| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 1.000 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.961 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.958 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.944 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.917 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.911 | |
| eye morphogenesis | GO:0048592 | 260 | 0.824 | Zebrafish |
| negative regulation of developmental process | GO:0051093 | 201 | 0.796 | Mouse Worm |
| regulation of cell differentiation | GO:0045595 | 302 | 0.787 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.747 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.742 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.724 | |
| peripheral nervous system development | GO:0007422 | 52 | 0.722 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.657 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.654 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.627 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.614 | Zebrafish |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.606 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.606 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.554 | Mouse |
| sex differentiation | GO:0007548 | 81 | 0.527 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.486 | |
| chromosome organization | GO:0051276 | 360 | 0.468 | |
| larval development | GO:0002164 | 104 | 0.433 | Worm |
| multi organism reproductive behavior | GO:0044705 | 121 | 0.431 | Worm |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.413 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.396 | |
| eye development | GO:0001654 | 323 | 0.386 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.384 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.357 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.325 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.324 | |
| chemotaxis | GO:0006935 | 249 | 0.311 | Zebrafish |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.285 | |
| phagocytosis | GO:0006909 | 215 | 0.274 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.272 | |
| multicellular organismal reproductive behavior | GO:0033057 | 110 | 0.258 | Worm |
| synapse assembly | GO:0007416 | 143 | 0.255 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.240 | |
| chromatin organization | GO:0006325 | 207 | 0.238 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.234 | |
| segmentation | GO:0035282 | 207 | 0.223 | |
| growth | GO:0040007 | 359 | 0.204 | |
| single organism cellular localization | GO:1902580 | 180 | 0.203 | |
| lipid storage | GO:0019915 | 38 | 0.200 | Worm |
| developmental growth | GO:0048589 | 280 | 0.192 | |
| muscle structure development | GO:0061061 | 224 | 0.187 | |
| stem cell differentiation | GO:0048863 | 117 | 0.171 | Zebrafish |
| cellular macromolecule localization | GO:0070727 | 220 | 0.171 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.170 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.162 | |
| spermatogenesis | GO:0007283 | 200 | 0.159 | |
| male gamete generation | GO:0048232 | 201 | 0.154 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.151 | |
| neuron projection guidance | GO:0097485 | 241 | 0.151 | Zebrafish |
| multi multicellular organism process | GO:0044706 | 123 | 0.150 | Worm |
| positive regulation of growth | GO:0045927 | 75 | 0.150 | |
| eye antennal disc development | GO:0035214 | 60 | 0.145 | |
| cell proliferation | GO:0008283 | 299 | 0.142 | Mouse |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.137 | |
| stem cell maintenance | GO:0019827 | 67 | 0.136 | |
| compound eye development | GO:0048749 | 307 | 0.126 | |
| muscle organ development | GO:0007517 | 127 | 0.125 | Zebrafish |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.116 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.114 | Mouse |
| epithelial cell differentiation | GO:0030855 | 322 | 0.112 | |
| axon guidance | GO:0007411 | 233 | 0.112 | Zebrafish |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.110 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.109 | |
| endocytosis | GO:0006897 | 310 | 0.105 | Worm |
| cell cycle phase transition | GO:0044770 | 140 | 0.102 | Mouse |
| regulation of growth | GO:0040008 | 233 | 0.101 | |
| response to virus | GO:0009615 | 28 | 0.101 | |
| stem cell development | GO:0048864 | 79 | 0.101 | Zebrafish |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.098 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.097 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.096 | |
| gliogenesis | GO:0042063 | 80 | 0.096 | |
| notch signaling pathway | GO:0007219 | 120 | 0.096 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.094 | |
| multicellular organism growth | GO:0035264 | 46 | 0.094 | |
