:0006464 | 438 | 0.050 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.048 | Yeast |
| cell death | GO:0008219 | 279 | 0.047 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.047 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.046 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.044 | |
| programmed cell death | GO:0012501 | 257 | 0.043 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.043 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.043 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.041 | |
| establishment of rna localization | GO:0051236 | 47 | 0.041 | |
| death | GO:0016265 | 284 | 0.040 | |
| protein modification process | GO:0036211 | 438 | 0.039 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.037 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.036 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.035 | |
| protein acylation | GO:0043543 | 42 | 0.035 | |
| chromatin modification | GO:0016568 | 147 | 0.035 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.034 | |
| spindle organization | GO:0007051 | 253 | 0.033 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.032 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.032 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.032 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.031 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.030 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.030 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.029 | |
| rna localization | GO:0006403 | 115 | 0.029 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.028 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.028 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.028 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.027 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.027 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.026 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.026 | |
| peptidyl lysine acetylation | GO:0018394 | 39 | 0.026 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.025 | |
| response to bacterium | GO:0009617 | 198 | 0.025 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.025 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.025 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.024 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.024 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.023 | |
| dna conformation change | GO:0071103 | 105 | 0.022 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.022 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.022 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.022 | |
| nucleobase containing compound transport | GO:0015931 | 56 | 0.022 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.022 | |
| amine metabolic process | GO:0009308 | 12 | 0.022 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.021 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.021 | |
| single organism cellular localization | GO:1902580 | 180 | 0.021 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.020 | |
| formation of a compartment boundary | GO:0060288 | 4 | 0.020 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.019 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.019 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.019 | |
| organelle fission | GO:0048285 | 340 | 0.019 | Worm |
| central nervous system development | GO:0007417 | 201 | 0.019 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.018 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.018 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.017 | Worm |
| chromosome organization | GO:0051276 | 360 | 0.017 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.017 | |
| proteolysis | GO:0006508 | 192 | 0.016 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.016 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.016 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.015 | |
| phagocytosis | GO:0006909 | 215 | 0.015 | |
| chromatin organization | GO:0006325 | 207 | 0.015 | |
| protein acetylation | GO:0006473 | 39 | 0.015 | |
| defense response | GO:0006952 | 300 | 0.015 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.015 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.015 | |
| apoptotic process | GO:0006915 | 159 | 0.015 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.015 | Yeast |
| regulation of apoptotic process | GO:0042981 | 130 | 0.015 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.014 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.014 | |
| endocytosis | GO:0006897 | 310 | 0.014 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.013 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.013 | |
| regionalization | GO:0003002 | 416 | 0.013 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.013 | |
| chromatin silencing | GO:0006342 | 76 | 0.013 | |
| mapk cascade | GO:0000165 | 107 | 0.013 | |
| negative regulation of purine nucleotide catabolic process | GO:0033122 | 1 | 0.013 | |
| tube development | GO:0035295 | 244 | 0.012 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.012 | |
| spermatogenesis | GO:0007283 | 200 | 0.012 | |
| mrna processing | GO:0006397 | 104 | 0.012 | Yeast |
| dendrite morphogenesis | GO:0048813 | 199 | 0.012 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.012 | |
| positive regulation of neuron projection regeneration | GO:0070572 | 3 | 0.012 | |
| regulation of ruffle assembly | GO:1900027 | 1 | 0.012 | |
| organic substance transport | GO:0071702 | 257 | 0.012 | |
| establishment or maintenance of polarity of larval imaginal disc epithelium | GO:0016336 | 3 | 0.011 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.011 | |
| regulation of vesicle mediated transport | GO:0060627 | 59 | 0.011 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.011 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.011 | Worm |
| rna transport | GO:0050658 | 46 | 0.011 | |
| male gamete generation | GO:0048232 | 201 | 0.011 | |
| response to temperature stimulus | GO:0009266 | 106 | 0.011 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.011 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.011 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.011 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.011 | |
| regulation of erk1 and erk2 cascade | GO:0070372 | 39 | 0.011 | |
| response to organonitrogen compound | GO:0010243 | 75 | 0.011 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.010 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.010 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.010 | Worm |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.010 | |
| protein catabolic process | GO:0030163 | 101 | 0.010 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.010 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.010 | |
