| amino acid activation | GO:0043038 | 12 | 1.000 | Mouse Rat |
| trna aminoacylation for protein translation | GO:0006418 | 8 | 1.000 | Mouse Rat |
| trna aminoacylation | GO:0043039 | 12 | 0.982 | Mouse Rat |
| cellular amino acid metabolic process | GO:0006520 | 116 | 0.897 | Mouse Rat |
| alpha amino acid metabolic process | GO:1901605 | 72 | 0.831 | |
| cellular amino acid biosynthetic process | GO:0008652 | 30 | 0.768 | |
| ncrna metabolic process | GO:0034660 | 108 | 0.736 | Mouse Rat |
| serine family amino acid metabolic process | GO:0009069 | 12 | 0.691 | |
| one carbon metabolic process | GO:0006730 | 1 | 0.593 | |
| carboxylic acid biosynthetic process | GO:0046394 | 97 | 0.574 | |
| small molecule biosynthetic process | GO:0044283 | 157 | 0.410 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 200 | 0.388 | |
| translation | GO:0006412 | 132 | 0.369 | Mouse Rat |
| post embryonic development | GO:0009791 | 2 | 0.366 | Worm |
| l serine metabolic process | GO:0006563 | 5 | 0.332 | |
| cellular amino acid catabolic process | GO:0009063 | 31 | 0.326 | |
| proline transport | GO:0015824 | 4 | 0.310 | |
| dicarboxylic acid metabolic process | GO:0043648 | 29 | 0.283 | |
| aspartate family amino acid catabolic process | GO:0009068 | 5 | 0.281 | |
| glutamine family amino acid metabolic process | GO:0009064 | 17 | 0.281 | |
| mitochondrial rna metabolic process | GO:0000959 | 15 | 0.266 | |
| organic acid biosynthetic process | GO:0016053 | 97 | 0.246 | |
| coenzyme metabolic process | GO:0006732 | 65 | 0.243 | |
| angiogenesis | GO:0001525 | 147 | 0.219 | |
| modified amino acid transport | GO:0072337 | 11 | 0.209 | |
| cation transmembrane transport | GO:0098655 | 238 | 0.205 | |
| chloride transmembrane transport | GO:1902476 | 38 | 0.168 | |
| patterning of blood vessels | GO:0001569 | 2 | 0.155 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.151 | |
| glycine metabolic process | GO:0006544 | 4 | 0.143 | |
| regulation of mitotic cell cycle | GO:0007346 | 189 | 0.139 | |
| alanine transport | GO:0032328 | 3 | 0.131 | |
| oogenesis | GO:0048477 | 2 | 0.120 | Worm |
| nucleoside phosphate biosynthetic process | GO:1901293 | 109 | 0.117 | |
| dicarboxylic acid catabolic process | GO:0043649 | 9 | 0.108 | |
| alpha amino acid catabolic process | GO:1901606 | 26 | 0.108 | |
| oxaloacetate metabolic process | GO:0006107 | 1 | 0.105 | |
| trna metabolic process | GO:0006399 | 35 | 0.102 | Mouse Rat |
| water soluble vitamin metabolic process | GO:0006767 | 6 | 0.100 | |
| embryo development | GO:0009790 | 123 | 0.096 | Worm |
| mitotic cell cycle | GO:0000278 | 326 | 0.095 | |
| aspartate family amino acid biosynthetic process | GO:0009067 | 6 | 0.091 | |
| single organism carbohydrate metabolic process | GO:0044723 | 193 | 0.090 | |
| response to radiation | GO:0009314 | 151 | 0.090 | |
| organic anion transport | GO:0015711 | 103 | 0.090 | |
| response to cytokine | GO:0034097 | 232 | 0.085 | |
| response to abiotic stimulus | GO:0009628 | 336 | 0.083 | |
| dicarboxylic acid biosynthetic process | GO:0043650 | 4 | 0.080 | |
| cellular response to cytokine stimulus | GO:0071345 | 181 | 0.077 | |
| cellular response to endogenous stimulus | GO:0071495 | 336 | 0.075 | |
| purine nucleobase biosynthetic process | GO:0009113 | 3 | 0.074 | |
| female gamete generation | GO:0007292 | 2 | 0.074 | Worm |
| cellular protein complex assembly | GO:0043623 | 188 | 0.072 | |
| response to mechanical stimulus | GO:0009612 | 51 | 0.071 | |
| negative regulation of apoptotic process | GO:0043066 | 316 | 0.068 | Mouse |
| segmentation | GO:0035282 | 4 | 0.065 | |
