| post embryonic development | GO:0009791 | 2 | 0.829 | Fly |
| nls bearing protein import into nucleus | GO:0006607 | 2 | 0.811 | |
| single organism cellular localization | GO:1902580 | 332 | 0.541 | Yeast Mouse Fly |
| response to cytokine | GO:0034097 | 232 | 0.384 | |
| embryo development | GO:0009790 | 123 | 0.280 | |
| protein localization to membrane | GO:0072657 | 160 | 0.250 | |
| amine metabolic process | GO:0009308 | 44 | 0.238 | |
| ribosomal protein import into nucleus | GO:0006610 | 2 | 0.225 | |
| cellular amine metabolic process | GO:0044106 | 41 | 0.222 | |
| regulation of protein localization | GO:0032880 | 296 | 0.218 | |
| growth | GO:0040007 | 202 | 0.210 | |
| single organism nuclear import | GO:1902593 | 104 | 0.202 | Yeast Mouse Fly |
| protein localization to organelle | GO:0033365 | 280 | 0.202 | Yeast Mouse Fly |
| regulation of cell cycle | GO:0051726 | 393 | 0.188 | |
| determination of adult lifespan | GO:0008340 | 2 | 0.186 | |
| establishment of protein localization to organelle | GO:0072594 | 172 | 0.182 | Yeast Mouse Fly |
| cellular amino acid metabolic process | GO:0006520 | 116 | 0.178 | |
| cytoplasmic transport | GO:0016482 | 379 | 0.174 | Yeast Mouse Fly |
| mitotic cell cycle | GO:0000278 | 326 | 0.174 | |
| protein targeting | GO:0006605 | 187 | 0.170 | Yeast Mouse Fly |
| establishment of protein localization to membrane | GO:0090150 | 121 | 0.169 | |
| multicellular organismal aging | GO:0010259 | 3 | 0.167 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.164 | |
| intracellular protein transport | GO:0006886 | 270 | 0.147 | Yeast Mouse Fly |
| single organism membrane organization | GO:0044802 | 268 | 0.135 | |
| protein targeting to nucleus | GO:0044744 | 104 | 0.131 | Yeast Mouse Fly |
| regulation of establishment of protein localization | GO:0070201 | 242 | 0.127 | |
| endocytosis | GO:0006897 | 159 | 0.126 | |
| female gamete generation | GO:0007292 | 2 | 0.123 | |
| regulation of meiotic cell cycle | GO:0051445 | 4 | 0.119 | |
| mitotic nuclear division | GO:0007067 | 119 | 0.118 | |
| lipid metabolic process | GO:0006629 | 381 | 0.113 | |
| nucleocytoplasmic transport | GO:0006913 | 176 | 0.112 | Yeast Mouse Fly |
| neurogenesis | GO:0022008 | 169 | 0.111 | Fly |
| nuclear transport | GO:0051169 | 179 | 0.110 | Yeast Mouse Fly |
| reproduction | GO:0000003 | 63 | 0.110 | |
| cellular response to cytokine stimulus | GO:0071345 | 181 | 0.109 | |
| membrane organization | GO:0061024 | 292 | 0.105 | |
| ncrna metabolic process | GO:0034660 | 108 | 0.103 | |
| microtubule based process | GO:0007017 | 210 | 0.102 | |
| ribosomal small subunit biogenesis | GO:0042274 | 13 | 0.101 | |
| regulation of cellular amine metabolic process | GO:0033238 | 11 | 0.100 | |
| nervous system development | GO:0007399 | 293 | 0.094 | Fly |
| rna interference | GO:0016246 | 4 | 0.092 | |
| secretion | GO:0046903 | 254 | 0.084 | |
| regulation of mitotic cell cycle | GO:0007346 | 189 | 0.084 | |
| rna localization | GO:0006403 | 41 | 0.081 | Yeast |
| positive regulation of cellular amine metabolic process | GO:0033240 | 7 | 0.080 | |
| organelle fission | GO:0048285 | 149 | 0.078 | |
| rna transport | GO:0050658 | 39 | 0.077 | Yeast |
| cellular ketone metabolic process | GO:0042180 | 80 | 0.074 | |
| endomembrane system organization | GO:0010256 | 196 | 0.073 | |
| nuclear import | GO:0051170 | 106 | 0.066 | Yeast Mouse Fly |
| ethanolamine containing compound metabolic process | GO:0042439 | 26 | 0.062 | |
