| rna processing | GO:0006396 | 255 | 0.943 | |
| mrna processing | GO:0006397 | 133 | 0.852 | |
| post embryonic development | GO:0009791 | 2 | 0.766 | |
| rna splicing | GO:0008380 | 131 | 0.758 | |
| mrna metabolic process | GO:0016071 | 175 | 0.667 | |
| dna templated transcription initiation | GO:0006352 | 35 | 0.650 | |
| amine metabolic process | GO:0009308 | 44 | 0.582 | |
| mrna splicing via spliceosome | GO:0000398 | 89 | 0.569 | |
| regulation of cellular component biogenesis | GO:0044087 | 281 | 0.470 | |
| cellular amino acid metabolic process | GO:0006520 | 116 | 0.387 | |
| regulation of rna splicing | GO:0043484 | 62 | 0.378 | |
| regulation of protein complex assembly | GO:0043254 | 147 | 0.375 | |
| female gamete generation | GO:0007292 | 2 | 0.287 | |
| cellular ketone metabolic process | GO:0042180 | 80 | 0.265 | |
| cellular amine metabolic process | GO:0044106 | 41 | 0.263 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 89 | 0.237 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 213 | 0.236 | |
| embryo development | GO:0009790 | 123 | 0.231 | |
| regulation of mrna processing | GO:0050684 | 48 | 0.231 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 50 | 0.214 | |
| regulation of cellular amine metabolic process | GO:0033238 | 11 | 0.192 | |
| regulation of mrna metabolic process | GO:1903311 | 53 | 0.163 | |
| cellular macromolecule catabolic process | GO:0044265 | 380 | 0.155 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 27 | 0.148 | |
| rna splicing via transesterification reactions | GO:0000375 | 90 | 0.135 | |
| protein modification by small protein conjugation | GO:0032446 | 342 | 0.127 | |
| negative regulation of cellular component organization | GO:0051129 | 235 | 0.119 | |
| peptidyl lysine acetylation | GO:0018394 | 101 | 0.117 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 22 | 0.099 | |
| negative regulation of organelle organization | GO:0010639 | 126 | 0.095 | |
| regulation of meiotic cell cycle | GO:0051445 | 4 | 0.090 | |
| cell morphogenesis | GO:0000902 | 296 | 0.090 | |
| negative regulation of developmental process | GO:0051093 | 247 | 0.090 | |
| cellular component disassembly | GO:0022411 | 92 | 0.083 | |
| regulation of cell differentiation | GO:0045595 | 393 | 0.078 | |
| regulation of transcription by chromatin organization | GO:0034401 | 1 | 0.075 | |
| cell division | GO:0051301 | 168 | 0.074 | |
| protein modification by small protein removal | GO:0070646 | 92 | 0.073 | |
| chromatin assembly | GO:0031497 | 61 | 0.072 | |
| protein processing | GO:0016485 | 226 | 0.068 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.065 | |
| chromatin modification | GO:0016568 | 298 | 0.062 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.061 | |
| spliceosomal complex assembly | GO:0000245 | 17 | 0.060 | |
| regulation of cell cycle process | GO:0010564 | 266 | 0.059 | |
| microtubule cytoskeleton organization | GO:0000226 | 176 | 0.057 | |
| cytoplasmic transport | GO:0016482 | 379 | 0.056 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 286 | 0.054 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 353 | 0.054 | |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.053 | |
| multicellular organismal aging | GO:0010259 | 3 | 0.052 | |
| negative regulation of chromosome organization | GO:2001251 | 48 | 0.051 | |
| oocyte development | GO:0048599 | 1 | 0.050 | |
| determination of adult lifespan | GO:0008340 | 2 | 0.050 | |
| histone exchange | GO:0043486 | 3 | 0.048 | |
| oogenesis | GO:0048477 | 2 | 0.048 | |
| nucleosome organization | GO:0034728 | 66 | 0.046 | |
| nuclear export | GO:0051168 | 69 | 0.045 | |
| purine nucleotide catabolic process | GO:0006195 | 405 | 0.044 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 6 | 0.044 | |