| regulation of multicellular organism growth | GO:0040014 | 40 | 0.093 | |
| nephron tubule morphogenesis | GO:0072078 | 3 | 0.093 | Mouse |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.092 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 89 | 0.087 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.085 | |
| localization of cell | GO:0051674 | 257 | 0.084 | Zebrafish Worm |
| hindbrain development | GO:0030902 | 2 | 0.083 | Zebrafish |
| dendrite development | GO:0016358 | 204 | 0.083 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.083 | |
| head development | GO:0060322 | 135 | 0.080 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.080 | Zebrafish Mouse Worm |
| regulation of imaginal disc growth | GO:0045570 | 26 | 0.079 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.076 | Worm |
| negative regulation of gtpase activity | GO:0034260 | 1 | 0.074 | |
| response to wounding | GO:0009611 | 94 | 0.073 | |
| peptidyl serine phosphorylation | GO:0018105 | 7 | 0.073 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.071 | |
| axon development | GO:0061564 | 297 | 0.069 | Zebrafish |
| synaptic growth at neuromuscular junction | GO:0051124 | 119 | 0.068 | |
| nephron epithelium development | GO:0072009 | 3 | 0.068 | Mouse |
| muscle tissue development | GO:0060537 | 30 | 0.067 | Zebrafish |
| positive regulation of histone h3 k4 methylation | GO:0051571 | 1 | 0.067 | |
| cell motility | GO:0048870 | 251 | 0.063 | Zebrafish Worm |
| reproductive system development | GO:0061458 | 74 | 0.063 | |
| oviposition | GO:0018991 | 19 | 0.061 | Worm |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.059 | |
| regulation of defense response | GO:0031347 | 102 | 0.059 | |
| hemocyte differentiation | GO:0042386 | 38 | 0.059 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.058 | |
| wound healing | GO:0042060 | 75 | 0.058 | |
| positive regulation of developmental growth | GO:0048639 | 62 | 0.057 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.056 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.053 | |
| cell fate specification | GO:0001708 | 71 | 0.052 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.050 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.049 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.049 | |
| positive regulation of viral process | GO:0048524 | 2 | 0.048 | |
| oocyte morphogenesis | GO:0048601 | 3 | 0.048 | |
| cell division | GO:0051301 | 248 | 0.047 | Worm |
| renal system development | GO:0072001 | 72 | 0.047 | Mouse |
| multi organism behavior | GO:0051705 | 175 | 0.045 | Worm |
| histone modification | GO:0016570 | 106 | 0.043 | |
| programmed cell death | GO:0012501 | 257 | 0.043 | |
| negative regulation of protein secretion | GO:0050709 | 2 | 0.043 | |
| cell death | GO:0008219 | 279 | 0.043 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.042 | |
| male sex differentiation | GO:0046661 | 25 | 0.040 | |
| negative regulation of cell cycle g1 s phase transition | GO:1902807 | 13 | 0.040 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.039 | Mouse |
| small molecule metabolic process | GO:0044281 | 305 | 0.039 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.038 | |
| cell adhesion | GO:0007155 | 136 | 0.037 | |
| maternal determination of dorsal ventral axis ovarian follicular epithelium soma encoded | GO:0008071 | 1 | 0.037 | |
| reproductive structure development | GO:0048608 | 74 | 0.037 | |
| anterior head segmentation | GO:0035288 | 3 | 0.037 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.037 | |
| body morphogenesis | GO:0010171 | 2 | 0.036 | Worm |
| negative regulation of cell death | GO:0060548 | 81 | 0.036 | |
| pigment metabolic process | GO:0042440 | 84 | 0.036 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.036 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.035 | |
| cell projection assembly | GO:0030031 | 94 | 0.035 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.035 | |
| spermatid differentiation | GO:0048515 | 114 | 0.035 | |
| dendrite regeneration | GO:0031104 | 2 | 0.034 | |
| appendage development | GO:0048736 | 401 | 0.034 | Mouse |
| epithelial cell fate determination open tracheal system | GO:0007425 | 2 | 0.034 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.033 | |
| negative regulation of gtp catabolic process | GO:0033125 | 1 | 0.032 | |
| telencephalon development | GO:0021537 | 2 | 0.031 | |
| response to red or far red light | GO:0009639 | 2 | 0.031 | |
| negative regulation of notch signaling pathway | GO:0045746 | 41 | 0.031 | |
| germ cell migration | GO:0008354 | 43 | 0.030 | |
| epithelial tube morphogenesis | GO:0060562 | 88 | 0.030 | Mouse |
| positive regulation of multicellular organism growth | GO:0040018 | 21 | 0.028 | |
