| mrna processing | GO:0006397 | 133 | 0.911 | |
| mrna metabolic process | GO:0016071 | 175 | 0.836 | |
| rna processing | GO:0006396 | 255 | 0.668 | |
| rna splicing via transesterification reactions | GO:0000375 | 90 | 0.514 | |
| oogenesis | GO:0048477 | 2 | 0.496 | |
| rna splicing | GO:0008380 | 131 | 0.460 | |
| embryo development | GO:0009790 | 123 | 0.447 | Worm |
| rna stabilization | GO:0043489 | 18 | 0.386 | |
| regulation of meiotic cell cycle | GO:0051445 | 4 | 0.323 | |
| female gamete generation | GO:0007292 | 2 | 0.266 | |
| regulation of cell cycle process | GO:0010564 | 266 | 0.264 | Fly |
| mrna splicing via spliceosome | GO:0000398 | 89 | 0.245 | |
| epithelium development | GO:0060429 | 227 | 0.241 | |
| post embryonic development | GO:0009791 | 2 | 0.240 | Worm |
| regulation of mrna metabolic process | GO:1903311 | 53 | 0.237 | |
| cell development | GO:0048468 | 328 | 0.237 | |
| oocyte differentiation | GO:0009994 | 2 | 0.236 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.236 | |
| regulation of cell cycle | GO:0051726 | 393 | 0.233 | Fly |
| spliceosomal complex assembly | GO:0000245 | 17 | 0.220 | Human |
| anterior posterior axis specification | GO:0009948 | 2 | 0.186 | |
| regulation of meiosis | GO:0040020 | 3 | 0.165 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 89 | 0.140 | |
| tripartite regional subdivision | GO:0007351 | 2 | 0.136 | |
| negative regulation of mrna metabolic process | GO:1903312 | 15 | 0.134 | |
| mrna catabolic process | GO:0006402 | 56 | 0.124 | Yeast |
| rna catabolic process | GO:0006401 | 71 | 0.123 | Yeast |
| positive regulation of cellular component organization | GO:0051130 | 376 | 0.120 | |
| neuromuscular junction development | GO:0007528 | 3 | 0.112 | |
| cytoplasmic transport | GO:0016482 | 379 | 0.111 | Yeast |
| regulation of mrna processing | GO:0050684 | 48 | 0.110 | |
| regulation of binding | GO:0051098 | 111 | 0.099 | |
| negative regulation of cellular component organization | GO:0051129 | 235 | 0.099 | Yeast |
| multicellular organismal aging | GO:0010259 | 3 | 0.097 | |
| dna recombination | GO:0006310 | 77 | 0.096 | |
| growth | GO:0040007 | 202 | 0.092 | |
| response to cytokine | GO:0034097 | 232 | 0.091 | |
| locomotory behavior | GO:0007626 | 1 | 0.089 | |
| regulation of cellular amine metabolic process | GO:0033238 | 11 | 0.088 | |
| ras protein signal transduction | GO:0007265 | 73 | 0.087 | |
| mitotic cell cycle process | GO:1903047 | 286 | 0.086 | Fly |
| osteoblast differentiation | GO:0001649 | 92 | 0.086 | |
| cellular ketone metabolic process | GO:0042180 | 80 | 0.081 | |
| oocyte development | GO:0048599 | 1 | 0.081 | |
| cellular hyperosmotic response | GO:0071474 | 4 | 0.080 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 213 | 0.076 | Yeast |
| anterior posterior axis specification embryo | GO:0008595 | 2 | 0.074 | |
| translation | GO:0006412 | 132 | 0.074 | Yeast |
| small gtpase mediated signal transduction | GO:0007264 | 78 | 0.073 | |
| negative regulation of developmental process | GO:0051093 | 247 | 0.071 | |
| segmentation | GO:0035282 | 4 | 0.069 | |
| cellular component morphogenesis | GO:0032989 | 314 | 0.068 | |
| mrna 3 end processing | GO:0031124 | 24 | 0.067 | |
| regulation of growth | GO:0040008 | 165 | 0.067 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 281 | 0.067 | Yeast |
| negative regulation of cell differentiation | GO:0045596 | 171 | 0.066 | |
| membrane organization | GO:0061024 | 292 | 0.064 | |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.061 | Human |