| positive regulation of cell cycle | GO:0045787 | 140 | 0.064 | |
| carbohydrate biosynthetic process | GO:0016051 | 42 | 0.062 | |
| serine family amino acid catabolic process | GO:0009071 | 5 | 0.062 | |
| response to amino acid | GO:0043200 | 14 | 0.059 | Mouse |
| dna templated transcription termination | GO:0006353 | 3 | 0.058 | |
| amide biosynthetic process | GO:0043604 | 15 | 0.058 | |
| chemical homeostasis | GO:0048878 | 306 | 0.057 | |
| response to insulin | GO:0032868 | 45 | 0.056 | |
| cell projection organization | GO:0030030 | 252 | 0.052 | |
| response to peptide | GO:1901652 | 65 | 0.052 | |
| maintenance of location | GO:0051235 | 112 | 0.052 | |
| nucleobase biosynthetic process | GO:0046112 | 4 | 0.052 | |
| response to oxygen containing compound | GO:1901700 | 369 | 0.049 | Mouse |
| sulfur amino acid transport | GO:0000101 | 2 | 0.048 | |
| positive regulation of mitotic cell cycle | GO:0045931 | 60 | 0.047 | |
| response to hypoxia | GO:0001666 | 96 | 0.045 | |
| cellular response to hormone stimulus | GO:0032870 | 125 | 0.045 | |
| nucleotide biosynthetic process | GO:0009165 | 109 | 0.044 | |
| purine containing compound biosynthetic process | GO:0072522 | 88 | 0.044 | |
| organophosphate biosynthetic process | GO:0090407 | 163 | 0.044 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 244 | 0.043 | |
| regulation of cell cycle | GO:0051726 | 393 | 0.042 | |
| oocyte development | GO:0048599 | 1 | 0.041 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.041 | |
| response to hormone | GO:0009725 | 175 | 0.040 | |
| oocyte differentiation | GO:0009994 | 2 | 0.040 | |
| response to nitrogen compound | GO:1901698 | 184 | 0.040 | Mouse |
| monocarboxylic acid metabolic process | GO:0032787 | 185 | 0.039 | |
| blastoderm segmentation | GO:0007350 | 2 | 0.039 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 286 | 0.039 | |
| positive regulation of organelle organization | GO:0010638 | 195 | 0.039 | |
| neurogenesis | GO:0022008 | 169 | 0.037 | |
| cation transport | GO:0006812 | 331 | 0.036 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 186 | 0.036 | |
| blood vessel development | GO:0001568 | 172 | 0.035 | |
| cellular response to external stimulus | GO:0071496 | 111 | 0.035 | |
| negative regulation of programmed cell death | GO:0043069 | 321 | 0.034 | Mouse |
| multicellular organismal aging | GO:0010259 | 3 | 0.034 | |
| response to peptide hormone | GO:0043434 | 61 | 0.033 | |
| inorganic ion transmembrane transport | GO:0098660 | 231 | 0.033 | |
| vasculature development | GO:0001944 | 181 | 0.032 | |
| anterior posterior axis specification | GO:0009948 | 2 | 0.031 | |
| system process | GO:0003008 | 349 | 0.030 | Mouse |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.030 | |
| amino acid transmembrane transport | GO:0003333 | 20 | 0.030 | |
| response to decreased oxygen levels | GO:0036293 | 96 | 0.030 | |
| l alanine transport | GO:0015808 | 3 | 0.029 | |
| cellular protein catabolic process | GO:0044257 | 261 | 0.029 | |
| mitochondrion organization | GO:0007005 | 156 | 0.029 | |
| positive regulation of hydrolase activity | GO:0051345 | 331 | 0.029 | |
| nucleobase metabolic process | GO:0009112 | 8 | 0.029 | |
| cellular amine metabolic process | GO:0044106 | 41 | 0.028 | |
| response to endoplasmic reticulum stress | GO:0034976 | 49 | 0.028 | Mouse |
| organic hydroxy compound metabolic process | GO:1901615 | 147 | 0.027 | |
| transmembrane transport | GO:0055085 | 399 | 0.027 | |
| negative regulation of cell proliferation | GO:0008285 | 228 | 0.026 | |
| tripartite regional subdivision | GO:0007351 | 2 | 0.026 | |
