Homo sapiens

14 known processes

RLIM

ring finger protein, LIM domain interacting

(Aliases: FLJ42887,RNF12,DKFZp686N06224,FLJ25923,NY-REN-43,FLJ45986,MGC15161,FLJ41093)

RLIM biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
somatic stem cell maintenanceGO:003501940.902
protein modification by small protein conjugationGO:00324463420.678
Human Mouse
chromatin modificationGO:00165682980.629
protein polyubiquitinationGO:00002091100.480
Human
protein ubiquitinationGO:00165673140.364
Human Mouse
covalent chromatin modificationGO:00165692540.333
chromatin organizationGO:00063253510.308
multicellular organismal homeostasisGO:0048871670.226
protein k48 linked ubiquitinationGO:0070936380.211
negative regulation of erythrocyte differentiationGO:004564730.208
compound eye developmentGO:004874910.195
histone modificationGO:00165702510.177
vesicle mediated transportGO:00161923710.153
tissue homeostasisGO:0001894630.145
hair cycleGO:0042633280.142
modification dependent protein catabolic processGO:00199412090.141
Mouse
post embryonic developmentGO:000979120.130
proteolysis involved in cellular protein catabolic processGO:00516032440.129
Mouse
histone ubiquitinationGO:0016574310.127
regulation of cell differentiationGO:00455953930.126
protein oligomerizationGO:00512591730.123
cellular protein catabolic processGO:00442572610.121
Mouse
ubiquitin dependent protein catabolic processGO:00065112060.116
Mouse
proteasome mediated ubiquitin dependent protein catabolic processGO:00431611560.115
cerebellum developmentGO:002154920.114
anatomical structure homeostasisGO:00602491000.107
negative regulation of developmental processGO:00510932470.096
modification dependent macromolecule catabolic processGO:00436322120.085
Mouse
negative regulation of cell differentiationGO:00455961710.076
negative regulation of immune system processGO:00026831360.075
hindbrain developmentGO:003090230.073
anterior posterior axis specificationGO:000994820.072
hemoglobin biosynthetic processGO:004254130.071
cell morphogenesisGO:00009022960.071
protein autoubiquitinationGO:0051865370.070
protein monoubiquitinationGO:0006513390.069
histone monoubiquitinationGO:0010390200.066
protein maturationGO:00516042330.065
protein k11 linked ubiquitinationGO:0070979240.065
phototransductionGO:000760230.063
cellular macromolecule catabolic processGO:00442653800.063
Mouse
regulation of response to external stimulusGO:00321012220.062
negative regulation of homeostatic processGO:0032845590.058
tube developmentGO:00352951250.058
proteasomal protein catabolic processGO:00104981760.058
protein processingGO:00164852260.058
epidermis developmentGO:0008544590.054
endocytosisGO:00068971590.051
cellular macromolecular complex assemblyGO:00346223240.051
cell developmentGO:00484683280.051
metencephalon developmentGO:002203720.051
hemopoiesisGO:00300971800.050
regulation of homeostatic processGO:00328441210.049
cellular component morphogenesisGO:00329893140.049
regulation of cell cycleGO:00517263930.049
regulation of cellular component biogenesisGO:00440872810.048
multicellular organismal agingGO:001025930.048
wnt signaling pathwayGO:00160551560.048
cell projection organizationGO:00300302520.047
protein catabolic processGO:00301633250.047
Mouse
female gamete generationGO:000729220.046
neurological system processGO:00508771630.046
nervous system developmentGO:00073992930.046
canonical wnt signaling pathwayGO:00600701160.046
chemotaxisGO:00069351570.045
negative regulation of catabolic processGO:00098951040.045
oogenesisGO:004847720.044
regulation of proteolysisGO:00301622930.044
stem cell differentiationGO:0048863930.044
system processGO:00030083490.044
regulation of protein maturationGO:19033171500.042
negative regulation of protein metabolic processGO:00512483910.041
cellular amino acid metabolic processGO:00065201160.040
negative regulation of cellular catabolic processGO:0031330830.040
regulation of hemoglobin biosynthetic processGO:004698410.040
peptidyl lysine modificationGO:00182051440.040
negative regulation of proteolysisGO:00458611320.039
rna processingGO:00063962550.039