| regulation of protein targeting | GO:1903533 | 91 | 0.061 | |
| mitotic cell cycle process | GO:1903047 | 286 | 0.061 | |
| regulation of protein localization to nucleus | GO:1900180 | 85 | 0.059 | |
| oocyte differentiation | GO:0009994 | 2 | 0.059 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 34 | 0.057 | |
| regulation of protein import into nucleus | GO:0042306 | 78 | 0.057 | |
| protein import | GO:0017038 | 130 | 0.056 | Yeast Mouse Fly |
| lipid biosynthetic process | GO:0008610 | 177 | 0.055 | |
| oogenesis | GO:0048477 | 2 | 0.054 | |
| regulation of protein transport | GO:0051223 | 213 | 0.054 | |
| regulation of intracellular transport | GO:0032386 | 195 | 0.053 | |
| embryonic morphogenesis | GO:0048598 | 85 | 0.053 | |
| receptor mediated endocytosis | GO:0006898 | 84 | 0.052 | |
| nucleobase containing compound transport | GO:0015931 | 51 | 0.051 | Yeast |
| negative regulation of catalytic activity | GO:0043086 | 335 | 0.051 | |
| response to external biotic stimulus | GO:0043207 | 261 | 0.051 | |
| nuclear division | GO:0000280 | 128 | 0.050 | |
| positive regulation of developmental process | GO:0051094 | 314 | 0.050 | |
| regulation of transferase activity | GO:0051338 | 355 | 0.049 | |
| cellular response to organonitrogen compound | GO:0071417 | 124 | 0.048 | |
| regulation of cell cycle process | GO:0010564 | 266 | 0.047 | |
| positive regulation of transport | GO:0051050 | 336 | 0.047 | |
| translation | GO:0006412 | 132 | 0.047 | |
| neuron development | GO:0048666 | 113 | 0.047 | Fly |
| cellular response to oxygen containing compound | GO:1901701 | 276 | 0.046 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 286 | 0.046 | |
| protein folding | GO:0006457 | 38 | 0.046 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 267 | 0.046 | |
| phosphatidylcholine biosynthetic process | GO:0006656 | 9 | 0.045 | |
| positive regulation of protein transport | GO:0051222 | 135 | 0.045 | |
| reproductive structure development | GO:0048608 | 55 | 0.044 | |
| cytokine mediated signaling pathway | GO:0019221 | 109 | 0.044 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.044 | |
| signal transduction by phosphorylation | GO:0023014 | 297 | 0.043 | Fly |
| cell morphogenesis | GO:0000902 | 296 | 0.042 | |
| regeneration | GO:0031099 | 4 | 0.042 | |
| neuron projection development | GO:0031175 | 106 | 0.041 | |
| long term memory | GO:0007616 | 2 | 0.041 | |
| response to oxygen containing compound | GO:1901700 | 369 | 0.040 | |
| immune response | GO:0006955 | 307 | 0.040 | Mouse |
| ribonucleoprotein complex localization | GO:0071166 | 4 | 0.040 | Fly |
| generation of neurons | GO:0048699 | 152 | 0.040 | Fly |
| regulation of cellular amino acid metabolic process | GO:0006521 | 6 | 0.040 | |
| cellular component morphogenesis | GO:0032989 | 314 | 0.040 | |
| rrna metabolic process | GO:0016072 | 40 | 0.040 | |
| sister chromatid segregation | GO:0000819 | 54 | 0.039 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 200 | 0.039 | |
| system process | GO:0003008 | 349 | 0.036 | |
| positive regulation of growth | GO:0045927 | 58 | 0.036 | |
| regulation of cell differentiation | GO:0045595 | 393 | 0.036 | |
| chemotaxis | GO:0006935 | 157 | 0.036 | |
| spermatid development | GO:0007286 | 4 | 0.035 | |
| protein autophosphorylation | GO:0046777 | 123 | 0.035 | |
| transmembrane transport | GO:0055085 | 399 | 0.034 | |
| developmental growth | GO:0048589 | 48 | 0.034 | |
| cell cycle g1 s phase transition | GO:0044843 | 80 | 0.034 | |