| cell division | GO:0051301 | 168 | 0.058 | |
| positive regulation of developmental process | GO:0051094 | 314 | 0.057 | |
| protein targeting | GO:0006605 | 187 | 0.056 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.051 | |
| regulation of nucleotide metabolic process | GO:0006140 | 269 | 0.050 | |
| purine nucleotide catabolic process | GO:0006195 | 405 | 0.048 | |
| amine metabolic process | GO:0009308 | 44 | 0.047 | |
| multi organism reproductive process | GO:0044703 | 54 | 0.045 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 22 | 0.044 | |
| endocytosis | GO:0006897 | 159 | 0.044 | Worm |
| blastoderm segmentation | GO:0007350 | 2 | 0.043 | |
| regulation of response to wounding | GO:1903034 | 101 | 0.042 | |
| positive regulation of cell death | GO:0010942 | 263 | 0.042 | |
| covalent chromatin modification | GO:0016569 | 254 | 0.041 | |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 11 | 0.041 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 284 | 0.041 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 27 | 0.039 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 264 | 0.039 | |
| positive regulation of organelle organization | GO:0010638 | 195 | 0.039 | |
| developmental growth | GO:0048589 | 48 | 0.038 | |
| positive regulation of growth | GO:0045927 | 58 | 0.038 | |
| regulation of nucleoside metabolic process | GO:0009118 | 209 | 0.038 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 183 | 0.038 | |
| histone modification | GO:0016570 | 251 | 0.037 | |
| regulation of cell differentiation | GO:0045595 | 393 | 0.037 | |
| negative regulation of hydrolase activity | GO:0051346 | 182 | 0.037 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 207 | 0.036 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 34 | 0.036 | Worm |
| generation of precursor metabolites and energy | GO:0006091 | 68 | 0.036 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 97 | 0.036 | |
| negative regulation of multi organism process | GO:0043901 | 92 | 0.035 | |
| gonad development | GO:0008406 | 34 | 0.034 | Worm |
| tissue morphogenesis | GO:0048729 | 96 | 0.033 | |
| regulation of rna splicing | GO:0043484 | 62 | 0.033 | |
| organelle fission | GO:0048285 | 149 | 0.032 | |
| determination of adult lifespan | GO:0008340 | 2 | 0.032 | |
| cellular amine metabolic process | GO:0044106 | 41 | 0.031 | |
| ossification | GO:0001503 | 121 | 0.031 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 6 | 0.031 | |
| adult locomotory behavior | GO:0008344 | 1 | 0.030 | |
| regulation of myeloid cell differentiation | GO:0045637 | 81 | 0.030 | |
| carbohydrate metabolic process | GO:0005975 | 207 | 0.030 | |
| response to hormone | GO:0009725 | 175 | 0.030 | |
| mrna stabilization | GO:0048255 | 18 | 0.030 | |
| nuclear migration | GO:0007097 | 1 | 0.029 | |
| single organism carbohydrate metabolic process | GO:0044723 | 193 | 0.029 | |
| defense response | GO:0006952 | 315 | 0.028 | |
| regulation of transmembrane transport | GO:0034762 | 139 | 0.028 | |
| pattern specification process | GO:0007389 | 43 | 0.028 | |
| positive regulation of cellular catabolic process | GO:0031331 | 284 | 0.028 | |
| single organism membrane organization | GO:0044802 | 268 | 0.027 | |
| multicellular organismal reproductive process | GO:0048609 | 40 | 0.026 | |
| positive regulation of translation | GO:0045727 | 35 | 0.026 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 48 | 0.026 | Yeast |