| negative regulation of purine nucleotide catabolic process | GO:0033122 | 1 | 0.028 | |
| oocyte fate commitment | GO:0048600 | 2 | 0.027 | |
| cellular protein modification process | GO:0006464 | 438 | 0.027 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.026 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.026 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.026 | |
| developmental programmed cell death | GO:0010623 | 138 | 0.026 | |
| regulation of cell proliferation involved in compound eye morphogenesis | GO:2000495 | 2 | 0.026 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.025 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.025 | |
| reproductive behavior | GO:0019098 | 122 | 0.025 | Worm |
| chromatin modification | GO:0016568 | 147 | 0.024 | |
| meiotic spindle checkpoint | GO:0044779 | 1 | 0.024 | |
| detection of virus | GO:0009597 | 1 | 0.024 | |
| rna splicing | GO:0008380 | 83 | 0.024 | |
| positive regulation of synaptic transmission cholinergic | GO:0032224 | 2 | 0.024 | |
| camera type eye development | GO:0043010 | 4 | 0.023 | Zebrafish |
| regulation of epithelial cell proliferation | GO:0050678 | 4 | 0.023 | |
| negative regulation of terminal cell fate specification open tracheal system | GO:0035155 | 2 | 0.023 | |
| muscle cell fate commitment | GO:0042693 | 14 | 0.022 | |
| regulation of planar cell polarity pathway involved in axis elongation | GO:2000040 | 2 | 0.022 | |
| forebrain development | GO:0030900 | 2 | 0.022 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 38 | 0.022 | |
| specification of segmental identity antennal segment | GO:0007383 | 2 | 0.022 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.021 | Worm |
| peripheral nervous system neuron differentiation | GO:0048934 | 8 | 0.020 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.020 | Mouse |
| meiotic dna repair synthesis | GO:0000711 | 3 | 0.020 | |
| cellular catabolic process | GO:0044248 | 372 | 0.020 | |
| camera type eye morphogenesis | GO:0048593 | 2 | 0.020 | Zebrafish |
| skin development | GO:0043588 | 65 | 0.020 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.020 | |
| cellular amide metabolic process | GO:0043603 | 80 | 0.020 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.020 | Mouse |
| protein transport | GO:0015031 | 155 | 0.019 | |
| morphogenesis of a branching structure | GO:0001763 | 45 | 0.019 | Mouse |
| dna conformation change | GO:0071103 | 105 | 0.019 | |
| rna processing | GO:0006396 | 147 | 0.019 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.019 | |
| nitric oxide metabolic process | GO:0046209 | 1 | 0.019 | |
| maintenance of blood brain barrier | GO:0035633 | 1 | 0.019 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.019 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.018 | |
| meiotic nuclear envelope disassembly | GO:0051078 | 2 | 0.018 | |
| maintenance of neuroblast polarity | GO:0045201 | 3 | 0.018 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.018 | |
| response to ether | GO:0045472 | 1 | 0.018 | |
| protein modification process | GO:0036211 | 438 | 0.018 | |
| microtubule sliding | GO:0051012 | 3 | 0.018 | |
| regulation of centriole replication | GO:0046599 | 2 | 0.017 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.017 | |
| response to organic cyclic compound | GO:0014070 | 89 | 0.017 | |
| positive regulation of neuron projection regeneration | GO:0070572 | 3 | 0.017 | |
| protein localization to nuclear envelope | GO:0090435 | 2 | 0.017 | |
| positive regulation of cell migration | GO:0030335 | 2 | 0.017 | |
| regulation of response to stress | GO:0080134 | 200 | 0.017 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 31 | 0.017 | |
| mushroom body development | GO:0016319 | 70 | 0.017 | |
| organic substance transport | GO:0071702 | 257 | 0.016 | |
| phosphorylation | GO:0016310 | 294 | 0.016 | |
| establishment or maintenance of polarity of larval imaginal disc epithelium | GO:0016336 | 3 | 0.016 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.016 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.016 | |
| nephron epithelium morphogenesis | GO:0072088 | 3 | 0.016 | Mouse |
| regionalization | GO:0003002 | 416 | 0.015 | Mouse |
| ectodermal placode formation | GO:0060788 | 4 | 0.015 | |
| regulation of syncytial blastoderm mitotic cell cycle | GO:0007348 | 4 | 0.015 | |
| gene looping | GO:0090202 | 2 | 0.015 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.015 | |
| dna integration | GO:0015074 | 1 | 0.015 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.015 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.015 | |
| smoothened signaling pathway involved in ventral spinal cord patterning | GO:0021910 | 0 | 0.015 | |
| negative regulation of dna templated transcription initiation | GO:2000143 | 1 | 0.015 | |