phototransduction visible lightGO:000760320.039
protein homooligomerizationGO:00512601000.038
amine metabolic processGO:0009308440.038
determination of adult lifespanGO:000834020.037
rhodopsin mediated signaling pathwayGO:001605610.037
negative regulation of protein maturationGO:19033181420.037
negative regulation of cellular protein metabolic processGO:00322693530.036
segmentationGO:003528240.036
skin developmentGO:0043588760.036
mrna metabolic processGO:00160711750.036
cell part morphogenesisGO:00329901370.035
protein k63 linked ubiquitinationGO:0070534310.035
internal protein amino acid acetylationGO:00064751010.035
regulation of protein processingGO:00706131500.035
regulation of rhodopsin mediated signaling pathwayGO:002240010.035
histone h3 acetylationGO:0043966450.035
response to external biotic stimulusGO:00432072610.034
neuron differentiationGO:00301821380.033
regulation of protein complex assemblyGO:00432541470.033
negative regulation of organelle organizationGO:00106391260.033
negative regulation of phosphate metabolic processGO:00459362670.033
hematopoietic or lymphoid organ developmentGO:00485341860.031
taxisGO:00423301570.031
response to oxygen containing compoundGO:19017003690.031
histone acetylationGO:0016573930.031
isg15 protein conjugationGO:003202050.031
immune system developmentGO:00025201950.031
epithelial structure maintenanceGO:001066990.031
regulation of proteasomal protein catabolic processGO:0061136870.031
negative regulation of protein processingGO:00109551420.030
organelle assemblyGO:00709251760.030
regulation of protein catabolic processGO:00421761550.030
response to biotic stimulusGO:00096072760.029
protein acylationGO:00435431380.029
positive regulation of programmed cell deathGO:00430682490.029
regulation of cellular amine metabolic processGO:0033238110.029
negative regulation of catalytic activityGO:00430863350.029
intracellular steroid hormone receptor signaling pathwayGO:0030518610.029
Human
molting cycle processGO:0022404120.029
sensory organ developmentGO:0007423520.029
cell morphogenesis involved in differentiationGO:00009041440.029
protein ubiquitination involved in ubiquitin dependent protein catabolic processGO:0042787370.029
response to radiationGO:00093141510.028
detection of stimulusGO:0051606850.028
negative regulation of programmed cell deathGO:00430693210.028
stem cell developmentGO:0048864690.027
negative regulation of multicellular organismal processGO:00512413170.027
positive regulation of cellular amino acid metabolic processGO:004576430.027
regulation of locomotionGO:00400123290.027
negative regulation of cellular component organizationGO:00511292350.027
cellular response to dna damage stimulusGO:00069743790.027
apoptotic signaling pathwayGO:00971902680.027
cell projection morphogenesisGO:00488581290.026
interspecies interaction between organismsGO:00444191560.026
biological adhesionGO:00226103310.026
positive regulation of cell deathGO:00109422630.026
sensory perception of light stimulusGO:0050953350.026
protein acetylationGO:00064731160.026
neurogenesisGO:00220081690.026
negative regulation of protein modification processGO:00314002000.025
generation of neuronsGO:00486991520.025
neuron developmentGO:00486661130.025
posttranscriptional regulation of gene expressionGO:00106082130.025
actin filament based processGO:00300292240.025
regulation of cellular response to stressGO:00801352440.024
immune responseGO:00069553070.024
positive regulation of organelle organizationGO:00106381950.024
mitotic cell cycleGO:00002783260.024
hemoglobin metabolic processGO:002002730.024
innate immune responseGO:00450871780.024
stem cell maintenanceGO:0019827190.024
regulation of canonical wnt signaling pathwayGO:0060828880.023
cellular ketone metabolic processGO:0042180800.023
cellular response to abiotic stimulusGO:00712141170.023
cellular response to endogenous stimulusGO:00714953360.023
regulation of proteasomal ubiquitin dependent protein catabolic processGO:0032434710.023
cellular protein complex assemblyGO:00436231880.023
anatomical structure formation involved in morphogenesisGO:00486462840.023