| glycerol metabolic process | GO:0006071 | 4 | 0.026 | |
| aspartate metabolic process | GO:0006531 | 4 | 0.026 | |
| anterior posterior axis specification embryo | GO:0008595 | 2 | 0.025 | |
| negative regulation of cell death | GO:0060548 | 345 | 0.025 | Mouse |
| proteasomal protein catabolic process | GO:0010498 | 176 | 0.024 | |
| amine metabolic process | GO:0009308 | 44 | 0.024 | |
| alpha amino acid biosynthetic process | GO:1901607 | 23 | 0.023 | |
| neurological system process | GO:0050877 | 163 | 0.023 | Mouse |
| glutamate metabolic process | GO:0006536 | 10 | 0.023 | |
| regulation of cellular amine metabolic process | GO:0033238 | 11 | 0.023 | |
| reproduction | GO:0000003 | 63 | 0.022 | Worm |
| negative regulation of phosphate metabolic process | GO:0045936 | 267 | 0.022 | |
| carbohydrate metabolic process | GO:0005975 | 207 | 0.022 | |
| positive regulation of cellular catabolic process | GO:0031331 | 284 | 0.022 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 411 | 0.022 | |
| negative regulation of catalytic activity | GO:0043086 | 335 | 0.022 | |
| regulation of proteolysis | GO:0030162 | 293 | 0.021 | |
| cellular macromolecule catabolic process | GO:0044265 | 380 | 0.021 | |
| purine nucleobase metabolic process | GO:0006144 | 5 | 0.021 | |
| hemopoiesis | GO:0030097 | 180 | 0.021 | |
| chloride transport | GO:0006821 | 41 | 0.021 | |
| modification dependent protein catabolic process | GO:0019941 | 209 | 0.021 | |
| blood vessel morphogenesis | GO:0048514 | 162 | 0.021 | |
| regulation of syncytium formation by plasma membrane fusion | GO:0060142 | 2 | 0.021 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 34 | 0.021 | Worm |
| carbohydrate derivative biosynthetic process | GO:1901137 | 207 | 0.020 | |
| cellular response to starvation | GO:0009267 | 58 | 0.020 | |
| vitamin metabolic process | GO:0006766 | 26 | 0.020 | |
| intracellular mrna localization | GO:0008298 | 1 | 0.020 | |
| endocytosis | GO:0006897 | 159 | 0.020 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 6 | 0.020 | |
| response to organic cyclic compound | GO:0014070 | 204 | 0.020 | |
| organic acid catabolic process | GO:0016054 | 71 | 0.020 | |
| osteoblast differentiation | GO:0001649 | 92 | 0.020 | |
| metal ion transport | GO:0030001 | 272 | 0.020 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 284 | 0.020 | |
| cellular response to extracellular stimulus | GO:0031668 | 72 | 0.020 | |
| tube morphogenesis | GO:0035239 | 95 | 0.020 | |
| small molecule catabolic process | GO:0044282 | 92 | 0.019 | |
| pigment biosynthetic process | GO:0046148 | 10 | 0.019 | |
| ion homeostasis | GO:0050801 | 230 | 0.019 | |
| pattern specification process | GO:0007389 | 43 | 0.019 | |
| response to starvation | GO:0042594 | 59 | 0.018 | |
| protein modification by small protein conjugation | GO:0032446 | 342 | 0.018 | |
| sulfur compound metabolic process | GO:0006790 | 101 | 0.018 | |
| response to lipid | GO:0033993 | 206 | 0.018 | |
| cell development | GO:0048468 | 328 | 0.018 | Worm |
| protein folding | GO:0006457 | 38 | 0.018 | Mouse |
| myeloid cell differentiation | GO:0030099 | 117 | 0.018 | |
| protein catabolic process | GO:0030163 | 325 | 0.018 | |
| single organism cellular localization | GO:1902580 | 332 | 0.018 | |
| branching morphogenesis of an epithelial tube | GO:0048754 | 19 | 0.018 | |
| circulatory system development | GO:0072359 | 262 | 0.017 | |
| immune response | GO:0006955 | 307 | 0.017 | |
| nervous system development | GO:0007399 | 293 | 0.017 | Mouse |
| establishment or maintenance of microtubule cytoskeleton polarity | GO:0030951 | 2 | 0.017 | |
