| oogenesis | GO:0048477 | 2 | 0.959 | |
| cellular response to dna damage stimulus | GO:0006974 | 379 | 0.955 | |
| rna splicing | GO:0008380 | 131 | 0.950 | |
| organelle fission | GO:0048285 | 149 | 0.945 | |
| post embryonic development | GO:0009791 | 2 | 0.942 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 213 | 0.903 | |
| female gamete generation | GO:0007292 | 2 | 0.874 | |
| regulation of translation | GO:0006417 | 89 | 0.864 | |
| nucleic acid transport | GO:0050657 | 39 | 0.847 | |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.829 | |
| translation | GO:0006412 | 132 | 0.828 | |
| regulation of cell differentiation | GO:0045595 | 393 | 0.782 | |
| negative regulation of developmental process | GO:0051093 | 247 | 0.761 | |
| rna stabilization | GO:0043489 | 18 | 0.743 | |
| rna transport | GO:0050658 | 39 | 0.710 | |
| nucleobase containing compound transport | GO:0015931 | 51 | 0.678 | |
| regulation of dna metabolic process | GO:0051052 | 153 | 0.670 | Fly |
| regulation of gene expression epigenetic | GO:0040029 | 73 | 0.651 | Worm Fly |
| intrinsic apoptotic signaling pathway | GO:0097193 | 127 | 0.595 | |
| nuclear export | GO:0051168 | 69 | 0.570 | |
| ossification | GO:0001503 | 121 | 0.556 | |
| primary mirna processing | GO:0031053 | 3 | 0.552 | |
| embryo development | GO:0009790 | 123 | 0.538 | Worm |
| nuclear transport | GO:0051169 | 179 | 0.526 | |
| tripartite regional subdivision | GO:0007351 | 2 | 0.512 | |
| determination of adult lifespan | GO:0008340 | 2 | 0.470 | Fly |
| nitrogen compound transport | GO:0071705 | 191 | 0.465 | |
| rna export from nucleus | GO:0006405 | 33 | 0.441 | |
| rna localization | GO:0006403 | 41 | 0.403 | |
| establishment of rna localization | GO:0051236 | 39 | 0.387 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.387 | |
| translational initiation | GO:0006413 | 48 | 0.369 | |
| response to dsrna | GO:0043331 | 25 | 0.365 | |
| ncrna metabolic process | GO:0034660 | 108 | 0.357 | |
| rna processing | GO:0006396 | 255 | 0.354 | |
| osteoblast differentiation | GO:0001649 | 92 | 0.351 | |
| multicellular organismal aging | GO:0010259 | 3 | 0.350 | Fly |
| regulation of nucleocytoplasmic transport | GO:0046822 | 98 | 0.341 | |
| nucleus organization | GO:0006997 | 28 | 0.336 | |
| gene silencing | GO:0016458 | 49 | 0.334 | |
| negative regulation of cell differentiation | GO:0045596 | 171 | 0.322 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 412 | 0.281 | |
| chromatin assembly or disassembly | GO:0006333 | 78 | 0.274 | Fly |
| response to abiotic stimulus | GO:0009628 | 336 | 0.271 | Mouse |
| nucleocytoplasmic transport | GO:0006913 | 176 | 0.263 | |
| oocyte development | GO:0048599 | 1 | 0.256 | |
| posttranscriptional gene silencing | GO:0016441 | 25 | 0.255 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 81 | 0.252 | |
| stem cell differentiation | GO:0048863 | 93 | 0.251 | |
| viral genome replication | GO:0019079 | 50 | 0.251 | |
| blastoderm segmentation | GO:0007350 | 2 | 0.248 | |
| negative regulation of protein metabolic process | GO:0051248 | 391 | 0.246 | |
| nuclear import | GO:0051170 | 106 | 0.241 | |
| growth | GO:0040007 | 202 | 0.241 | Fly |
| regulation of cellular component biogenesis | GO:0044087 | 281 | 0.238 | Fly |
| nervous system development | GO:0007399 | 293 | 0.237 | Fly |
