| rna processing | GO:0006396 | 255 | 0.953 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 116 | 0.909 | |
| post embryonic development | GO:0009791 | 2 | 0.651 | |
| rrna modification | GO:0000154 | 2 | 0.619 | |
| spliceosomal snrnp assembly | GO:0000387 | 28 | 0.423 | |
| ribonucleoprotein complex assembly | GO:0022618 | 78 | 0.410 | |
| oogenesis | GO:0048477 | 2 | 0.356 | |
| ncrna metabolic process | GO:0034660 | 108 | 0.323 | Yeast |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.315 | |
| mrna metabolic process | GO:0016071 | 175 | 0.292 | |
| cell development | GO:0048468 | 328 | 0.182 | |
| rna splicing | GO:0008380 | 131 | 0.159 | |
| oocyte differentiation | GO:0009994 | 2 | 0.157 | |
| female gamete generation | GO:0007292 | 2 | 0.157 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 81 | 0.132 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 213 | 0.126 | |
| mrna splicing via spliceosome | GO:0000398 | 89 | 0.120 | |
| mrna processing | GO:0006397 | 133 | 0.100 | |
| rrna metabolic process | GO:0016072 | 40 | 0.100 | |
| rrna processing | GO:0006364 | 35 | 0.100 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 89 | 0.098 | |
| rna splicing via transesterification reactions | GO:0000375 | 90 | 0.093 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.088 | Worm |
| ncrna processing | GO:0034470 | 83 | 0.085 | |
| reproductive process | GO:0022414 | 106 | 0.083 | |
| oocyte development | GO:0048599 | 1 | 0.082 | |
| ribosome biogenesis | GO:0042254 | 48 | 0.080 | |
| positive regulation of programmed cell death | GO:0043068 | 249 | 0.076 | |
| negative regulation of protein metabolic process | GO:0051248 | 391 | 0.075 | |
| regulation of rna stability | GO:0043487 | 23 | 0.061 | |
| gtp catabolic process | GO:0006184 | 237 | 0.061 | |
| positive regulation of cell death | GO:0010942 | 263 | 0.059 | |
| membrane organization | GO:0061024 | 292 | 0.058 | |
| mitotic cell cycle process | GO:1903047 | 286 | 0.055 | |
| regulation of meiotic cell cycle | GO:0051445 | 4 | 0.048 | |
| regulation of cellular component movement | GO:0051270 | 334 | 0.048 | |
| sex differentiation | GO:0007548 | 45 | 0.047 | |
| endocytosis | GO:0006897 | 159 | 0.047 | Worm |
| regulation of transferase activity | GO:0051338 | 355 | 0.047 | |
| maturation of lsu rrna | GO:0000470 | 3 | 0.045 | |
| mitotic cell cycle | GO:0000278 | 326 | 0.044 | |
| regulation of cell cycle | GO:0051726 | 393 | 0.043 | |
| rna modification | GO:0009451 | 27 | 0.043 | Yeast |
| single organism cellular localization | GO:1902580 | 332 | 0.042 | |
| neuromuscular junction development | GO:0007528 | 3 | 0.042 | |
| single organism reproductive process | GO:0044702 | 98 | 0.041 | |
| reproductive system development | GO:0061458 | 56 | 0.041 | |
| negative regulation of cell death | GO:0060548 | 345 | 0.041 | |
| generation of neurons | GO:0048699 | 152 | 0.039 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 394 | 0.039 | |
| developmental process involved in reproduction | GO:0003006 | 66 | 0.038 | |
| negative regulation of programmed cell death | GO:0043069 | 321 | 0.036 | |
| mitotic nuclear division | GO:0007067 | 119 | 0.036 | |
| cell projection organization | GO:0030030 | 252 | 0.034 | |
| cell division | GO:0051301 | 168 | 0.034 | |
| protein modification by small protein removal | GO:0070646 | 92 | 0.034 | |
| cytoplasmic transport | GO:0016482 | 379 | 0.032 | |
| snrna metabolic process | GO:0016073 | 15 | 0.032 | Yeast |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 412 | 0.032 | |
| organelle localization | GO:0051640 | 84 | 0.030 | |
| regulation of kinase activity | GO:0043549 | 314 | 0.030 | |
| osteoblast differentiation | GO:0001649 | 92 | 0.030 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 353 | 0.030 | |
| regulation of endopeptidase activity | GO:0052548 | 170 | 0.030 | |
| system process | GO:0003008 | 349 | 0.030 | |
| ras protein signal transduction | GO:0007265 | 73 | 0.029 | |
| negative regulation of apoptotic process | GO:0043066 | 316 | 0.029 | |
| small gtpase mediated signal transduction | GO:0007264 | 78 | 0.029 | |
| negative regulation of protein modification process | GO:0031400 | 200 | 0.027 | |
| purine nucleotide catabolic process | GO:0006195 | 405 | 0.027 | |
| hindbrain development | GO:0030902 | 3 | 0.027 | |