| nervous system development | GO:0007399 | 293 | 0.043 | |
| dna conformation change | GO:0071103 | 113 | 0.043 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 116 | 0.043 | |
| cell development | GO:0048468 | 328 | 0.043 | |
| proteasomal protein catabolic process | GO:0010498 | 176 | 0.041 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.040 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 98 | 0.039 | |
| nuclear transport | GO:0051169 | 179 | 0.038 | |
| stem cell differentiation | GO:0048863 | 93 | 0.038 | |
| reproduction | GO:0000003 | 63 | 0.037 | |
| regulation of meiosis | GO:0040020 | 3 | 0.036 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 412 | 0.036 | |
| cellular component morphogenesis | GO:0032989 | 314 | 0.035 | |
| chromatin remodeling | GO:0006338 | 55 | 0.035 | |
| dna packaging | GO:0006323 | 77 | 0.034 | |
| regulation of cell morphogenesis | GO:0022604 | 153 | 0.034 | |
| neural tube closure | GO:0001843 | 3 | 0.034 | |
| reproductive process | GO:0022414 | 106 | 0.033 | |
| rna interference | GO:0016246 | 4 | 0.033 | |
| cellular protein catabolic process | GO:0044257 | 261 | 0.033 | |
| negative regulation of protein metabolic process | GO:0051248 | 391 | 0.032 | |
| negative regulation of protein processing | GO:0010955 | 142 | 0.032 | |
| regulation of protein processing | GO:0070613 | 150 | 0.031 | |
| regulation of dna metabolic process | GO:0051052 | 153 | 0.030 | |
| positive regulation of intracellular protein transport | GO:0090316 | 76 | 0.030 | |
| mrna catabolic process | GO:0006402 | 56 | 0.029 | |
| negative regulation of multicellular organismal process | GO:0051241 | 317 | 0.029 | |
| negative regulation of catalytic activity | GO:0043086 | 335 | 0.029 | |
| macromolecular complex disassembly | GO:0032984 | 60 | 0.029 | |
| regulation of chromatin modification | GO:1903308 | 51 | 0.029 | |
| cellular response to oxygen containing compound | GO:1901701 | 276 | 0.029 | |
| response to lipid | GO:0033993 | 206 | 0.028 | |
| nucleocytoplasmic transport | GO:0006913 | 176 | 0.028 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 186 | 0.028 | |
| regulation of proteolysis | GO:0030162 | 293 | 0.028 | |
| nuclear division | GO:0000280 | 128 | 0.028 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 158 | 0.028 | |
| receptor mediated endocytosis | GO:0006898 | 84 | 0.028 | |
| response to oxygen containing compound | GO:1901700 | 369 | 0.028 | |
| regulation of chromatin organization | GO:1902275 | 56 | 0.027 | |
| apoptotic signaling pathway | GO:0097190 | 268 | 0.027 | |
| negative regulation of cellular amino acid metabolic process | GO:0045763 | 2 | 0.027 | |
| negative regulation of histone modification | GO:0031057 | 19 | 0.027 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 48 | 0.027 | |
| negative regulation of protein maturation | GO:1903318 | 142 | 0.026 | |
| response to biotic stimulus | GO:0009607 | 276 | 0.026 | |
| negative regulation of hydrolase activity | GO:0051346 | 182 | 0.025 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 175 | 0.025 | |
| regulation of intracellular transport | GO:0032386 | 195 | 0.025 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 127 | 0.025 | |
| organ morphogenesis | GO:0009887 | 147 | 0.024 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 183 | 0.024 | |
| intracellular protein transport | GO:0006886 | 270 | 0.024 | |
| atp metabolic process | GO:0046034 | 176 | 0.023 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 7 | 0.023 | |
| negative regulation of proteolysis | GO:0045861 | 132 | 0.022 | |
| response to acid chemical | GO:0001101 | 66 | 0.021 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 391 | 0.021 | |