| mrna export from nucleus | GO:0006406 | 29 | 0.234 | |
| signal transduction by phosphorylation | GO:0023014 | 297 | 0.222 | |
| oocyte differentiation | GO:0009994 | 2 | 0.220 | |
| cell development | GO:0048468 | 328 | 0.219 | Worm Fly |
| regeneration | GO:0031099 | 4 | 0.211 | |
| response to cytokine | GO:0034097 | 232 | 0.209 | |
| mrna stabilization | GO:0048255 | 18 | 0.205 | |
| response to temperature stimulus | GO:0009266 | 22 | 0.189 | Mouse |
| positive regulation of cell differentiation | GO:0045597 | 211 | 0.181 | |
| positive regulation of transferase activity | GO:0051347 | 227 | 0.175 | |
| developmental cell growth | GO:0048588 | 18 | 0.175 | Fly |
| dorsal ventral axis specification | GO:0009950 | 7 | 0.166 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 22 | 0.164 | |
| macromolecule methylation | GO:0043414 | 97 | 0.163 | |
| gene silencing by mirna | GO:0035195 | 23 | 0.157 | |
| regulation of rna stability | GO:0043487 | 23 | 0.152 | |
| stem cell maintenance | GO:0019827 | 19 | 0.146 | |
| cellular component disassembly | GO:0022411 | 92 | 0.145 | |
| anterior posterior axis specification | GO:0009948 | 2 | 0.145 | |
| cell growth | GO:0016049 | 160 | 0.143 | Fly |
| defense response | GO:0006952 | 315 | 0.142 | |
| production of sirna involved in rna interference | GO:0030422 | 3 | 0.136 | |
| mrna processing | GO:0006397 | 133 | 0.134 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.130 | |
| cytoplasmic transport | GO:0016482 | 379 | 0.127 | |
| signal transduction by p53 class mediator | GO:0072331 | 72 | 0.127 | |
| dna conformation change | GO:0071103 | 113 | 0.126 | Fly |
| regionalization | GO:0003002 | 29 | 0.124 | |
| rna interference | GO:0016246 | 4 | 0.121 | |
| regulation of translational initiation | GO:0006446 | 24 | 0.120 | |
| mitochondrial respiratory chain complex assembly | GO:0033108 | 23 | 0.118 | |
| innate immune response | GO:0045087 | 178 | 0.118 | |
| protein stabilization | GO:0050821 | 64 | 0.117 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 353 | 0.115 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 186 | 0.109 | |
| regulation of meiosis | GO:0040020 | 3 | 0.108 | |
| nuclear division | GO:0000280 | 128 | 0.106 | |
| dna recombination | GO:0006310 | 77 | 0.106 | |
| histone methylation | GO:0016571 | 60 | 0.106 | |
| dna replication | GO:0006260 | 116 | 0.105 | |
| behavior | GO:0007610 | 112 | 0.105 | Fly |
| nucleoside monophosphate metabolic process | GO:0009123 | 191 | 0.104 | |
| interspecies interaction between organisms | GO:0044419 | 156 | 0.103 | |
| single organism reproductive process | GO:0044702 | 98 | 0.102 | Worm |
| dna packaging | GO:0006323 | 77 | 0.100 | Fly |
| rna splicing via transesterification reactions | GO:0000375 | 90 | 0.099 | |
| atp metabolic process | GO:0046034 | 176 | 0.098 | |
| anterior posterior axis specification embryo | GO:0008595 | 2 | 0.095 | |
| meiotic nuclear division | GO:0007126 | 10 | 0.093 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 412 | 0.092 | |
| positive regulation of cell death | GO:0010942 | 263 | 0.090 | |
| viral life cycle | GO:0019058 | 132 | 0.089 | |
| reproduction | GO:0000003 | 63 | 0.084 | Worm Fly |
| viral process | GO:0016032 | 146 | 0.083 | |
| nucleoside catabolic process | GO:0009164 | 408 | 0.080 | |
| endocytosis | GO:0006897 | 159 | 0.079 | |
