| dna replication initiation | GO:0006270 | 6 | 0.994 | Yeast |
| dna replication | GO:0006260 | 116 | 0.988 | Yeast Fly |
| dna dependent dna replication | GO:0006261 | 44 | 0.987 | Yeast |
| mitotic cell cycle phase transition | GO:0044772 | 162 | 0.953 | Fly |
| dna conformation change | GO:0071103 | 113 | 0.941 | Fly |
| cell cycle g2 m phase transition | GO:0044839 | 43 | 0.748 | |
| mitotic sister chromatid segregation | GO:0000070 | 53 | 0.711 | |
| post embryonic development | GO:0009791 | 2 | 0.660 | |
| regulation of mitotic cell cycle | GO:0007346 | 189 | 0.618 | Fly |
| dna geometric change | GO:0032392 | 32 | 0.496 | Fly |
| dna duplex unwinding | GO:0032508 | 30 | 0.488 | Fly |
| mitotic cell cycle checkpoint | GO:0007093 | 68 | 0.480 | Fly |
| sister chromatid segregation | GO:0000819 | 54 | 0.466 | |
| double strand break repair | GO:0006302 | 101 | 0.456 | Yeast |
| meiosis i | GO:0007127 | 4 | 0.416 | |
| mitotic nuclear division | GO:0007067 | 119 | 0.414 | |
| cellular response to dna damage stimulus | GO:0006974 | 379 | 0.398 | Yeast Fly |
| dna packaging | GO:0006323 | 77 | 0.381 | Fly |
| positive regulation of cell cycle process | GO:0090068 | 106 | 0.326 | Fly |
| cell cycle phase transition | GO:0044770 | 173 | 0.323 | Fly |
| dna recombination | GO:0006310 | 77 | 0.316 | Yeast |
| regulation of cell cycle phase transition | GO:1901987 | 126 | 0.305 | Fly |
| cellular amino acid metabolic process | GO:0006520 | 116 | 0.292 | |
| g2 m transition of mitotic cell cycle | GO:0000086 | 41 | 0.274 | |
| dna biosynthetic process | GO:0071897 | 40 | 0.270 | Fly |
| chromatin organization | GO:0006325 | 351 | 0.263 | |
| recombinational repair | GO:0000725 | 50 | 0.249 | Yeast |
| dna repair | GO:0006281 | 198 | 0.235 | Yeast |
| regulation of g2 m transition of mitotic cell cycle | GO:0010389 | 20 | 0.232 | |
| chromosome segregation | GO:0007059 | 114 | 0.228 | |
| negative regulation of cell cycle process | GO:0010948 | 121 | 0.227 | Fly |
| regulation of chromosome segregation | GO:0051983 | 44 | 0.213 | |
| protein dna complex subunit organization | GO:0071824 | 80 | 0.211 | Yeast |
| neurogenesis | GO:0022008 | 169 | 0.209 | Fly |
| meiotic chromosome segregation | GO:0045132 | 4 | 0.202 | |
| mitotic cell cycle | GO:0000278 | 326 | 0.180 | Fly |
| cell cycle checkpoint | GO:0000075 | 117 | 0.176 | Fly |
| nuclear division | GO:0000280 | 128 | 0.176 | |
| organelle fission | GO:0048285 | 149 | 0.170 | |
| regulation of cell cycle process | GO:0010564 | 266 | 0.144 | Fly |
| regulation of dna replication | GO:0006275 | 68 | 0.143 | |
| mitotic dna damage checkpoint | GO:0044773 | 28 | 0.136 | Fly |
| regulation of cell cycle | GO:0051726 | 393 | 0.127 | Fly |
| double strand break repair via homologous recombination | GO:0000724 | 50 | 0.125 | Yeast |
| regulation of mitosis | GO:0007088 | 63 | 0.120 | |
| organophosphate catabolic process | GO:0046434 | 430 | 0.120 | |
| purine nucleoside catabolic process | GO:0006152 | 398 | 0.114 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 411 | 0.111 | |
| exit from mitosis | GO:0010458 | 10 | 0.110 | |
| positive regulation of cell cycle | GO:0045787 | 140 | 0.109 | Fly |
| atp catabolic process | GO:0006200 | 157 | 0.105 | |
| nucleoside phosphate catabolic process | GO:1901292 | 412 | 0.105 | |
| cell division | GO:0051301 | 168 | 0.098 | |
| female gamete generation | GO:0007292 | 2 | 0.098 | |
| ribonucleotide catabolic process | GO:0009261 | 405 | 0.095 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 118 | 0.086 | Fly |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.085 | Yeast |
| regulation of dna metabolic process | GO:0051052 | 153 | 0.085 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 50 | 0.083 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.077 | |
| gene silencing | GO:0016458 | 49 | 0.077 | Yeast |
| determination of adult lifespan | GO:0008340 | 2 | 0.077 | |
| centrosome organization | GO:0051297 | 58 | 0.076 | |
| g2 dna damage checkpoint | GO:0031572 | 26 | 0.071 | Fly |
| purine ribonucleoside metabolic process | GO:0046128 | 437 | 0.071 | |