| multi organism cellular process | GO:0044764 | 156 | 0.026 | |
| single organism cellular localization | GO:1902580 | 332 | 0.026 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 3 | 0.025 | |
| inorganic cation transmembrane transport | GO:0098662 | 194 | 0.025 | |
| neurogenesis | GO:0022008 | 169 | 0.025 | Fly |
| behavior | GO:0007610 | 112 | 0.025 | |
| regulation of dna binding | GO:0051101 | 37 | 0.025 | |
| intracellular protein transport | GO:0006886 | 270 | 0.025 | |
| sexual reproduction | GO:0019953 | 37 | 0.025 | |
| reproductive process | GO:0022414 | 106 | 0.025 | Worm |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 303 | 0.024 | |
| protein localization to organelle | GO:0033365 | 280 | 0.024 | |
| negative regulation of necrotic cell death | GO:0060547 | 3 | 0.024 | |
| regulation of cell division | GO:0051302 | 116 | 0.023 | |
| regionalization | GO:0003002 | 29 | 0.023 | |
| developmental process involved in reproduction | GO:0003006 | 66 | 0.023 | Worm |
| cellular lipid metabolic process | GO:0044255 | 303 | 0.023 | |
| sensory perception | GO:0007600 | 103 | 0.023 | |
| endomembrane system organization | GO:0010256 | 196 | 0.023 | |
| cell adhesion | GO:0007155 | 325 | 0.023 | |
| tube development | GO:0035295 | 125 | 0.023 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 200 | 0.023 | |
| positive regulation of cell proliferation | GO:0008284 | 301 | 0.022 | |
| purine ribonucleoside catabolic process | GO:0046130 | 398 | 0.022 | |
| establishment of nucleus localization | GO:0040023 | 1 | 0.022 | |
| multicellular organism reproduction | GO:0032504 | 42 | 0.022 | |
| negative regulation of protein metabolic process | GO:0051248 | 391 | 0.021 | Yeast |
| negative regulation of catalytic activity | GO:0043086 | 335 | 0.021 | |
| response to oxygen containing compound | GO:1901700 | 369 | 0.021 | |
| small molecule biosynthetic process | GO:0044283 | 157 | 0.021 | |
| sensory perception of pain | GO:0019233 | 4 | 0.021 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 7 | 0.020 | |
| unsaturated fatty acid biosynthetic process | GO:0006636 | 21 | 0.020 | |
| chordate embryonic development | GO:0043009 | 34 | 0.020 | |
| cellular cation homeostasis | GO:0030003 | 163 | 0.020 | |
| carboxylic acid biosynthetic process | GO:0046394 | 97 | 0.020 | |
| negative regulation of dna binding | GO:0043392 | 18 | 0.020 | |
| dephosphorylation | GO:0016311 | 209 | 0.020 | |
| reproductive structure development | GO:0048608 | 55 | 0.019 | Worm |
| spermatid development | GO:0007286 | 4 | 0.019 | |
| neurological system process | GO:0050877 | 163 | 0.019 | |
| engulfment of apoptotic cell | GO:0043652 | 2 | 0.019 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 50 | 0.019 | |
| regulation of translation | GO:0006417 | 89 | 0.019 | Yeast |
| ribonucleoprotein complex assembly | GO:0022618 | 78 | 0.019 | Human |
| positive regulation of nucleotide metabolic process | GO:0045981 | 230 | 0.019 | |
| positive regulation of programmed cell death | GO:0043068 | 249 | 0.019 | |
| positive regulation of immune system process | GO:0002684 | 283 | 0.019 | |
| regulation of multi organism process | GO:0043900 | 157 | 0.019 | |
| photoreceptor cell differentiation | GO:0046530 | 2 | 0.019 | |
| cellular response to oxygen containing compound | GO:1901701 | 276 | 0.018 | |
| maintenance of location | GO:0051235 | 112 | 0.018 | |
| nitrogen compound transport | GO:0071705 | 191 | 0.018 | Yeast |
| regulation of purine nucleotide catabolic process | GO:0033121 | 205 | 0.018 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 267 | 0.018 | |