| methylation | GO:0032259 | 106 | 0.078 | |
| multi organism cellular process | GO:0044764 | 156 | 0.077 | |
| regulation of mrna metabolic process | GO:1903311 | 53 | 0.075 | |
| mrna transport | GO:0051028 | 30 | 0.073 | |
| ribonucleoprotein complex assembly | GO:0022618 | 78 | 0.073 | |
| negative regulation of gene silencing by rna | GO:0060967 | 3 | 0.073 | |
| mitotic nuclear division | GO:0007067 | 119 | 0.071 | |
| negative regulation of translation | GO:0017148 | 37 | 0.071 | |
| meiotic chromosome segregation | GO:0045132 | 4 | 0.069 | |
| crd mediated mrna stabilization | GO:0070934 | 5 | 0.068 | |
| single organism nuclear import | GO:1902593 | 104 | 0.066 | |
| regulation of cytoplasmic transport | GO:1903649 | 149 | 0.066 | |
| negative regulation of multicellular organismal process | GO:0051241 | 317 | 0.065 | |
| ncrna processing | GO:0034470 | 83 | 0.065 | |
| microtubule organizing center organization | GO:0031023 | 62 | 0.065 | |
| positive regulation of immune system process | GO:0002684 | 283 | 0.064 | |
| pattern specification process | GO:0007389 | 43 | 0.064 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.064 | |
| cellular macromolecule catabolic process | GO:0044265 | 380 | 0.063 | |
| regulation of intracellular transport | GO:0032386 | 195 | 0.063 | |
| regulation of intracellular protein transport | GO:0033157 | 123 | 0.061 | |
| spermatid differentiation | GO:0048515 | 4 | 0.061 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 394 | 0.060 | |
| regulation of viral process | GO:0050792 | 103 | 0.060 | |
| positive regulation of translation | GO:0045727 | 35 | 0.059 | |
| hemopoiesis | GO:0030097 | 180 | 0.058 | |
| rna catabolic process | GO:0006401 | 71 | 0.058 | |
| skeletal system development | GO:0001501 | 79 | 0.058 | |
| regulation of viral genome replication | GO:0045069 | 48 | 0.057 | |
| sex differentiation | GO:0007548 | 45 | 0.057 | |
| purine ribonucleoside metabolic process | GO:0046128 | 437 | 0.056 | |
| sleep | GO:0030431 | 2 | 0.055 | |
| regulation of transcription by chromatin organization | GO:0034401 | 1 | 0.055 | |
| meiotic cell cycle | GO:0051321 | 13 | 0.054 | |
| generation of neurons | GO:0048699 | 152 | 0.053 | Fly |
| regulation of proteolysis | GO:0030162 | 293 | 0.053 | |
| regulation of mrna processing | GO:0050684 | 48 | 0.052 | |
| response to heat | GO:0009408 | 21 | 0.052 | Mouse |
| ribonucleotide catabolic process | GO:0009261 | 405 | 0.052 | |
| purine ribonucleoside catabolic process | GO:0046130 | 398 | 0.052 | |
| nuclear migration | GO:0007097 | 1 | 0.050 | |
| gonad development | GO:0008406 | 34 | 0.050 | |
| regulation of developmental growth | GO:0048638 | 30 | 0.050 | |
| regulation of protein stability | GO:0031647 | 87 | 0.050 | |
| neuromuscular junction development | GO:0007528 | 3 | 0.049 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 186 | 0.047 | |
| stem cell development | GO:0048864 | 69 | 0.047 | |
| multicellular organism reproduction | GO:0032504 | 42 | 0.046 | Worm Fly |
| developmental growth | GO:0048589 | 48 | 0.046 | Fly |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 211 | 0.046 | |
| intracellular protein transport | GO:0006886 | 270 | 0.045 | |
| positive regulation of programmed cell death | GO:0043068 | 249 | 0.044 | |
| positive regulation of developmental process | GO:0051094 | 314 | 0.043 | |