| circulatory system development | GO:0072359 | 262 | 0.025 | |
| establishment of organelle localization | GO:0051656 | 59 | 0.025 | |
| regulation of cellular component biogenesis | GO:0044087 | 281 | 0.025 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 412 | 0.024 | |
| cell growth | GO:0016049 | 160 | 0.024 | |
| multicellular organismal aging | GO:0010259 | 3 | 0.024 | |
| regulation of cell differentiation | GO:0045595 | 393 | 0.024 | |
| negative regulation of catalytic activity | GO:0043086 | 335 | 0.024 | |
| neurogenesis | GO:0022008 | 169 | 0.023 | Fly |
| amine metabolic process | GO:0009308 | 44 | 0.023 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 422 | 0.023 | |
| receptor mediated endocytosis | GO:0006898 | 84 | 0.023 | Worm |
| biological adhesion | GO:0022610 | 331 | 0.023 | |
| negative regulation of hydrolase activity | GO:0051346 | 182 | 0.023 | |
| nucleotide catabolic process | GO:0009166 | 408 | 0.023 | |
| locomotory behavior | GO:0007626 | 1 | 0.023 | |
| cellular macromolecule catabolic process | GO:0044265 | 380 | 0.023 | |
| guanosine containing compound metabolic process | GO:1901068 | 244 | 0.022 | |
| organelle assembly | GO:0070925 | 176 | 0.022 | |
| positive regulation of apoptotic process | GO:0043065 | 246 | 0.021 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 303 | 0.021 | |
| secretion | GO:0046903 | 254 | 0.021 | |
| nuclear division | GO:0000280 | 128 | 0.021 | |
| actin filament based process | GO:0030029 | 224 | 0.020 | |
| reproduction | GO:0000003 | 63 | 0.020 | Worm |
| purine nucleoside catabolic process | GO:0006152 | 398 | 0.020 | |
| lipid metabolic process | GO:0006629 | 381 | 0.020 | |
| maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna | GO:0000466 | 2 | 0.020 | |
| cardiovascular system development | GO:0072358 | 262 | 0.020 | |
| development of primary sexual characteristics | GO:0045137 | 35 | 0.020 | |
| reproductive structure development | GO:0048608 | 55 | 0.020 | |
| regulation of meiosis | GO:0040020 | 3 | 0.020 | |
| cellular component morphogenesis | GO:0032989 | 314 | 0.019 | |
| glycosyl compound catabolic process | GO:1901658 | 413 | 0.019 | |
| neuron differentiation | GO:0030182 | 138 | 0.019 | |
| multicellular organism reproduction | GO:0032504 | 42 | 0.019 | |
| cell morphogenesis | GO:0000902 | 296 | 0.019 | |
| response to wounding | GO:0009611 | 168 | 0.018 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 200 | 0.018 | |
| signal transduction by p53 class mediator | GO:0072331 | 72 | 0.018 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 267 | 0.018 | |
| regulation of protein stability | GO:0031647 | 87 | 0.018 | |
| positive regulation of cysteine type endopeptidase activity | GO:2001056 | 79 | 0.018 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 391 | 0.018 | |
| maintenance of location | GO:0051235 | 112 | 0.018 | |
| regulation of protein kinase activity | GO:0045859 | 289 | 0.017 | |
| protein maturation | GO:0051604 | 233 | 0.017 | |
| purine ribonucleotide catabolic process | GO:0009154 | 404 | 0.017 | |
| regulation of cell division | GO:0051302 | 116 | 0.017 | |
| cellular amino acid metabolic process | GO:0006520 | 116 | 0.017 | |
| organelle fission | GO:0048285 | 149 | 0.017 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 6 | 0.017 | |
| multicellular organismal reproductive process | GO:0048609 | 40 | 0.017 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 102 | 0.017 | |
| embryo development | GO:0009790 | 123 | 0.017 | |
| organophosphate catabolic process | GO:0046434 | 430 | 0.017 | |
| regulation of protein localization | GO:0032880 | 296 | 0.016 | |
| regulation of translation | GO:0006417 | 89 | 0.016 | |
| lipid localization | GO:0010876 | 106 | 0.016 | |
| segmentation | GO:0035282 | 4 | 0.016 | |
| determination of adult lifespan | GO:0008340 | 2 | 0.016 | |
| central nervous system development | GO:0007417 | 123 | 0.016 | |
| muscle structure development | GO:0061061 | 98 | 0.016 | |
| sexual reproduction | GO:0019953 | 37 | 0.016 | |
| single organism cell adhesion | GO:0098602 | 179 | 0.015 | |
| growth | GO:0040007 | 202 | 0.015 | |
| neuron development | GO:0048666 | 113 | 0.015 | |
| regulation of cell motility | GO:2000145 | 299 | 0.015 | |
| sulfur compound metabolic process | GO:0006790 | 101 | 0.015 | |