| response to abiotic stimulus | GO:0009628 | 336 | 0.021 | |
| response to cytokine | GO:0034097 | 232 | 0.021 | |
| purine containing compound catabolic process | GO:0072523 | 411 | 0.021 | |
| spermatid development | GO:0007286 | 4 | 0.020 | |
| response to nitrogen compound | GO:1901698 | 184 | 0.020 | |
| chromatin assembly or disassembly | GO:0006333 | 78 | 0.020 | |
| response to alcohol | GO:0097305 | 64 | 0.019 | |
| single organism cellular localization | GO:1902580 | 332 | 0.019 | |
| regulation of establishment of protein localization | GO:0070201 | 242 | 0.019 | |
| regulation of chromosome organization | GO:0033044 | 103 | 0.019 | |
| regulation of nuclear division | GO:0051783 | 65 | 0.019 | |
| endocytosis | GO:0006897 | 159 | 0.019 | |
| translation | GO:0006412 | 132 | 0.019 | |
| protein localization to organelle | GO:0033365 | 280 | 0.019 | |
| protein complex disassembly | GO:0043241 | 52 | 0.018 | |
| chromatin organization | GO:0006325 | 351 | 0.018 | |
| neuron development | GO:0048666 | 113 | 0.018 | |
| positive regulation of cell death | GO:0010942 | 263 | 0.018 | |
| organelle fission | GO:0048285 | 149 | 0.018 | |
| negative regulation of cell death | GO:0060548 | 345 | 0.018 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 212 | 0.017 | |
| protein acylation | GO:0043543 | 138 | 0.017 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 156 | 0.017 | |
| regulation of growth | GO:0040008 | 165 | 0.017 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 186 | 0.017 | |
| protein maturation | GO:0051604 | 233 | 0.017 | |
| regulation of histone acetylation | GO:0035065 | 19 | 0.017 | |
| single organism reproductive process | GO:0044702 | 98 | 0.017 | |
| response to bacterium | GO:0009617 | 144 | 0.016 | |
| establishment or maintenance of microtubule cytoskeleton polarity | GO:0030951 | 2 | 0.016 | |
| regulation of cytoplasmic transport | GO:1903649 | 149 | 0.016 | |
| response to other organism | GO:0051707 | 261 | 0.016 | |
| positive regulation of developmental process | GO:0051094 | 314 | 0.016 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 244 | 0.016 | |
| regulation of organelle assembly | GO:1902115 | 40 | 0.016 | |
| nuclear import | GO:0051170 | 106 | 0.016 | |
| regulation of multi organism process | GO:0043900 | 157 | 0.016 | |
| negative regulation of protein modification process | GO:0031400 | 200 | 0.016 | |
| positive regulation of chromosome organization | GO:2001252 | 41 | 0.015 | |
| positive regulation of programmed cell death | GO:0043068 | 249 | 0.015 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 40 | 0.015 | |
| protein catabolic process | GO:0030163 | 325 | 0.015 | |
| regulation of chromatin assembly | GO:0010847 | 2 | 0.015 | |
| regulation of histone modification | GO:0031056 | 47 | 0.015 | |
| multicellular organismal reproductive process | GO:0048609 | 40 | 0.015 | |
| positive regulation of cell cycle | GO:0045787 | 140 | 0.015 | |
| regulation of microtubule based process | GO:0032886 | 74 | 0.015 | |
| chromosome segregation | GO:0007059 | 114 | 0.014 | |
| positive regulation of organelle organization | GO:0010638 | 195 | 0.014 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 281 | 0.014 | |
| regulation of peptidyl lysine acetylation | GO:2000756 | 22 | 0.014 | |
| protein targeting to nucleus | GO:0044744 | 104 | 0.014 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 412 | 0.014 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 206 | 0.014 | |
| negative regulation of cell differentiation | GO:0045596 | 171 | 0.014 | |
| posttranscriptional gene silencing | GO:0016441 | 25 | 0.014 | |
| regulation of intracellular protein transport | GO:0033157 | 123 | 0.014 | |