| small gtpase mediated signal transduction | GO:0007264 | 78 | 0.043 | |
| cellular response to interferon gamma | GO:0071346 | 24 | 0.042 | |
| cellular protein complex assembly | GO:0043623 | 188 | 0.042 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 158 | 0.042 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 25 | 0.041 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 158 | 0.041 | Fly |
| axon development | GO:0061564 | 34 | 0.040 | Fly |
| neuron projection extension | GO:1990138 | 14 | 0.040 | Fly |
| regulation of cellular response to stress | GO:0080135 | 244 | 0.040 | |
| axon extension | GO:0048675 | 13 | 0.039 | Fly |
| regulation of cell cycle phase transition | GO:1901987 | 126 | 0.039 | |
| development of primary sexual characteristics | GO:0045137 | 35 | 0.038 | |
| covalent chromatin modification | GO:0016569 | 254 | 0.038 | |
| cellular process involved in reproduction in multicellular organism | GO:0022412 | 15 | 0.038 | Worm |
| production of mirnas involved in gene silencing by mirna | GO:0035196 | 12 | 0.038 | |
| axis specification | GO:0009798 | 12 | 0.037 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 158 | 0.037 | |
| positive regulation of organelle organization | GO:0010638 | 195 | 0.037 | Fly |
| nucleotide catabolic process | GO:0009166 | 408 | 0.037 | |
| regulation of binding | GO:0051098 | 111 | 0.037 | |
| lipid localization | GO:0010876 | 106 | 0.036 | |
| regulation of symbiosis encompassing mutualism through parasitism | GO:0043903 | 109 | 0.036 | |
| response to interferon gamma | GO:0034341 | 39 | 0.036 | |
| mrna metabolic process | GO:0016071 | 175 | 0.035 | |
| reproductive process | GO:0022414 | 106 | 0.035 | Worm Fly |
| chromatin organization | GO:0006325 | 351 | 0.035 | Fly |
| chordate embryonic development | GO:0043009 | 34 | 0.034 | |
| membrane organization | GO:0061024 | 292 | 0.034 | |
| chromatin modification | GO:0016568 | 298 | 0.034 | Fly |
| protein localization to organelle | GO:0033365 | 280 | 0.034 | |
| spermatid development | GO:0007286 | 4 | 0.033 | |
| neuron projection morphogenesis | GO:0048812 | 50 | 0.033 | Fly |
| multicellular organismal reproductive process | GO:0048609 | 40 | 0.033 | Worm Fly |
| immune system development | GO:0002520 | 195 | 0.033 | |
| protein import | GO:0017038 | 130 | 0.033 | |
| dna repair | GO:0006281 | 198 | 0.032 | |
| detection of stimulus | GO:0051606 | 85 | 0.031 | |
| embryonic organ development | GO:0048568 | 36 | 0.031 | |
| regulation of dna binding | GO:0051101 | 37 | 0.031 | |
| neuron differentiation | GO:0030182 | 138 | 0.031 | Fly |
| chromatin silencing | GO:0006342 | 12 | 0.030 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 411 | 0.030 | |
| somatic diversification of immunoglobulins involved in immune response | GO:0002208 | 3 | 0.029 | |
| regulation of cell cycle | GO:0051726 | 393 | 0.029 | |
| nucleoside phosphate catabolic process | GO:1901292 | 412 | 0.029 | |
| regulation of oocyte development | GO:0060281 | 1 | 0.029 | |
| ribonucleoside catabolic process | GO:0042454 | 406 | 0.028 | |
| phagocytosis | GO:0006909 | 42 | 0.028 | |
| cell part morphogenesis | GO:0032990 | 137 | 0.028 | Fly |
| organophosphate catabolic process | GO:0046434 | 430 | 0.028 | |
| cell projection morphogenesis | GO:0048858 | 129 | 0.028 | Fly |