| behavior | GO:0007610 | 112 | 0.034 | |
| cellular response to nitrogen compound | GO:1901699 | 144 | 0.034 | |
| defense response | GO:0006952 | 315 | 0.033 | Mouse |
| positive regulation of meiotic cell cycle | GO:0051446 | 2 | 0.033 | |
| cell cycle phase transition | GO:0044770 | 173 | 0.033 | |
| spermatid differentiation | GO:0048515 | 4 | 0.032 | |
| regulation of growth | GO:0040008 | 165 | 0.032 | |
| apoptotic signaling pathway | GO:0097190 | 268 | 0.032 | |
| prenylation | GO:0097354 | 6 | 0.030 | |
| microtubule cytoskeleton organization | GO:0000226 | 176 | 0.030 | |
| response to virus | GO:0009615 | 126 | 0.030 | |
| regulation of cytoplasmic transport | GO:1903649 | 149 | 0.029 | |
| negative regulation of programmed cell death | GO:0043069 | 321 | 0.029 | Fly |
| posttranscriptional regulation of gene expression | GO:0010608 | 213 | 0.029 | |
| response to nitrogen compound | GO:1901698 | 184 | 0.028 | |
| nucleoside catabolic process | GO:0009164 | 408 | 0.028 | |
| single organism reproductive process | GO:0044702 | 98 | 0.028 | |
| reproductive system development | GO:0061458 | 56 | 0.028 | |
| regulation of developmental growth | GO:0048638 | 30 | 0.028 | |
| response to other organism | GO:0051707 | 261 | 0.028 | |
| response to lipopolysaccharide | GO:0032496 | 70 | 0.027 | |
| rna processing | GO:0006396 | 255 | 0.027 | |
| cellular response to endogenous stimulus | GO:0071495 | 336 | 0.027 | |
| cellular response to hormone stimulus | GO:0032870 | 125 | 0.026 | |
| negative regulation of phosphorylation | GO:0042326 | 174 | 0.026 | |
| regulation of lipid metabolic process | GO:0019216 | 96 | 0.026 | |
| regulation of intracellular protein transport | GO:0033157 | 123 | 0.026 | |
| ribonucleoside catabolic process | GO:0042454 | 406 | 0.026 | |
| rna 3 end processing | GO:0031123 | 35 | 0.026 | |
| cellular lipid metabolic process | GO:0044255 | 303 | 0.025 | |
| cell projection organization | GO:0030030 | 252 | 0.025 | |
| protein modification by small protein removal | GO:0070646 | 92 | 0.024 | |
| oocyte development | GO:0048599 | 1 | 0.024 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 98 | 0.024 | |
| positive regulation of cellular catabolic process | GO:0031331 | 284 | 0.024 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 183 | 0.024 | |
| chromatin organization | GO:0006325 | 351 | 0.024 | |
| maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna | GO:0000462 | 1 | 0.023 | |
| developmental process involved in reproduction | GO:0003006 | 66 | 0.023 | |
| spindle organization | GO:0007051 | 53 | 0.023 | |
| posttranscriptional gene silencing | GO:0016441 | 25 | 0.023 | |
| regulation of gene expression epigenetic | GO:0040029 | 73 | 0.023 | |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.022 | |
| organophosphate biosynthetic process | GO:0090407 | 163 | 0.022 | |
| multicellular organismal reproductive process | GO:0048609 | 40 | 0.022 | |
| ncrna processing | GO:0034470 | 83 | 0.022 | |
| protein import into nucleus | GO:0006606 | 104 | 0.022 | Yeast Mouse Fly |
| ion transmembrane transport | GO:0034220 | 338 | 0.021 | |
| maturation of ssu rrna | GO:0030490 | 3 | 0.021 | |
| regulation of locomotion | GO:0040012 | 329 | 0.021 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 353 | 0.021 | |
| gene silencing | GO:0016458 | 49 | 0.021 | |
| regulation of mapk cascade | GO:0043408 | 262 | 0.021 | |
| neuron differentiation | GO:0030182 | 138 | 0.020 | Fly |
