| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.204 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.173 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.134 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.122 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.112 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.109 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.108 | |
| rna processing | GO:0006396 | 147 | 0.105 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.105 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.103 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.100 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.084 | |
| rna splicing | GO:0008380 | 83 | 0.069 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.065 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.065 | |
| mrna metabolic process | GO:0016071 | 124 | 0.059 | |
| mrna processing | GO:0006397 | 104 | 0.056 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.054 | |
| response to oxidative stress | GO:0006979 | 86 | 0.047 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.039 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.034 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.033 | |
| organelle assembly | GO:0070925 | 198 | 0.033 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.033 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.033 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.032 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.032 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.031 | |
| dna metabolic process | GO:0006259 | 227 | 0.030 | |
| regulation of localization | GO:0032879 | 275 | 0.030 | |
| intracellular transport | GO:0046907 | 228 | 0.028 | |
| stem cell division | GO:0017145 | 69 | 0.027 | |
| programmed cell death | GO:0012501 | 257 | 0.027 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.027 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.026 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.025 | |
| nuclear transport | GO:0051169 | 72 | 0.025 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.024 | |
| regulation of cell death | GO:0010941 | 173 | 0.023 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.023 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.023 | |
| dna alkylation | GO:0006305 | 4 | 0.022 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.021 | |
| gene silencing by rna | GO:0031047 | 57 | 0.021 | |
| regulation of immune system process | GO:0002682 | 176 | 0.021 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.021 | |
| chromatin modification | GO:0016568 | 147 | 0.020 | |
| rna catabolic process | GO:0006401 | 37 | 0.018 | |
| positive regulation of apoptotic signaling pathway | GO:2001235 | 4 | 0.018 | |
| cell division | GO:0051301 | 248 | 0.018 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.018 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.018 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.017 | |
| cellular catabolic process | GO:0044248 | 372 | 0.017 | |
| histone modification | GO:0016570 | 106 | 0.016 | |
| phagocytosis | GO:0006909 | 215 | 0.016 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.015 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.015 | |
| centrosome cycle | GO:0007098 | 137 | 0.015 | |
| embryonic development via the syncytial blastoderm | GO:0001700 | 148 | 0.015 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.015 | |
| cell motility | GO:0048870 | 251 | 0.014 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.014 | |
| meiotic dna double strand break formation involved in reciprocal meiotic recombination | GO:0010780 | 1 | 0.014 | |
| oocyte differentiation | GO:0009994 | 145 | 0.014 | |
| cell cycle arrest | GO:0007050 | 4 | 0.014 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.013 | |
| terminal button organization | GO:0072553 | 19 | 0.013 | |
| snrna 3 end processing | GO:0034472 | 14 | 0.012 | |
| histone acetylation | GO:0016573 | 38 | 0.012 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.012 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.012 | |
| centrosome organization | GO:0051297 | 163 | 0.012 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.012 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.012 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.012 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 20 | 0.012 | |
| neural precursor cell proliferation | GO:0061351 | 75 | 0.012 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.011 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.011 | |
| chromatin remodeling | GO:0006338 | 72 | 0.011 | |
| spermatogenesis | GO:0007283 | 200 | 0.011 | |
| neurological system process | GO:0050877 | 358 | 0.011 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.011 | |
| localization of cell | GO:0051674 | 257 | 0.011 | |
| organelle fission | GO:0048285 | 340 | 0.011 | |
| endosomal transport | GO:0016197 | 44 | 0.011 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.011 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.011 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.011 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.010 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.010 | |
| regulation of response to stress | GO:0080134 | 200 | 0.010 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.010 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.010 | |
| rna interference | GO:0016246 | 27 | 0.010 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.010 | |
| dendrite development | GO:0016358 | 204 | 0.010 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.010 | |