| negative regulation of viral genome replication | GO:0045071 | 35 | 0.027 | |
| mitotic cell cycle process | GO:1903047 | 286 | 0.027 | |
| adult locomotory behavior | GO:0008344 | 1 | 0.027 | |
| cell projection organization | GO:0030030 | 252 | 0.026 | Fly |
| negative regulation of apoptotic process | GO:0043066 | 316 | 0.026 | |
| nucleosome assembly | GO:0006334 | 50 | 0.026 | |
| positive regulation of mrna metabolic process | GO:1903313 | 19 | 0.026 | |
| neuron development | GO:0048666 | 113 | 0.026 | Fly |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 158 | 0.025 | |
| regulation of meiotic cell cycle | GO:0051445 | 4 | 0.025 | |
| negative regulation of cell death | GO:0060548 | 345 | 0.025 | |
| regulation of protein complex assembly | GO:0043254 | 147 | 0.024 | |
| plasma lipoprotein particle clearance | GO:0034381 | 16 | 0.024 | |
| positive regulation of apoptotic process | GO:0043065 | 246 | 0.024 | |
| system process | GO:0003008 | 349 | 0.024 | |
| apoptotic signaling pathway | GO:0097190 | 268 | 0.023 | |
| neurogenesis | GO:0022008 | 169 | 0.023 | Fly |
| nucleoside triphosphate metabolic process | GO:0009141 | 422 | 0.023 | |
| segmentation | GO:0035282 | 4 | 0.023 | |
| positive regulation of protein complex assembly | GO:0031334 | 86 | 0.023 | |
| protein methylation | GO:0006479 | 74 | 0.023 | |
| regulation of multi organism process | GO:0043900 | 157 | 0.022 | |
| mitotic cell cycle phase transition | GO:0044772 | 162 | 0.022 | |
| single organism cellular localization | GO:1902580 | 332 | 0.022 | |
| regulation of protein kinase activity | GO:0045859 | 289 | 0.022 | |
| regulation of transferase activity | GO:0051338 | 355 | 0.022 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 3 | 0.021 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 183 | 0.021 | |
| cellular response to cytokine stimulus | GO:0071345 | 181 | 0.021 | |
| trna processing | GO:0008033 | 23 | 0.021 | |
| negative regulation of growth | GO:0045926 | 97 | 0.021 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 18 | 0.020 | |
| male meiosis | GO:0007140 | 1 | 0.020 | |
| immune response | GO:0006955 | 307 | 0.020 | |
| dna templated transcription termination | GO:0006353 | 3 | 0.020 | |
| nuclear mrna surveillance | GO:0071028 | 4 | 0.020 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 89 | 0.019 | |
| embryonic axis specification | GO:0000578 | 5 | 0.019 | |
| dna dependent dna replication | GO:0006261 | 44 | 0.018 | |
| protein targeting to nucleus | GO:0044744 | 104 | 0.018 | |
| organelle assembly | GO:0070925 | 176 | 0.018 | |
| chromatin remodeling | GO:0006338 | 55 | 0.018 | Fly |
| response to tumor necrosis factor | GO:0034612 | 76 | 0.018 | |
| double strand break repair | GO:0006302 | 101 | 0.018 | |
| protein alkylation | GO:0008213 | 74 | 0.017 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 391 | 0.017 | |
| regulation of cell cycle process | GO:0010564 | 266 | 0.017 | |
| macromolecular complex disassembly | GO:0032984 | 60 | 0.016 | |
| cellular response to dsrna | GO:0071359 | 19 | 0.016 | |
| lymphocyte mediated immunity | GO:0002449 | 48 | 0.016 | |
| positive regulation of mrna processing | GO:0050685 | 17 | 0.016 | |
| glycosyl compound catabolic process | GO:1901658 | 413 | 0.016 | |
| axonogenesis | GO:0007409 | 31 | 0.016 | Fly |
| positive regulation of transport | GO:0051050 | 336 | 0.016 | |