| protein ubiquitination | GO:0016567 | 314 | 0.017 | |
| protein polymerization | GO:0051258 | 71 | 0.017 | |
| regulation of protein polymerization | GO:0032271 | 63 | 0.017 | |
| rhythmic behavior | GO:0007622 | 2 | 0.017 | |
| cell cycle phase transition | GO:0044770 | 173 | 0.017 | |
| mitotic cell cycle process | GO:1903047 | 286 | 0.016 | |
| regulation of protein complex assembly | GO:0043254 | 147 | 0.016 | |
| regulation of response to external stimulus | GO:0032101 | 222 | 0.016 | |
| gamma aminobutyric acid metabolic process | GO:0009448 | 1 | 0.016 | |
| cellular amide metabolic process | GO:0043603 | 69 | 0.016 | |
| cellular response to oxygen containing compound | GO:1901701 | 276 | 0.016 | |
| negative regulation of hydrolase activity | GO:0051346 | 182 | 0.016 | |
| d aspartate transport | GO:0070777 | 3 | 0.016 | |
| lung cell differentiation | GO:0060479 | 1 | 0.016 | |
| tube development | GO:0035295 | 125 | 0.016 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 116 | 0.016 | |
| positive regulation of cellular component organization | GO:0051130 | 376 | 0.016 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 281 | 0.016 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 392 | 0.015 | |
| peptidyl tyrosine modification | GO:0018212 | 170 | 0.015 | |
| microtubule polymerization | GO:0046785 | 18 | 0.015 | |
| tor signaling | GO:0031929 | 39 | 0.015 | |
| protein tetramerization | GO:0051262 | 47 | 0.015 | |
| small gtpase mediated signal transduction | GO:0007264 | 78 | 0.015 | |
| carboxylic acid catabolic process | GO:0046395 | 71 | 0.015 | |
| innate immune response | GO:0045087 | 178 | 0.014 | |
| immune system development | GO:0002520 | 195 | 0.014 | |
| positive regulation of catabolic process | GO:0009896 | 310 | 0.014 | |
| response to organonitrogen compound | GO:0010243 | 156 | 0.014 | Mouse |
| regulation of purine nucleotide catabolic process | GO:0033121 | 205 | 0.014 | |
| regulation of dna metabolic process | GO:0051052 | 153 | 0.014 | |
| actin mediated cell contraction | GO:0070252 | 12 | 0.014 | |
| regulation of endopeptidase activity | GO:0052548 | 170 | 0.014 | |
| memory | GO:0007613 | 3 | 0.014 | |
| cell morphogenesis | GO:0000902 | 296 | 0.014 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 50 | 0.014 | |
| response to oxygen levels | GO:0070482 | 100 | 0.014 | |
| regulation of transferase activity | GO:0051338 | 355 | 0.014 | |
| positive regulation of protein catabolic process | GO:0045732 | 75 | 0.014 | |
| protein refolding | GO:0042026 | 14 | 0.014 | |
| ion transmembrane transport | GO:0034220 | 338 | 0.014 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 412 | 0.014 | |
| mitotic cell cycle phase transition | GO:0044772 | 162 | 0.013 | |
| ras protein signal transduction | GO:0007265 | 73 | 0.013 | |
| regulation of secretion | GO:0051046 | 194 | 0.013 | |
| atp metabolic process | GO:0046034 | 176 | 0.013 | |
| mitochondrial translation | GO:0032543 | 17 | 0.013 | |
| l serine catabolic process | GO:0006565 | 3 | 0.013 | |
| cellular response to glucose starvation | GO:0042149 | 8 | 0.013 | |
| neurotransmitter secretion | GO:0007269 | 4 | 0.013 | |
| response to steroid hormone | GO:0048545 | 80 | 0.013 | |
| cellular modified amino acid metabolic process | GO:0006575 | 64 | 0.013 | |
| generation of neurons | GO:0048699 | 152 | 0.013 | |
| cellular response to dna damage stimulus | GO:0006974 | 379 | 0.013 | |
| microtubule based process | GO:0007017 | 210 | 0.012 | |
| purine ribonucleotide catabolic process | GO:0009154 | 404 | 0.012 | |
| positive regulation of protein complex assembly | GO:0031334 | 86 | 0.012 | |
