| cellular protein modification process | GO:0006464 | 438 | 0.185 | |
| chromosome organization | GO:0051276 | 360 | 0.184 | |
| protein modification process | GO:0036211 | 438 | 0.172 | |
| cell death | GO:0008219 | 279 | 0.168 | |
| chromatin remodeling | GO:0006338 | 72 | 0.157 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.145 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.141 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.134 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.134 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.133 | |
| protein acylation | GO:0043543 | 42 | 0.131 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.131 | |
| chromatin modification | GO:0016568 | 147 | 0.131 | |
| rna splicing | GO:0008380 | 83 | 0.127 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.127 | |
| regulation of cell death | GO:0010941 | 173 | 0.124 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.120 | |
| chromatin organization | GO:0006325 | 207 | 0.114 | |
| nuclear transport | GO:0051169 | 72 | 0.112 | Worm |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.110 | |
| cell proliferation | GO:0008283 | 299 | 0.106 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.105 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.103 | |
| apoptotic process | GO:0006915 | 159 | 0.100 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.099 | |
| death | GO:0016265 | 284 | 0.097 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.092 | |
| mitotic sister chromatid separation | GO:0051306 | 30 | 0.092 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.089 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.088 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.086 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.086 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.083 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.083 | |
| cell division | GO:0051301 | 248 | 0.082 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.082 | |
| mrna metabolic process | GO:0016071 | 124 | 0.079 | |
| protein phosphorylation | GO:0006468 | 169 | 0.079 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.079 | |
| dna metabolic process | GO:0006259 | 227 | 0.076 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.076 | |
| protein localization | GO:0008104 | 284 | 0.076 | |
| negative regulation of purine nucleotide catabolic process | GO:0033122 | 1 | 0.073 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.073 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.072 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.071 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.070 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.066 | |
| histone modification | GO:0016570 | 106 | 0.066 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.065 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.062 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.060 | |
| programmed cell death | GO:0012501 | 257 | 0.060 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.060 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.059 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.058 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.057 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.055 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.055 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.055 | |
| spindle organization | GO:0007051 | 253 | 0.055 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.054 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.053 | |
| gene silencing | GO:0016458 | 138 | 0.053 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.053 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.052 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.052 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.051 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.050 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.049 | |
| catabolic process | GO:0009056 | 409 | 0.049 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.049 | |
| protein acetylation | GO:0006473 | 39 | 0.048 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.048 | |
| protein transport | GO:0015031 | 155 | 0.048 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.048 | |
| regulation of mitotic sister chromatid segregation | GO:0033047 | 28 | 0.045 | |
| phosphorylation | GO:0016310 | 294 | 0.043 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.043 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.042 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.041 | |
| body morphogenesis | GO:0010171 | 2 | 0.041 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.040 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.039 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.038 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.037 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.037 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.037 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.036 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.036 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.035 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.035 | |
| organelle fission | GO:0048285 | 340 | 0.035 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.035 | |
| proteolysis | GO:0006508 | 192 | 0.035 | |
| peptidyl lysine methylation | GO:0018022 | 16 | 0.035 | |
| organic substance transport | GO:0071702 | 257 | 0.034 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.034 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.034 | |
| protein complex disassembly | GO:0043241 | 36 | 0.034 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.034 | Worm |
| amine metabolic process | GO:0009308 | 12 | 0.034 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.033 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.033 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.033 | |
| protein catabolic process | GO:0030163 | 101 | 0.032 | |
| negative regulation of apoptotic process | GO:0043066 | 63 | 0.032 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.032 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.032 | Worm |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 37 | 0.031 | |
| intracellular transport | GO:0046907 | 228 | 0.031 | Worm |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.031 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.030 | |
| protein complex assembly | GO:0006461 | 200 | 0.029 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.029 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.029 | |
| organelle assembly | GO:0070925 | 198 | 0.029 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.029 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.029 | |
| camera type eye development | GO:0043010 | 4 | 0.028 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.028 | |
| regulation of chromosome organization | GO:0033044 | 64 | 0.027 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.026 | |
| metaphase anaphase transition of cell cycle | GO:0044784 | 28 | 0.026 | |
| regionalization | GO:0003002 | 416 | 0.026 | |
| rna localization | GO:0006403 | 115 | 0.026 | |
| positive regulation of mitotic cell cycle | GO:0045931 | 34 | 0.026 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.026 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.025 | |