| regulation of nervous system development | GO:0051960 | 88 | 0.015 | |
| histone arginine methylation | GO:0034969 | 6 | 0.015 | |
| regulation of cysteine type endopeptidase activity involved in apoptotic process | GO:0043281 | 116 | 0.015 | |
| neuronal stem cell maintenance | GO:0097150 | 5 | 0.015 | |
| histone lysine methylation | GO:0034968 | 50 | 0.015 | |
| response to uv | GO:0009411 | 73 | 0.015 | |
| establishment of ribosome localization | GO:0033753 | 4 | 0.015 | |
| purine ribonucleotide catabolic process | GO:0009154 | 404 | 0.015 | |
| negative regulation of cell cycle | GO:0045786 | 193 | 0.014 | |
| organelle localization | GO:0051640 | 84 | 0.014 | |
| sister chromatid segregation | GO:0000819 | 54 | 0.014 | |
| dna templated transcription elongation | GO:0006354 | 25 | 0.014 | |
| regulation of protein processing | GO:0070613 | 150 | 0.014 | |
| cell morphogenesis | GO:0000902 | 296 | 0.014 | Fly |
| neuron projection development | GO:0031175 | 106 | 0.014 | Fly |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.013 | |
| receptor mediated endocytosis | GO:0006898 | 84 | 0.013 | |
| dna ligation involved in dna repair | GO:0051103 | 4 | 0.013 | |
| intracellular mrna localization | GO:0008298 | 1 | 0.013 | |
| positive regulation of multi organism process | GO:0043902 | 56 | 0.013 | |
| regulation of establishment of protein localization | GO:0070201 | 242 | 0.013 | |
| signal transduction in response to dna damage | GO:0042770 | 57 | 0.012 | |
| positive regulation of nucleocytoplasmic transport | GO:0046824 | 54 | 0.012 | |
| sexual reproduction | GO:0019953 | 37 | 0.012 | Worm Fly |
| muscle system process | GO:0003012 | 81 | 0.012 | |
| protein targeting | GO:0006605 | 187 | 0.012 | |
| compound eye development | GO:0048749 | 1 | 0.012 | |
| dna geometric change | GO:0032392 | 32 | 0.012 | |
| developmental maturation | GO:0021700 | 28 | 0.012 | |
| response to external biotic stimulus | GO:0043207 | 261 | 0.012 | |
| regulation of centriole replication | GO:0046599 | 7 | 0.012 | |
| muscle cell development | GO:0055001 | 29 | 0.012 | |
| regulation of hematopoietic progenitor cell differentiation | GO:1901532 | 24 | 0.011 | |
| cellular component morphogenesis | GO:0032989 | 314 | 0.011 | Fly |
| negative regulation of cellular component organization | GO:0051129 | 235 | 0.011 | |
| regulation of growth | GO:0040008 | 165 | 0.011 | |
| trna 3 end processing | GO:0042780 | 3 | 0.011 | |
| single organism membrane organization | GO:0044802 | 268 | 0.011 | |
| regulation of nucleotide metabolic process | GO:0006140 | 269 | 0.011 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 391 | 0.011 | |
| cell division | GO:0051301 | 168 | 0.011 | |
| cell maturation | GO:0048469 | 11 | 0.011 | |
| activation of immune response | GO:0002253 | 114 | 0.011 | |
| negative regulation of viral process | GO:0048525 | 66 | 0.011 | |
| negative regulation of protein processing | GO:0010955 | 142 | 0.011 | |
| response to biotic stimulus | GO:0009607 | 276 | 0.010 | |
| maintenance of location | GO:0051235 | 112 | 0.010 | |
| multi organism reproductive process | GO:0044703 | 54 | 0.010 | Worm Fly |
| production of small rna involved in gene silencing by rna | GO:0070918 | 13 | 0.010 | |
| negative regulation of programmed cell death | GO:0043069 | 321 | 0.010 | |