| regeneration | GO:0031099 | 4 | 0.012 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 227 | 0.012 | |
| response to light stimulus | GO:0009416 | 87 | 0.012 | |
| associative learning | GO:0008306 | 1 | 0.012 | |
| alcohol metabolic process | GO:0006066 | 114 | 0.012 | |
| purine ribonucleoside metabolic process | GO:0046128 | 437 | 0.012 | |
| d aspartate import | GO:0070779 | 3 | 0.012 | |
| lipid homeostasis | GO:0055088 | 39 | 0.012 | |
| protein processing | GO:0016485 | 226 | 0.012 | |
| positive regulation of purine nucleotide catabolic process | GO:0033123 | 185 | 0.012 | |
| inorganic anion transmembrane transport | GO:0098661 | 47 | 0.012 | |
| actin filament based movement | GO:0030048 | 17 | 0.012 | |
| epithelium development | GO:0060429 | 227 | 0.012 | Mouse |
| protein maturation | GO:0051604 | 233 | 0.012 | |
| ribonucleotide biosynthetic process | GO:0009260 | 81 | 0.012 | |
| tissue morphogenesis | GO:0048729 | 96 | 0.011 | |
| ribose phosphate biosynthetic process | GO:0046390 | 82 | 0.011 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 3 | 0.011 | |
| multi organism reproductive process | GO:0044703 | 54 | 0.011 | Worm |
| regulation of actin filament length | GO:0030832 | 56 | 0.011 | |
| regulation of hormone levels | GO:0010817 | 125 | 0.011 | |
| receptor mediated endocytosis | GO:0006898 | 84 | 0.011 | |
| embryonic eye morphogenesis | GO:0048048 | 2 | 0.011 | |
| ossification | GO:0001503 | 121 | 0.011 | |
| positive regulation of nucleotide catabolic process | GO:0030813 | 185 | 0.011 | |
| negative regulation of developmental process | GO:0051093 | 247 | 0.011 | |
| regulation of microtubule based process | GO:0032886 | 74 | 0.011 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 353 | 0.011 | |
| cardiovascular system development | GO:0072358 | 262 | 0.011 | |
| organelle assembly | GO:0070925 | 176 | 0.011 | |
| regulation of cellular protein catabolic process | GO:1903362 | 96 | 0.011 | |
| peptidyl serine phosphorylation | GO:0018105 | 101 | 0.011 | |
| regulation of peptidyl serine phosphorylation | GO:0033135 | 50 | 0.011 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 156 | 0.011 | |
| actin filament based process | GO:0030029 | 224 | 0.011 | |
| regulation of cell division | GO:0051302 | 116 | 0.011 | |
| regulation of protein processing | GO:0070613 | 150 | 0.011 | |
| response to sucrose | GO:0009744 | 1 | 0.011 | |
| gtp catabolic process | GO:0006184 | 237 | 0.011 | |
| regulation of circadian sleep wake cycle sleep | GO:0045187 | 2 | 0.010 | |
| arginine transport | GO:0015809 | 2 | 0.010 | |
| regulation of viral process | GO:0050792 | 103 | 0.010 | |
| cell adhesion | GO:0007155 | 325 | 0.010 | |
| cellular response to nutrient levels | GO:0031669 | 69 | 0.010 | |
| eye photoreceptor cell differentiation | GO:0001754 | 2 | 0.010 | |
| metencephalon development | GO:0022037 | 2 | 0.010 | Mouse |
| response to interferon gamma | GO:0034341 | 39 | 0.010 | |
| circadian behavior | GO:0048512 | 2 | 0.010 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 102 | 0.010 | |
| regulation of nucleotide metabolic process | GO:0006140 | 269 | 0.010 | |
| t cell differentiation in thymus | GO:0033077 | 4 | 0.010 | |
| regulation of cell differentiation | GO:0045595 | 393 | 0.010 | |
| positive regulation of immune system process | GO:0002684 | 283 | 0.010 | |
| cardiac muscle cell contraction | GO:0086003 | 4 | 0.010 | |
| spindle elongation | GO:0051231 | 4 | 0.010 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 7 | 0.010 | |
| neuron development | GO:0048666 | 113 | 0.010 | |