| negative regulation of organelle organization | GO:0010639 | 56 | 0.025 | |
| cellular catabolic process | GO:0044248 | 372 | 0.025 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.025 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.025 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.025 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.024 | Worm |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.024 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.024 | |
| chromatin assembly or disassembly | GO:0006333 | 52 | 0.024 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.023 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.023 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.023 | |
| cellular protein localization | GO:0034613 | 160 | 0.023 | |
| negative regulation of cell division | GO:0051782 | 17 | 0.023 | |
| peptidyl lysine acetylation | GO:0018394 | 39 | 0.023 | |
| histone acetylation | GO:0016573 | 38 | 0.022 | |
| mrna processing | GO:0006397 | 104 | 0.022 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.022 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.021 | |
| single organism behavior | GO:0044708 | 391 | 0.021 | |
| regulation of meiosis | GO:0040020 | 3 | 0.021 | |
| negative regulation of programmed cell death | GO:0043069 | 72 | 0.020 | |
| mitotic cytokinesis | GO:0000281 | 50 | 0.020 | |
| regulation of response to stress | GO:0080134 | 200 | 0.020 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.020 | |
| centrosome organization | GO:0051297 | 163 | 0.020 | |
| homeostatic process | GO:0042592 | 199 | 0.020 | |
| single organism cellular localization | GO:1902580 | 180 | 0.019 | |
| chromatin assembly | GO:0031497 | 48 | 0.019 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.019 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.018 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.018 | |
| chromosome segregation | GO:0007059 | 157 | 0.018 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.018 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.018 | |
| internal protein amino acid acetylation | GO:0006475 | 38 | 0.018 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.018 | |
| regulation of mitosis | GO:0007088 | 56 | 0.018 | |
| negative regulation of proteolysis involved in cellular protein catabolic process | GO:1903051 | 17 | 0.018 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.017 | |
| establishment of spindle orientation | GO:0051294 | 18 | 0.017 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.017 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.017 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.016 | |
| chromosome separation | GO:0051304 | 42 | 0.016 | |
| regulation of sister chromatid segregation | GO:0033045 | 28 | 0.016 | |
| regulation of dna metabolic process | GO:0051052 | 34 | 0.016 | |
| mrna transport | GO:0051028 | 15 | 0.016 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.016 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.016 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.015 | |
| regulation of proteasomal protein catabolic process | GO:0061136 | 39 | 0.015 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.015 | |
| larval development | GO:0002164 | 104 | 0.015 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.015 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.015 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.015 | |
| rna processing | GO:0006396 | 147 | 0.015 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.015 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.015 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.015 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.014 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.014 | |
| stem cell division | GO:0017145 | 69 | 0.014 | |
| regulation of chromosome segregation | GO:0051983 | 32 | 0.014 | |
| negative regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032435 | 16 | 0.014 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.014 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.014 | |
| response to anesthetic | GO:0072347 | 9 | 0.014 | |
| dna conformation change | GO:0071103 | 105 | 0.014 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.013 | Worm |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.013 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.013 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 81 | 0.013 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.013 | |
| dna packaging | GO:0006323 | 91 | 0.013 | |
| regulation of cell division | GO:0051302 | 72 | 0.013 | |
| immune system process | GO:0002376 | 347 | 0.013 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.013 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.013 | |
| cellular component disassembly | GO:0022411 | 46 | 0.013 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.013 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.013 | |
| chromatin silencing | GO:0006342 | 76 | 0.013 | |
| negative regulation of chromosome organization | GO:2001251 | 19 | 0.012 | |
| negative regulation of proteasomal protein catabolic process | GO:1901799 | 16 | 0.012 | |
| positive regulation of organelle organization | GO:0010638 | 65 | 0.012 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.012 | |
| regulation of molecular function | GO:0065009 | 217 | 0.012 | |
| positive regulation of protein modification process | GO:0031401 | 58 | 0.012 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.012 | |
| muscle structure development | GO:0061061 | 224 | 0.012 | |
| nucleus organization | GO:0006997 | 45 | 0.012 | Worm |
| regulation of protein catabolic process | GO:0042176 | 55 | 0.012 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.012 | |
| nuclear division | GO:0000280 | 332 | 0.012 | |
| organelle localization | GO:0051640 | 148 | 0.011 | |
| establishment of protein localization | GO:0045184 | 163 | 0.011 | |
| regulation of protein complex disassembly | GO:0043244 | 29 | 0.011 | |
| mitotic spindle elongation | GO:0000022 | 81 | 0.011 | |
| response to temperature stimulus | GO:0009266 | 106 | 0.011 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.011 | |
| positive regulation of cellular catabolic process | GO:0031331 | 95 | 0.011 | |
| response to organic substance | GO:0010033 | 284 | 0.011 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.011 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.011 | |
| anaphase promoting complex dependent proteasomal ubiquitin dependent protein catabolic process | GO:0031145 | 30 | 0.011 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.011 | |
| negative regulation of multicellular organismal process | GO:0051241 | 142 | 0.011 | |
| cellularization | GO:0007349 | 90 | 0.010 | |
| regulation of mitotic sister chromatid separation | GO:0010965 | 28 | 0.010 | |
| actin filament based process | GO:0030029 | 220 | 0.010 | |
| neurological system process | GO:0050877 | 358 | 0.010 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.010 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.010 | |
| spindle assembly | GO:0051225 | 80 | 0.010 | |
| regulation of cellular protein catabolic process | GO:1903362 | 44 | 0.010 | |
| telomere maintenance | GO:0000723 | 21 | 0.010 | |