regulation of protein ubiquitinationGO:0031396950.023
regulation of kinase activityGO:00435493140.022
negative regulation of phosphorylationGO:00423261740.022
regulation of proteolysis involved in cellular protein catabolic processGO:1903050910.022
negative regulation of hydrolase activityGO:00513461820.022
regulation of protein modification by small protein conjugation or removalGO:19033201070.022
regulation of mitotic cell cycleGO:00073461890.022
regulation of cellular protein catabolic processGO:1903362960.022
myeloid cell differentiationGO:00300991170.022
positive regulation of hemoglobin biosynthetic processGO:004698510.022
positive regulation of cellular component biogenesisGO:00440891580.021
regulation of protein transportGO:00512232130.021
internal peptidyl lysine acetylationGO:0018393970.021
positive regulation of apoptotic processGO:00430652460.021
maintenance of locationGO:00512351120.021
mitotic cell cycle processGO:19030472860.020
embryonic epithelial tube formationGO:000183840.020
positive regulation of protein ubiquitinationGO:0031398530.020
regulation of cell cycle processGO:00105642660.020
mrna processingGO:00063971330.020
memoryGO:000761330.020
cell cycle phase transitionGO:00447701730.020
metal ion transportGO:00300012720.020
regulation of cellular ketone metabolic processGO:0010565500.019
positive regulation of cell adhesionGO:0045785840.019
regulation of mitotic cell cycle phase transitionGO:19019901180.019
epithelium developmentGO:00604292270.019
negative regulation of transcription from rna polymerase ii promoterGO:00001222810.019
Mouse
spinal cord developmentGO:002151040.019
neural tube formationGO:000184130.019
blastoderm segmentationGO:000735020.018
response to virusGO:00096151260.018
negative regulation of apoptotic processGO:00430663160.018
head developmentGO:00603221080.018
sensory perceptionGO:00076001030.018
positive regulation of immune system processGO:00026842830.018
chromosome segregationGO:00070591140.018
immune effector processGO:00022521590.018
molting cycleGO:0042303280.018
neuron projection developmentGO:00311751060.018
cell differentiation in hindbrainGO:002153310.018
hair follicle developmentGO:0001942110.018
central nervous system developmentGO:00074171230.018
locomotory behaviorGO:000762610.018
regulation of erythrocyte differentiationGO:0045646170.017
regulation of anatomical structure morphogenesisGO:00226032860.017
eye developmentGO:0001654420.017
myeloid cell homeostasisGO:0002262340.017
mapk cascadeGO:00001652880.017
regulation of cytoskeleton organizationGO:00514931770.017
negative regulation of cell proliferationGO:00082852280.017
symbiosis encompassing mutualism through parasitismGO:00444031560.017
negative regulation of cell cycleGO:00457861930.017
response to other organismGO:00517072610.017
regulation of sequence specific dna binding transcription factor activityGO:00510902110.017
Mouse
positive regulation of cellular catabolic processGO:00313312840.017
positive regulation of viral entry into host cellGO:004659830.017
peptidyl lysine acetylationGO:00183941010.017
response to abiotic stimulusGO:00096283360.017
positive regulation of cellular component organizationGO:00511303760.017
positive regulation of cell proliferationGO:00082843010.017
spermatid differentiationGO:004851540.016
sensory perception of soundGO:0007605370.016
negative regulation of cell deathGO:00605483450.016
mitotic cell cycle phase transitionGO:00447721620.016
cellular amine metabolic processGO:0044106410.016
nerve developmentGO:002167540.016
regulation of peptidase activityGO:00525471800.016
regulation of cell developmentGO:00602841610.016
rna catabolic processGO:0006401710.016
positive regulation of wnt signaling pathwayGO:0030177540.016
negative regulation of protein catabolic processGO:0042177590.016
transmembrane transportGO:00550853990.016
actin cytoskeleton organizationGO:00300362070.016
purine ribonucleoside triphosphate catabolic processGO:00092073910.016
glycoprotein metabolic processGO:00091001100.016