| positive regulation of hydrolase activity | GO:0051345 | 331 | 0.018 | |
| negative regulation of mrna processing | GO:0050686 | 12 | 0.018 | |
| neuron differentiation | GO:0030182 | 138 | 0.018 | |
| single organism reproductive process | GO:0044702 | 98 | 0.018 | Worm |
| nuclear transport | GO:0051169 | 179 | 0.017 | Yeast |
| protein dephosphorylation | GO:0006470 | 81 | 0.017 | |
| biological adhesion | GO:0022610 | 331 | 0.017 | |
| regulation of rna stability | GO:0043487 | 23 | 0.017 | |
| negative regulation of catabolic process | GO:0009895 | 104 | 0.017 | |
| immune effector process | GO:0002252 | 159 | 0.017 | |
| i kappab kinase nf kappab signaling | GO:0007249 | 166 | 0.016 | |
| positive regulation of phosphorylation | GO:0042327 | 394 | 0.016 | |
| regulation of response to dna damage stimulus | GO:2001020 | 94 | 0.016 | |
| nuclear division | GO:0000280 | 128 | 0.016 | |
| regulation of locomotion | GO:0040012 | 329 | 0.016 | |
| axis specification | GO:0009798 | 12 | 0.016 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 227 | 0.016 | |
| single fertilization | GO:0007338 | 11 | 0.016 | |
| fertilization | GO:0009566 | 12 | 0.016 | |
| cell projection organization | GO:0030030 | 252 | 0.015 | |
| negative regulation of binding | GO:0051100 | 57 | 0.015 | |
| negative regulation of apoptotic process | GO:0043066 | 316 | 0.015 | |
| positive regulation of transport | GO:0051050 | 336 | 0.015 | |
| regulation of lymphocyte activation | GO:0051249 | 103 | 0.015 | |
| glycoprotein metabolic process | GO:0009100 | 110 | 0.015 | |
| cellular response to dna damage stimulus | GO:0006974 | 379 | 0.015 | Fly |
| organ morphogenesis | GO:0009887 | 147 | 0.014 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 353 | 0.014 | Yeast |
| atp metabolic process | GO:0046034 | 176 | 0.014 | |
| cell cycle arrest | GO:0007050 | 71 | 0.014 | |
| regulation of nuclear division | GO:0051783 | 65 | 0.014 | |
| cellular amino acid metabolic process | GO:0006520 | 116 | 0.014 | |
| nucleus localization | GO:0051647 | 1 | 0.014 | |
| regulation of cellular component biogenesis | GO:0044087 | 281 | 0.014 | |
| mitotic cell cycle | GO:0000278 | 326 | 0.014 | Fly |
| organelle localization | GO:0051640 | 84 | 0.014 | |
| cell morphogenesis | GO:0000902 | 296 | 0.014 | |
| positive regulation of apoptotic process | GO:0043065 | 246 | 0.014 | |
| inorganic ion transmembrane transport | GO:0098660 | 231 | 0.013 | |
| nervous system development | GO:0007399 | 293 | 0.013 | Fly |
| protein complex localization | GO:0031503 | 31 | 0.013 | |
| cation transport | GO:0006812 | 331 | 0.013 | |
| organic acid biosynthetic process | GO:0016053 | 97 | 0.013 | |
| cellular response to cytokine stimulus | GO:0071345 | 181 | 0.013 | |
| fatty acid metabolic process | GO:0006631 | 115 | 0.013 | |
| taxis | GO:0042330 | 157 | 0.013 | |
| termination of rna polymerase ii transcription | GO:0006369 | 1 | 0.013 | Yeast |
| spermatid differentiation | GO:0048515 | 4 | 0.013 | |
| ion transmembrane transport | GO:0034220 | 338 | 0.013 | |
| regulation of ion transport | GO:0043269 | 189 | 0.013 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 412 | 0.013 | |
| cellular homeostasis | GO:0019725 | 196 | 0.013 | |
| mapk cascade | GO:0000165 | 288 | 0.013 | |
| regulation of developmental growth | GO:0048638 | 30 | 0.013 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 411 | 0.012 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 412 | 0.012 | |