| taxis | GO:0042330 | 157 | 0.015 | |
| regulation of oocyte development | GO:0060281 | 1 | 0.014 | |
| sex determination | GO:0007530 | 3 | 0.014 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 267 | 0.014 | |
| chromatin organization | GO:0006325 | 351 | 0.014 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 179 | 0.014 | |
| purine ribonucleoside catabolic process | GO:0046130 | 398 | 0.014 | |
| macromolecule methylation | GO:0043414 | 97 | 0.014 | |
| ossification | GO:0001503 | 121 | 0.014 | |
| protein stabilization | GO:0050821 | 64 | 0.014 | |
| cytokine production | GO:0001816 | 247 | 0.014 | |
| neuron projection development | GO:0031175 | 106 | 0.013 | |
| protein processing | GO:0016485 | 226 | 0.013 | |
| negative regulation of cell proliferation | GO:0008285 | 228 | 0.013 | |
| positive regulation of hydrolase activity | GO:0051345 | 331 | 0.013 | |
| brain development | GO:0007420 | 97 | 0.013 | |
| hemopoiesis | GO:0030097 | 180 | 0.013 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 286 | 0.013 | |
| regulation of protein catabolic process | GO:0042176 | 155 | 0.013 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 78 | 0.013 | |
| intracellular protein transport | GO:0006886 | 270 | 0.013 | |
| cell adhesion | GO:0007155 | 325 | 0.013 | |
| nucleoside phosphate catabolic process | GO:1901292 | 412 | 0.013 | |
| cell projection morphogenesis | GO:0048858 | 129 | 0.013 | |
| negative regulation of locomotion | GO:0040013 | 118 | 0.013 | |
| urogenital system development | GO:0001655 | 65 | 0.012 | |
| regulation of ras protein signal transduction | GO:0046578 | 155 | 0.012 | |
| cellular response to growth factor stimulus | GO:0071363 | 197 | 0.012 | |
| neuron death | GO:0070997 | 65 | 0.012 | |
| cellular response to oxygen containing compound | GO:1901701 | 276 | 0.012 | |
| ribonucleotide catabolic process | GO:0009261 | 405 | 0.012 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 284 | 0.012 | |
| maturation of ssu rrna | GO:0030490 | 3 | 0.012 | |
| regulation of response to external stimulus | GO:0032101 | 222 | 0.012 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 281 | 0.012 | |
| negative regulation of multicellular organismal process | GO:0051241 | 317 | 0.012 | |
| regulation of protein ubiquitination | GO:0031396 | 95 | 0.012 | |
| positive regulation of cell proliferation | GO:0008284 | 301 | 0.012 | |
| regulation of nucleotide catabolic process | GO:0030811 | 205 | 0.012 | |
| negative regulation of cell differentiation | GO:0045596 | 171 | 0.012 | |
| regulation of cell development | GO:0060284 | 161 | 0.012 | |
| regulation of proteolysis | GO:0030162 | 293 | 0.012 | |
| cell part morphogenesis | GO:0032990 | 137 | 0.011 | |
| cellular response to abiotic stimulus | GO:0071214 | 117 | 0.011 | |
| muscle cell differentiation | GO:0042692 | 63 | 0.011 | |
| multi organism reproductive process | GO:0044703 | 54 | 0.011 | |
| zymogen activation | GO:0031638 | 70 | 0.011 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 186 | 0.011 | |
| gonad development | GO:0008406 | 34 | 0.011 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 230 | 0.011 | |
| response to abiotic stimulus | GO:0009628 | 336 | 0.011 | |
| behavior | GO:0007610 | 112 | 0.011 | |
| protein ubiquitination | GO:0016567 | 314 | 0.011 | |
| response to oxygen containing compound | GO:1901700 | 369 | 0.011 | |
| methylation | GO:0032259 | 106 | 0.011 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 34 | 0.011 | |
| protein catabolic process | GO:0030163 | 325 | 0.011 | |
| negative regulation of cellular response to growth factor stimulus | GO:0090288 | 41 | 0.011 | |
| regulation of cell adhesion | GO:0030155 | 166 | 0.011 | |
| nucleus localization | GO:0051647 | 1 | 0.010 | |
| cellular protein complex assembly | GO:0043623 | 188 | 0.010 | |
| innate immune response | GO:0045087 | 178 | 0.010 | |
| heart development | GO:0007507 | 95 | 0.010 | |
| regulation of ion transport | GO:0043269 | 189 | 0.010 | |
| regulation of gtpase activity | GO:0043087 | 180 | 0.010 | |
| response to external biotic stimulus | GO:0043207 | 261 | 0.010 | |
| protein alkylation | GO:0008213 | 74 | 0.010 | |
| cellular amine metabolic process | GO:0044106 | 41 | 0.010 | |
| regulation of locomotion | GO:0040012 | 329 | 0.010 | |