| negative regulation of cell cycle process | GO:0010948 | 121 | 0.014 | |
| nucleotide catabolic process | GO:0009166 | 408 | 0.014 | |
| membrane organization | GO:0061024 | 292 | 0.014 | |
| protein dna complex subunit organization | GO:0071824 | 80 | 0.013 | |
| protein stabilization | GO:0050821 | 64 | 0.013 | |
| negative regulation of cellular amine metabolic process | GO:0033239 | 3 | 0.013 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 81 | 0.013 | |
| cell growth | GO:0016049 | 160 | 0.013 | |
| ameboidal type cell migration | GO:0001667 | 135 | 0.013 | |
| organophosphate catabolic process | GO:0046434 | 430 | 0.013 | |
| chromosome separation | GO:0051304 | 23 | 0.012 | |
| reproductive structure development | GO:0048608 | 55 | 0.012 | |
| developmental process involved in reproduction | GO:0003006 | 66 | 0.012 | |
| sex differentiation | GO:0007548 | 45 | 0.012 | |
| neurogenesis | GO:0022008 | 169 | 0.012 | |
| cellular response to lipid | GO:0071396 | 127 | 0.012 | |
| response to endoplasmic reticulum stress | GO:0034976 | 49 | 0.012 | |
| regulation of dna dependent dna replication | GO:0090329 | 19 | 0.012 | |
| regulation of cellular respiration | GO:0043457 | 4 | 0.012 | |
| positive regulation of cellular component organization | GO:0051130 | 376 | 0.012 | |
| mitochondrial respiratory chain complex assembly | GO:0033108 | 23 | 0.012 | |
| nitrogen compound transport | GO:0071705 | 191 | 0.012 | |
| somitogenesis | GO:0001756 | 2 | 0.012 | |
| multi organism cellular process | GO:0044764 | 156 | 0.012 | |
| regulation of dna templated transcription initiation | GO:2000142 | 9 | 0.012 | |
| atp dependent chromatin remodeling | GO:0043044 | 25 | 0.011 | |
| regulation of protein depolymerization | GO:1901879 | 22 | 0.011 | |
| behavior | GO:0007610 | 112 | 0.011 | |
| negative regulation of apoptotic process | GO:0043066 | 316 | 0.011 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 97 | 0.011 | |
| oocyte differentiation | GO:0009994 | 2 | 0.011 | |
| rna catabolic process | GO:0006401 | 71 | 0.011 | |
| establishment of rna localization | GO:0051236 | 39 | 0.011 | |
| negative regulation of protein complex assembly | GO:0031333 | 43 | 0.011 | |
| cellular response to alcohol | GO:0097306 | 29 | 0.011 | |
| regulation of cell cycle | GO:0051726 | 393 | 0.011 | |
| dna templated transcription termination | GO:0006353 | 3 | 0.011 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 267 | 0.011 | |
| immune response | GO:0006955 | 307 | 0.011 | |
| interspecies interaction between organisms | GO:0044419 | 156 | 0.011 | |
| regeneration | GO:0031099 | 4 | 0.011 | |
| modification dependent protein catabolic process | GO:0019941 | 209 | 0.011 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 72 | 0.011 | |
| protein oligomerization | GO:0051259 | 173 | 0.011 | |
| locomotory behavior | GO:0007626 | 1 | 0.011 | |
| regulation of dna replication | GO:0006275 | 68 | 0.011 | |
| spermatid differentiation | GO:0048515 | 4 | 0.010 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 267 | 0.010 | |
| glycosyl compound catabolic process | GO:1901658 | 413 | 0.010 | |
| mitotic cell cycle phase transition | GO:0044772 | 162 | 0.010 | |
| regulation of cellular protein catabolic process | GO:1903362 | 96 | 0.010 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 89 | 0.010 | |
| regulation of translation | GO:0006417 | 89 | 0.010 | |
| negative regulation of programmed cell death | GO:0043069 | 321 | 0.010 | |
| innate immune response | GO:0045087 | 178 | 0.010 | |
| negative regulation of protein ubiquitination | GO:0031397 | 35 | 0.010 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 411 | 0.010 | |