| detection of stimulus | GO:0051606 | 85 | 0.012 | |
| epithelial cell differentiation | GO:0030855 | 141 | 0.012 | |
| muscle contraction | GO:0006936 | 73 | 0.012 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.012 | |
| nucleotide biosynthetic process | GO:0009165 | 109 | 0.012 | |
| ameboidal type cell migration | GO:0001667 | 135 | 0.012 | |
| dna repair | GO:0006281 | 198 | 0.012 | |
| aging | GO:0007568 | 66 | 0.012 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 267 | 0.012 | |
| reproduction | GO:0000003 | 63 | 0.012 | Worm |
| nucleotide catabolic process | GO:0009166 | 408 | 0.012 | |
| protein n linked glycosylation | GO:0006487 | 23 | 0.012 | |
| protein localization to nucleus | GO:0034504 | 136 | 0.012 | |
| cellular response to oxidative stress | GO:0034599 | 85 | 0.012 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 116 | 0.012 | Human |
| meiotic chromosome segregation | GO:0045132 | 4 | 0.012 | |
| regulation of mitochondrion organization | GO:0010821 | 54 | 0.012 | |
| regulation of response to osmotic stress | GO:0047484 | 3 | 0.012 | |
| positive regulation of cell differentiation | GO:0045597 | 211 | 0.011 | |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 23 | 0.011 | |
| cytokinesis | GO:0000910 | 96 | 0.011 | |
| transmembrane transport | GO:0055085 | 399 | 0.011 | |
| prostanoid metabolic process | GO:0006692 | 17 | 0.011 | |
| embryonic morphogenesis | GO:0048598 | 85 | 0.011 | |
| development of primary sexual characteristics | GO:0045137 | 35 | 0.011 | Worm |
| cellular metal ion homeostasis | GO:0006875 | 146 | 0.011 | |
| regulation of cell motility | GO:2000145 | 299 | 0.011 | |
| negative regulation of rna splicing | GO:0033119 | 15 | 0.011 | |
| cellular divalent inorganic cation homeostasis | GO:0072503 | 128 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 176 | 0.011 | Yeast |
| regulation of ras protein signal transduction | GO:0046578 | 155 | 0.011 | |
| purine containing compound catabolic process | GO:0072523 | 411 | 0.011 | |
| establishment of rna localization | GO:0051236 | 39 | 0.011 | Yeast |
| mrna cis splicing via spliceosome | GO:0045292 | 7 | 0.011 | Human |
| nucleoside triphosphate metabolic process | GO:0009141 | 422 | 0.011 | |
| cellular response to organic cyclic compound | GO:0071407 | 127 | 0.011 | |
| nuclear export | GO:0051168 | 69 | 0.011 | Yeast |
| response to other organism | GO:0051707 | 261 | 0.011 | |
| regulation of endopeptidase activity | GO:0052548 | 170 | 0.011 | |
| regulation of mitotic cell cycle | GO:0007346 | 189 | 0.011 | Fly |
| regulation of intracellular transport | GO:0032386 | 195 | 0.011 | |
| nucleobase containing compound transport | GO:0015931 | 51 | 0.011 | Yeast |
| regulation of transporter activity | GO:0032409 | 82 | 0.011 | |
| positive regulation of lipid metabolic process | GO:0045834 | 50 | 0.010 | |
| regulation of mitochondrial membrane permeability involved in apoptotic process | GO:1902108 | 18 | 0.010 | |
| cardiovascular system development | GO:0072358 | 262 | 0.010 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.010 | Worm |
| regulation of cell cycle phase transition | GO:1901987 | 126 | 0.010 | Fly |
| positive regulation of nucleoside metabolic process | GO:0045979 | 186 | 0.010 | |
| anterior posterior pattern specification | GO:0009952 | 9 | 0.010 | |
| regulation of cytoplasmic transport | GO:1903649 | 149 | 0.010 | |
| positive regulation of immune response | GO:0050778 | 159 | 0.010 | |