| meiotic chromosome separation | GO:0051307 | 3 | 0.068 | |
| positive regulation of cell proliferation | GO:0008284 | 301 | 0.067 | |
| response to abiotic stimulus | GO:0009628 | 336 | 0.065 | |
| protein catabolic process | GO:0030163 | 325 | 0.064 | |
| protein modification by small protein conjugation | GO:0032446 | 342 | 0.061 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 422 | 0.061 | |
| protein dna complex assembly | GO:0065004 | 64 | 0.060 | Yeast |
| mitotic cell cycle process | GO:1903047 | 286 | 0.059 | Fly |
| response to radiation | GO:0009314 | 151 | 0.058 | |
| peptidyl serine phosphorylation | GO:0018105 | 101 | 0.057 | |
| cell development | GO:0048468 | 328 | 0.057 | Fly |
| chromosome separation | GO:0051304 | 23 | 0.051 | |
| chemical homeostasis | GO:0048878 | 306 | 0.051 | |
| negative regulation of transcription involved in g1 s transition of mitotic cell cycle | GO:0071930 | 2 | 0.049 | |
| positive regulation of mitotic cell cycle | GO:0045931 | 60 | 0.048 | Fly |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 391 | 0.048 | |
| negative regulation of programmed cell death | GO:0043069 | 321 | 0.046 | |
| ribonucleoside catabolic process | GO:0042454 | 406 | 0.046 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 89 | 0.046 | Fly |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 85 | 0.046 | Fly |
| regulation of meiotic cell cycle | GO:0051445 | 4 | 0.044 | |
| negative regulation of apoptotic process | GO:0043066 | 316 | 0.044 | |
| sister chromatid cohesion | GO:0007062 | 24 | 0.041 | |
| regulation of kinase activity | GO:0043549 | 314 | 0.040 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 107 | 0.040 | |
| cellular ketone metabolic process | GO:0042180 | 80 | 0.039 | |
| cell cycle dna replication | GO:0044786 | 11 | 0.039 | Yeast |
| positive regulation of mitotic cell cycle phase transition | GO:1901992 | 19 | 0.038 | Fly |
| regulation of mitotic sister chromatid separation | GO:0010965 | 27 | 0.038 | |
| nucleoside catabolic process | GO:0009164 | 408 | 0.038 | |
| dna damage checkpoint | GO:0000077 | 68 | 0.037 | Fly |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 158 | 0.036 | |
| regulation of dna dependent dna replication initiation | GO:0030174 | 3 | 0.036 | |
| chromosome condensation | GO:0030261 | 15 | 0.036 | Fly |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 392 | 0.035 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 284 | 0.035 | |
| meiotic cell cycle | GO:0051321 | 13 | 0.035 | |
| cellular amine metabolic process | GO:0044106 | 41 | 0.035 | |
| regulation of reactive oxygen species metabolic process | GO:2000377 | 41 | 0.034 | |
| positive regulation of cell division | GO:0051781 | 59 | 0.034 | |
| receptor mediated endocytosis | GO:0006898 | 84 | 0.034 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 206 | 0.034 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 191 | 0.034 | |
| single organism reproductive process | GO:0044702 | 98 | 0.033 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 412 | 0.032 | |
| regulation of nuclear division | GO:0051783 | 65 | 0.031 | |
| endocytosis | GO:0006897 | 159 | 0.031 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 394 | 0.031 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 391 | 0.030 | |
| atp metabolic process | GO:0046034 | 176 | 0.030 | |
| embryo development | GO:0009790 | 123 | 0.030 | Worm |
| regulation of proteolysis | GO:0030162 | 293 | 0.030 | |
| chromatin modification | GO:0016568 | 298 | 0.029 | |
| reproductive process | GO:0022414 | 106 | 0.029 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 73 | 0.029 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 34 | 0.029 | Worm |
| dna integrity checkpoint | GO:0031570 | 71 | 0.029 | Fly |
| deoxyribose phosphate metabolic process | GO:0019692 | 6 | 0.028 | |
| regulation of mitotic sister chromatid segregation | GO:0033047 | 27 | 0.028 | |
| microtubule cytoskeleton organization | GO:0000226 | 176 | 0.028 | |
| nucleotide catabolic process | GO:0009166 | 408 | 0.028 | |
| mitotic dna replication checkpoint | GO:0033314 | 2 | 0.028 | |