| response to bacterium | GO:0009617 | 198 | 0.015 | |
| negative regulation of cell development | GO:0010721 | 62 | 0.015 | Mouse |
| blastoderm segmentation | GO:0007350 | 159 | 0.015 | |
| regulation of cell cycle g1 s phase transition | GO:1902806 | 23 | 0.015 | |
| asymmetric neuroblast division resulting in ganglion mother cell formation | GO:0055060 | 2 | 0.014 | |
| ganglion mother cell fate determination | GO:0007402 | 2 | 0.014 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.014 | Mouse |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.014 | |
| positive regulation of transcription involved in g2 m transition of mitotic cell cycle | GO:0090282 | 1 | 0.014 | |
| reactive oxygen species biosynthetic process | GO:1903409 | 0 | 0.014 | |
| eye antennal disc morphogenesis | GO:0007455 | 34 | 0.014 | |
| imaginal disc derived wing vein morphogenesis | GO:0008586 | 44 | 0.014 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.014 | |
| p granule organization | GO:0030719 | 4 | 0.014 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.014 | |
| trichome morphogenesis | GO:0010090 | 3 | 0.014 | |
| regulation of ran gtpase activity | GO:0032316 | 1 | 0.014 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.014 | |
| negative regulation of activin receptor signaling pathway | GO:0032926 | 1 | 0.013 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.013 | Zebrafish |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.013 | |
| positive regulation of store operated calcium channel activity | GO:1901341 | 1 | 0.013 | |
| response to uv b | GO:0010224 | 1 | 0.013 | |
| regulation of protein stability | GO:0031647 | 43 | 0.013 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.013 | |
| positive regulation of protein modification process | GO:0031401 | 58 | 0.013 | |
| anterior posterior axis specification follicular epithelium | GO:0030714 | 2 | 0.013 | |
| negative regulation of nucleotide metabolic process | GO:0045980 | 4 | 0.013 | |
| histone h3 k36 methylation | GO:0010452 | 1 | 0.013 | |
| death | GO:0016265 | 284 | 0.013 | |
| apoptotic process | GO:0006915 | 159 | 0.013 | |
| leg disc development | GO:0035218 | 92 | 0.013 | |
| trichome differentiation | GO:0010026 | 3 | 0.013 | |
| response to red light | GO:0010114 | 2 | 0.013 | |
| peptidyl serine modification | GO:0018209 | 7 | 0.013 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.013 | Zebrafish Mouse Worm |
| positive regulation of protein localization to nucleus | GO:1900182 | 21 | 0.013 | |
| cellular response to nutrient | GO:0031670 | 1 | 0.013 | |
| establishment of protein localization | GO:0045184 | 163 | 0.012 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.012 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.012 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.012 | |
| heart development | GO:0007507 | 82 | 0.012 | Zebrafish |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.012 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.012 | |
| positive regulation of posttranscriptional gene silencing | GO:0060148 | 5 | 0.012 | |
| intermediate filament cytoskeleton organization | GO:0045104 | 1 | 0.012 | |
| reactive nitrogen species metabolic process | GO:2001057 | 0 | 0.012 | |
| cell migration | GO:0016477 | 238 | 0.012 | Zebrafish Worm |
| dna templated transcriptional start site selection | GO:0001173 | 1 | 0.012 | |
| regulation of reactive oxygen species biosynthetic process | GO:1903426 | 0 | 0.011 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.011 | |
| gonad development | GO:0008406 | 50 | 0.011 | |
| developmental growth involved in morphogenesis | GO:0060560 | 65 | 0.011 | |
| response to organic substance | GO:0010033 | 284 | 0.011 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.011 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.011 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.011 | |
| lipid localization | GO:0010876 | 54 | 0.011 | Worm |
| negative regulation of cellular response to hypoxia | GO:1900038 | 1 | 0.011 | |
| regulation of striated muscle contraction | GO:0006942 | 2 | 0.011 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.011 | |
| oxidation reduction process | GO:0055114 | 123 | 0.010 | |
| negative regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0017055 | 1 | 0.010 | |
| synaptic vesicle budding from presynaptic membrane | GO:0016185 | 1 | 0.010 | |
| neuroblast proliferation | GO:0007405 | 74 | 0.010 | |
| regulation of chromosome condensation | GO:0060623 | 1 | 0.010 | |
| regulation of i kappab kinase nf kappab signaling | GO:0043122 | 2 | 0.010 | |
| regulation of preblastoderm mitotic cell cycle | GO:0007347 | 1 | 0.010 | |
| meiotic sister chromatid cohesion centromeric | GO:0051754 | 2 | 0.010 | |
| tube development | GO:0035295 | 244 | 0.010 | Mouse Worm |