| protein catabolic process | GO:0030163 | 325 | 0.020 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 303 | 0.020 | Fly |
| ribosome biogenesis | GO:0042254 | 48 | 0.020 | |
| secretion by cell | GO:0032940 | 226 | 0.020 | |
| regulation of kinase activity | GO:0043549 | 314 | 0.019 | |
| response to lipid | GO:0033993 | 206 | 0.019 | |
| regulation of nervous system development | GO:0051960 | 88 | 0.019 | |
| negative regulation of transferase activity | GO:0051348 | 124 | 0.019 | |
| positive regulation of nucleocytoplasmic transport | GO:0046824 | 54 | 0.019 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 267 | 0.019 | |
| nucleic acid transport | GO:0050657 | 39 | 0.019 | Yeast |
| purine ribonucleoside catabolic process | GO:0046130 | 398 | 0.019 | |
| ribosomal large subunit export from nucleus | GO:0000055 | 3 | 0.018 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 78 | 0.018 | |
| positive regulation of intracellular transport | GO:0032388 | 104 | 0.018 | |
| maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna | GO:0000463 | 3 | 0.018 | |
| mitotic spindle organization | GO:0007052 | 27 | 0.018 | |
| establishment of ribosome localization | GO:0033753 | 4 | 0.018 | |
| centrosome organization | GO:0051297 | 58 | 0.017 | |
| multi organism reproductive process | GO:0044703 | 54 | 0.017 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 186 | 0.017 | |
| glycerolipid metabolic process | GO:0046486 | 107 | 0.017 | |
| regulation of cell division | GO:0051302 | 116 | 0.017 | |
| tissue regeneration | GO:0042246 | 3 | 0.017 | |
| cell division | GO:0051301 | 168 | 0.017 | |
| regulation of neuron projection development | GO:0010975 | 57 | 0.017 | |
| neuromuscular junction development | GO:0007528 | 3 | 0.017 | |
| cellular response to growth factor stimulus | GO:0071363 | 197 | 0.016 | |
| phospholipid metabolic process | GO:0006644 | 99 | 0.016 | |
| protein localization to nucleus | GO:0034504 | 136 | 0.016 | Yeast Mouse Fly |
| negative regulation of apoptotic process | GO:0043066 | 316 | 0.016 | Fly |
| cell development | GO:0048468 | 328 | 0.016 | Fly |
| nucleotide catabolic process | GO:0009166 | 408 | 0.016 | |
| immune system development | GO:0002520 | 195 | 0.016 | |
| response to peptide | GO:1901652 | 65 | 0.016 | |
| cation transmembrane transport | GO:0098655 | 238 | 0.016 | |
| protein oligomerization | GO:0051259 | 173 | 0.016 | |
| cell morphogenesis involved in neuron differentiation | GO:0048667 | 44 | 0.016 | |
| multicellular organism reproduction | GO:0032504 | 42 | 0.016 | |
| regulation of peptidase activity | GO:0052547 | 180 | 0.016 | |
| dna repair | GO:0006281 | 198 | 0.016 | |
| memory | GO:0007613 | 3 | 0.015 | |
| negative regulation of kinase activity | GO:0033673 | 106 | 0.015 | |
| negative regulation of cellular amino acid metabolic process | GO:0045763 | 2 | 0.015 | |
| regulation of protein kinase activity | GO:0045859 | 289 | 0.015 | |
| negative regulation of cell death | GO:0060548 | 345 | 0.015 | Fly |
| meiosis i | GO:0007127 | 4 | 0.015 | |
| negative regulation of cell cycle | GO:0045786 | 193 | 0.015 | |
| response to molecule of bacterial origin | GO:0002237 | 82 | 0.015 | |
| positive regulation of protein import into nucleus | GO:0042307 | 46 | 0.015 | |
| taxis | GO:0042330 | 157 | 0.015 | |
| cellular biogenic amine metabolic process | GO:0006576 | 34 | 0.015 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 127 | 0.015 | |
| positive regulation of cell death | GO:0010942 | 263 | 0.015 | |