regulation of microtubule cytoskeleton organizationGO:0070507610.016
regulation of g protein coupled receptor protein signaling pathwayGO:0008277350.016
neuron projection morphogenesisGO:0048812500.015
regulation of cellular amino acid metabolic processGO:000652160.015
regulation of mapk cascadeGO:00434082620.015
detection of stimulus involved in sensory perceptionGO:0050906430.015
embryo developmentGO:00097901230.015
growthGO:00400072020.015
ras protein signal transductionGO:0007265730.015
purine nucleoside catabolic processGO:00061523980.015
sensory perception of mechanical stimulusGO:0050954370.015
purine ribonucleoside triphosphate metabolic processGO:00092054110.015
negative regulation of cellular amine metabolic processGO:003323930.015
positive regulation of protein modification by small protein conjugation or removalGO:1903322610.015
regulation of wnt signaling pathwayGO:00301111230.015
negative regulation of myeloid cell differentiationGO:0045638420.015
lipid localizationGO:00108761060.015
regulation of cytokine productionGO:00018172320.015
negative regulation of apoptotic signaling pathwayGO:2001234970.015
meiosis iGO:000712740.015
positive regulation of immune responseGO:00507781590.014
regulation of cell adhesionGO:00301551660.014
regulation of protein stabilityGO:0031647870.014
positive regulation of cell differentiationGO:00455972110.014
regulation of myeloid cell differentiationGO:0045637810.014
carbohydrate derivative biosynthetic processGO:19011372070.014
neuromuscular junction developmentGO:000752830.014
digestive tract developmentGO:0048565750.014
phagocytosisGO:0006909420.014
digestive system developmentGO:0055123750.014
viral release from host cellGO:0019076210.014
peripheral nervous system developmentGO:000742220.014
brain developmentGO:0007420970.014
regulation of cell cycle phase transitionGO:19019871260.014
glycoprotein biosynthetic processGO:0009101910.014
response to extracellular stimulusGO:0009991850.014
response to lipidGO:00339932060.014
cellular response to radiationGO:0071478650.014
cerebellar cortex developmentGO:002169510.014
response to hormoneGO:00097251750.014
negative regulation of intracellular signal transductionGO:19025321830.014
macromolecule glycosylationGO:0043413630.014
g protein coupled receptor signaling pathwayGO:00071862070.014
meiotic chromosome segregationGO:004513240.014
cell adhesionGO:00071553250.014
cell morphogenesis involved in neuron differentiationGO:0048667440.014
defense responseGO:00069523150.014
regulation of apoptotic signaling pathwayGO:20012331750.014
response to fungusGO:000962040.014
regulation of endopeptidase activityGO:00525481700.014
negative regulation of cellular protein catabolic processGO:1903363380.013
negative regulation of calcium ion importGO:009028110.013
positive regulation of cytokine productionGO:00018191670.013
regenerationGO:003109940.013
positive regulation of catabolic processGO:00098963100.013
purine containing compound catabolic processGO:00725234110.013
protein localization to organelleGO:00333652800.013
cation transportGO:00068123310.013
microtubule based processGO:00070172100.013
ribonucleoside triphosphate catabolic processGO:00092033910.013
positive regulation of developmental processGO:00510943140.013
positive regulation of phosphorylationGO:00423273940.013
somitogenesisGO:000175620.013
i kappab kinase nf kappab signalingGO:00072491660.013
digestive tract morphogenesisGO:0048546560.013
mrna catabolic processGO:0006402560.013
pattern specification processGO:0007389430.013
erythrocyte differentiationGO:0030218280.013
cellular response to oxygen containing compoundGO:19017012760.013
cytokine productionGO:00018162470.013
regulation of cellular component movementGO:00512703340.013
glycosyl compound catabolic processGO:19016584130.013
oocyte developmentGO:004859910.013
negative regulation of kinase activityGO:00336731060.013
regulation of gene expression epigeneticGO:0040029730.013
negative regulation of cell cycle phase transitionGO:1901988890.012
negative regulation of cellular amino acid metabolic processGO:004576320.012
organelle fissionGO:00482851490.012