| telomere organization | GO:0032200 | 33 | 0.027 | |
| developmental process involved in reproduction | GO:0003006 | 66 | 0.027 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 264 | 0.027 | |
| negative regulation of cell death | GO:0060548 | 345 | 0.027 | |
| peptidyl serine modification | GO:0018209 | 106 | 0.027 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 412 | 0.026 | |
| reproduction | GO:0000003 | 63 | 0.026 | |
| nervous system development | GO:0007399 | 293 | 0.026 | Fly |
| regulation of mitotic metaphase anaphase transition | GO:0030071 | 26 | 0.024 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 267 | 0.023 | |
| positive regulation of dna metabolic process | GO:0051054 | 73 | 0.023 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.023 | |
| reciprocal dna recombination | GO:0035825 | 4 | 0.023 | |
| protein ubiquitination | GO:0016567 | 314 | 0.023 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 187 | 0.022 | |
| cellular response to oxygen levels | GO:0071453 | 55 | 0.022 | |
| purine containing compound catabolic process | GO:0072523 | 411 | 0.022 | |
| purine nucleotide catabolic process | GO:0006195 | 405 | 0.022 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 6 | 0.022 | |
| regulation of exit from mitosis | GO:0007096 | 6 | 0.022 | |
| microtubule based process | GO:0007017 | 210 | 0.021 | |
| response to oxygen levels | GO:0070482 | 100 | 0.021 | |
| positive regulation of growth | GO:0045927 | 58 | 0.021 | |
| chromatin remodeling | GO:0006338 | 55 | 0.021 | |
| spermatid differentiation | GO:0048515 | 4 | 0.020 | |
| endomembrane system organization | GO:0010256 | 196 | 0.020 | |
| metaphase anaphase transition of cell cycle | GO:0044784 | 21 | 0.019 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 102 | 0.019 | |
| sex differentiation | GO:0007548 | 45 | 0.019 | |
| cellular protein catabolic process | GO:0044257 | 261 | 0.019 | |
| cellular macromolecule catabolic process | GO:0044265 | 380 | 0.019 | |
| growth | GO:0040007 | 202 | 0.019 | |
| negative regulation of cellular component organization | GO:0051129 | 235 | 0.019 | |
| spermatid development | GO:0007286 | 4 | 0.018 | |
| reproductive system development | GO:0061458 | 56 | 0.018 | |
| regulation of cellular amine metabolic process | GO:0033238 | 11 | 0.018 | |
| response to decreased oxygen levels | GO:0036293 | 96 | 0.018 | |
| positive regulation of hydrolase activity | GO:0051345 | 331 | 0.018 | |
| regulation of nucleotide catabolic process | GO:0030811 | 205 | 0.018 | |
| regulation of cell division | GO:0051302 | 116 | 0.018 | |
| regulation of chromosome organization | GO:0033044 | 103 | 0.018 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 207 | 0.018 | |
| reactive oxygen species metabolic process | GO:0072593 | 75 | 0.018 | |
| oogenesis | GO:0048477 | 2 | 0.017 | |
| amine metabolic process | GO:0009308 | 44 | 0.017 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 7 | 0.017 | |
| positive regulation of developmental process | GO:0051094 | 314 | 0.017 | |
| anaphase promoting complex dependent proteasomal ubiquitin dependent protein catabolic process | GO:0031145 | 25 | 0.017 | |
| negative regulation of cell cycle | GO:0045786 | 193 | 0.017 | Fly |
| glycosyl compound catabolic process | GO:1901658 | 413 | 0.017 | |
| regulation of cell cycle g2 m phase transition | GO:1902749 | 22 | 0.017 | |
| nucleus localization | GO:0051647 | 1 | 0.016 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 186 | 0.016 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 156 | 0.016 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 186 | 0.016 | |
| regulation of gene expression epigenetic | GO:0040029 | 73 | 0.016 | Yeast |
| microtubule organizing center organization | GO:0031023 | 62 | 0.016 | |
| response to biotic stimulus | GO:0009607 | 276 | 0.016 | |
| regulation of proteasomal protein catabolic process | GO:0061136 | 87 | 0.015 | |
| establishment of nucleus localization | GO:0040023 | 1 | 0.015 | |
| mitotic dna integrity checkpoint | GO:0044774 | 30 | 0.015 | Fly |