| negative regulation of cellular amine metabolic process | GO:0033239 | 3 | 0.015 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 50 | 0.014 | |
| regulation of cell migration | GO:0030334 | 289 | 0.014 | |
| glycerophospholipid metabolic process | GO:0006650 | 84 | 0.014 | |
| cell growth | GO:0016049 | 160 | 0.014 | |
| nitrogen compound transport | GO:0071705 | 191 | 0.014 | Yeast |
| nucleus organization | GO:0006997 | 28 | 0.014 | Fly |
| negative regulation of neuron death | GO:1901215 | 32 | 0.013 | Fly |
| regulation of neuron differentiation | GO:0045664 | 70 | 0.013 | |
| mapk cascade | GO:0000165 | 288 | 0.013 | Fly |
| response to biotic stimulus | GO:0009607 | 276 | 0.013 | |
| purine containing compound catabolic process | GO:0072523 | 411 | 0.013 | |
| response to organonitrogen compound | GO:0010243 | 156 | 0.013 | |
| vasculature development | GO:0001944 | 181 | 0.013 | |
| negative regulation of protein modification process | GO:0031400 | 200 | 0.013 | |
| positive regulation of cytoplasmic transport | GO:1903651 | 82 | 0.013 | |
| meiotic cell cycle | GO:0051321 | 13 | 0.013 | |
| neural tube formation | GO:0001841 | 3 | 0.013 | |
| regulation of neuron apoptotic process | GO:0043523 | 35 | 0.012 | Fly |
| regulation of nuclear division | GO:0051783 | 65 | 0.012 | |
| regulation of protein kinase b signaling | GO:0051896 | 61 | 0.012 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 206 | 0.012 | |
| phosphatidylcholine metabolic process | GO:0046470 | 19 | 0.012 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 211 | 0.012 | |
| regulation of defense response | GO:0031347 | 154 | 0.012 | |
| monocarboxylic acid metabolic process | GO:0032787 | 185 | 0.012 | |
| protein desumoylation | GO:0016926 | 4 | 0.012 | |
| positive regulation of cell differentiation | GO:0045597 | 211 | 0.012 | |
| response to wounding | GO:0009611 | 168 | 0.011 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 61 | 0.011 | |
| cellular response to lipid | GO:0071396 | 127 | 0.011 | |
| regulation of cellular response to stress | GO:0080135 | 244 | 0.011 | |
| positive regulation of response to external stimulus | GO:0032103 | 88 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 376 | 0.011 | |
| golgi vesicle transport | GO:0048193 | 80 | 0.011 | |
| negative regulation of cell proliferation | GO:0008285 | 228 | 0.011 | |
| protein processing | GO:0016485 | 226 | 0.011 | |
| regulation of cellular component movement | GO:0051270 | 334 | 0.011 | |
| negative regulation of hydrolase activity | GO:0051346 | 182 | 0.011 | |
| single organism cell adhesion | GO:0098602 | 179 | 0.011 | |
| protein targeting to membrane | GO:0006612 | 42 | 0.011 | |
| phagocytosis | GO:0006909 | 42 | 0.011 | |
| muscle structure development | GO:0061061 | 98 | 0.011 | Fly |
| posttranscriptional gene silencing by rna | GO:0035194 | 25 | 0.010 | |
| negative regulation of peptidase activity | GO:0010466 | 91 | 0.010 | |
| mitochondrion organization | GO:0007005 | 156 | 0.010 | |
| cellular protein complex assembly | GO:0043623 | 188 | 0.010 | |
| cell projection morphogenesis | GO:0048858 | 129 | 0.010 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 412 | 0.010 | |
| regulation of cell morphogenesis | GO:0022604 | 153 | 0.010 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 284 | 0.010 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 156 | 0.010 | |
| chordate embryonic development | GO:0043009 | 34 | 0.010 | |
| phospholipid biosynthetic process | GO:0008654 | 44 | 0.010 | |