associative learningGO:000830610.012
regulation of cysteine type endopeptidase activityGO:20001161270.012
ion transmembrane transportGO:00342203380.012
purine nucleoside triphosphate catabolic processGO:00091463920.012
small gtpase mediated signal transductionGO:0007264780.012
translationGO:00064121320.012
regulation of immune effector processGO:0002697910.012
carbohydrate metabolic processGO:00059752070.012
gastrulationGO:0007369510.012
intrinsic apoptotic signaling pathwayGO:00971931270.012
positive regulation of sequence specific dna binding transcription factor activityGO:00510911310.012
positive regulation of transportGO:00510503360.012
positive regulation of defense responseGO:0031349870.012
regulation of transferase activityGO:00513383550.012
positive regulation of proteolysisGO:00458621420.012
interleukin 2 secretionGO:007097030.012
cellular response to external stimulusGO:00714961110.011
purine ribonucleoside metabolic processGO:00461284370.011
regulation of dna templated transcription elongationGO:0032784230.011
secretion by cellGO:00329402260.011
primary neural tube formationGO:001402030.011
embryonic morphogenesisGO:0048598850.011
positive regulation of cell cycleGO:00457871400.011
defense response to virusGO:0051607710.011
negative regulation of mitotic cell cycleGO:00459301020.011
organophosphate catabolic processGO:00464344300.011
cellular response to lipidGO:00713961270.011
reactive oxygen species biosynthetic processGO:190340940.011
tube morphogenesisGO:0035239950.011
cell cycle checkpointGO:00000751170.011
oocyte differentiationGO:000999420.011
regulation of protein localizationGO:00328802960.011
mitotic sister chromatid segregationGO:0000070530.011
regulation of dna metabolic processGO:00510521530.011
homeostasis of number of cellsGO:0048872400.011
positive regulation of locomotionGO:00400171860.011
dna repairGO:00062811980.011
regulation of immune responseGO:00507762010.011
regulation of actin filament based processGO:00329701410.011
neural tube closureGO:000184330.011
organophosphate biosynthetic processGO:00904071630.011
cell divisionGO:00513011680.011
regulation of intrinsic apoptotic signaling pathwayGO:2001242720.011
negative regulation of transferase activityGO:00513481240.011
regulation of secretionGO:00510461940.011
ribonucleotide catabolic processGO:00092614050.011
nuclear divisionGO:00002801280.010
dna templated transcription elongationGO:0006354250.010
macroautophagyGO:0016236390.010
regulation of viral release from host cellGO:1902186200.010
regulation of protein secretionGO:0050708860.010
rna interferenceGO:001624640.010
regulation of organelle assemblyGO:1902115400.010
negative regulation of endopeptidase activityGO:0010951840.010
negative regulation of protein phosphorylationGO:00019331400.010
response to organic cyclic compoundGO:00140702040.010
regulation of cysteine type endopeptidase activity involved in apoptotic processGO:00432811160.010
mitochondrion organizationGO:00070051560.010
regulation of reactive oxygen species biosynthetic processGO:190342630.010
protein localization to membraneGO:00726571600.010
response to light stimulusGO:0009416870.010
reactive oxygen species metabolic processGO:0072593750.010
ribonucleoside catabolic processGO:00424544060.010
ventral spinal cord developmentGO:002151710.010
atp metabolic processGO:00460341760.010
response to axon injuryGO:004867810.010
regulation of reactive oxygen species metabolic processGO:2000377410.010

RLIM disease predictions

DiseaseDO term IDSizeProbabilityFunc Analog Org
nervous system diseaseDOID:8634310.020
sensory system diseaseDOID:00501552030.020
retinal diseaseDOID:56791180.017
eye diseaseDOID:56141490.017
retinal degenerationDOID:8466890.017
eye and adnexa diseaseDOID:14921500.017
cancerDOID:1621670.014
Human
disease of cellular proliferationDOID:145661740.014
Human
organ system cancerDOID:00506861640.014
Human
central nervous system diseaseDOID:3311860.013
musculoskeletal system diseaseDOID:172230.013
disease of metabolismDOID:00146672950.010
inherited metabolic disorderDOID:6552420.010