| 2 deoxyribonucleotide metabolic process | GO:0009394 | 6 | 0.015 | |
| positive regulation of protein kinase activity | GO:0045860 | 190 | 0.015 | |
| membrane organization | GO:0061024 | 292 | 0.015 | |
| nuclear dna replication | GO:0033260 | 6 | 0.015 | Yeast |
| response to fungus | GO:0009620 | 4 | 0.014 | |
| positive regulation of cell cycle phase transition | GO:1901989 | 22 | 0.014 | Fly |
| modification dependent macromolecule catabolic process | GO:0043632 | 212 | 0.014 | |
| dna unwinding involved in dna replication | GO:0006268 | 2 | 0.014 | |
| positive regulation of programmed cell death | GO:0043068 | 249 | 0.014 | |
| regulation of transferase activity | GO:0051338 | 355 | 0.014 | |
| guanosine containing compound metabolic process | GO:1901068 | 244 | 0.014 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 244 | 0.014 | |
| cell type specific apoptotic process | GO:0097285 | 125 | 0.014 | |
| oocyte differentiation | GO:0009994 | 2 | 0.014 | |
| dna strand elongation involved in dna replication | GO:0006271 | 3 | 0.014 | |
| regulation of centrosome cycle | GO:0046605 | 15 | 0.013 | |
| dephosphorylation | GO:0016311 | 209 | 0.013 | |
| regulation of sister chromatid segregation | GO:0033045 | 27 | 0.013 | |
| positive regulation of catabolic process | GO:0009896 | 310 | 0.013 | |
| telomere maintenance | GO:0000723 | 32 | 0.013 | |
| development of primary sexual characteristics | GO:0045137 | 35 | 0.013 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 159 | 0.013 | |
| negative regulation of mitosis | GO:0045839 | 24 | 0.013 | |
| multicellular organismal aging | GO:0010259 | 3 | 0.013 | |
| myosin filament assembly | GO:0031034 | 2 | 0.013 | |
| actomyosin structure organization | GO:0031032 | 59 | 0.013 | |
| response to hypoxia | GO:0001666 | 96 | 0.013 | |
| actin filament based process | GO:0030029 | 224 | 0.012 | |
| regulation of transcription by chromatin organization | GO:0034401 | 1 | 0.012 | |
| regulation of atp catabolic process | GO:1903289 | 25 | 0.012 | |
| negative regulation of hydrolase activity | GO:0051346 | 182 | 0.012 | |
| gtp metabolic process | GO:0046039 | 239 | 0.012 | |
| centrosome duplication | GO:0051298 | 28 | 0.012 | |
| response to nitrogen compound | GO:1901698 | 184 | 0.012 | |
| organophosphate biosynthetic process | GO:0090407 | 163 | 0.012 | |
| regulation of dna dependent dna replication | GO:0090329 | 19 | 0.012 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 267 | 0.011 | |
| positive regulation of g2 m transition of mitotic cell cycle | GO:0010971 | 8 | 0.011 | |
| response to light stimulus | GO:0009416 | 87 | 0.011 | |
| chromatin silencing | GO:0006342 | 12 | 0.011 | Yeast |
| negative regulation of mitotic cell cycle | GO:0045930 | 102 | 0.011 | Fly |
| metaphase anaphase transition of mitotic cell cycle | GO:0007091 | 21 | 0.011 | |
| cellular response to decreased oxygen levels | GO:0036294 | 51 | 0.011 | |
| positive regulation of dna replication | GO:0045740 | 35 | 0.011 | |
| cd4 positive alpha beta t cell differentiation | GO:0043367 | 4 | 0.011 | |
| organelle localization | GO:0051640 | 84 | 0.011 | |
| dna dependent dna replication maintenance of fidelity | GO:0045005 | 14 | 0.011 | |
| ion homeostasis | GO:0050801 | 230 | 0.011 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 9 | 0.011 | Fly |
| chromatin assembly or disassembly | GO:0006333 | 78 | 0.011 | |
| single organism cellular localization | GO:1902580 | 332 | 0.011 | |
| myosin filament organization | GO:0031033 | 2 | 0.011 | |
| cell adhesion | GO:0007155 | 325 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 376 | 0.010 | |
| cellular response to abiotic stimulus | GO:0071214 | 117 | 0.010 | |
| regulation of microtubule polymerization | GO:0031113 | 12 | 0.010 | |
| humoral immune response | GO:0006959 | 49 | 0.010 | |
| regulation of response to alcohol | GO:1901419 | 5 | 0.010 | |
| regulation of protein ubiquitination | GO:0031396 | 95 | 0.010 | |
| circulatory system development | GO:0072359 | 262 | 0.010 | |
| deoxyribonucleotide metabolic process | GO:0009262 | 6 | 0.010 | |