| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 1.000 | |
| mrna splicing via spliceosome | GO:0000398 | 89 | 1.000 | |
| regulation of rna splicing | GO:0043484 | 62 | 1.000 | |
| rna splicing via transesterification reactions | GO:0000375 | 90 | 1.000 | |
| regulation of mrna processing | GO:0050684 | 48 | 1.000 | |
| mrna metabolic process | GO:0016071 | 175 | 1.000 | |
| rna splicing | GO:0008380 | 131 | 1.000 | |
| rna processing | GO:0006396 | 255 | 1.000 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 22 | 1.000 | Fly |
| regulation of mrna metabolic process | GO:1903311 | 53 | 0.999 | |
| mrna processing | GO:0006397 | 133 | 0.998 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 27 | 0.993 | Fly |
| rna stabilization | GO:0043489 | 18 | 0.991 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 116 | 0.989 | |
| regulation of meiotic cell cycle | GO:0051445 | 4 | 0.985 | Worm |
| negative regulation of rna splicing | GO:0033119 | 15 | 0.974 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 81 | 0.952 | |
| oogenesis | GO:0048477 | 2 | 0.951 | |
| regulation of cell cycle | GO:0051726 | 393 | 0.928 | Worm |
| negative regulation of mrna metabolic process | GO:1903312 | 15 | 0.879 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 89 | 0.837 | |
| ribonucleoprotein complex assembly | GO:0022618 | 78 | 0.837 | |
| positive regulation of nucleobase containing compound transport | GO:0032241 | 1 | 0.774 | Fly |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 11 | 0.764 | |
| female gamete generation | GO:0007292 | 2 | 0.757 | |
| spliceosomal complex assembly | GO:0000245 | 17 | 0.736 | |
| positive regulation of developmental process | GO:0051094 | 314 | 0.724 | |
| mrna splice site selection | GO:0006376 | 7 | 0.614 | |
| regulation of cell differentiation | GO:0045595 | 393 | 0.599 | |
| meiotic nuclear division | GO:0007126 | 10 | 0.599 | Worm |
| posttranscriptional regulation of gene expression | GO:0010608 | 213 | 0.513 | |
| negative regulation of mrna processing | GO:0050686 | 12 | 0.496 | |
| ncrna metabolic process | GO:0034660 | 108 | 0.465 | |
| positive regulation of programmed cell death | GO:0043068 | 249 | 0.463 | |
| positive regulation of cell differentiation | GO:0045597 | 211 | 0.399 | |
| cellular response to dna damage stimulus | GO:0006974 | 379 | 0.398 | |
| positive regulation of cell death | GO:0010942 | 263 | 0.391 | |
| mrna stabilization | GO:0048255 | 18 | 0.359 | |
| lipid metabolic process | GO:0006629 | 381 | 0.354 | |
| regulation of cell division | GO:0051302 | 116 | 0.350 | Worm |
| nuclear transcribed mrna catabolic process | GO:0000956 | 48 | 0.342 | |
| meiotic cell cycle | GO:0051321 | 13 | 0.337 | Worm |
| behavior | GO:0007610 | 112 | 0.325 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 353 | 0.312 | |
| regulation of cell cycle process | GO:0010564 | 266 | 0.296 | Worm |
| positive regulation of apoptotic process | GO:0043065 | 246 | 0.291 | |
| rna catabolic process | GO:0006401 | 71 | 0.281 | |
| lipid biosynthetic process | GO:0008610 | 177 | 0.261 | |
| reproductive process | GO:0022414 | 106 | 0.259 | Worm |
| cellular macromolecule catabolic process | GO:0044265 | 380 | 0.235 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.226 | |
| cell development | GO:0048468 | 328 | 0.226 | Worm |
| regulation of meiosis | GO:0040020 | 3 | 0.214 | Worm |
| multicellular organism reproduction | GO:0032504 | 42 | 0.202 | Worm |
| cell fate determination | GO:0001709 | 3 | 0.202 | |
| developmental process involved in reproduction | GO:0003006 | 66 | 0.195 | Worm |
| plasma lipoprotein particle clearance | GO:0034381 | 16 | 0.193 | |
| nucleocytoplasmic transport | GO:0006913 | 176 | 0.174 | Fly |
| regulation of nuclear division | GO:0051783 | 65 | 0.159 | Worm |
| positive regulation of gliogenesis | GO:0014015 | 4 | 0.156 | |
| cell division | GO:0051301 | 168 | 0.155 | Worm |
| regulation of astrocyte differentiation | GO:0048710 | 3 | 0.145 | |
| positive regulation of intracellular transport | GO:0032388 | 104 | 0.141 | Fly |
| cellular macromolecular complex assembly | GO:0034622 | 324 | 0.140 | |
| muscle structure development | GO:0061061 | 98 | 0.139 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 281 | 0.131 | |
| gonad development | GO:0008406 | 34 | 0.129 | Worm |
| hemidesmosome assembly | GO:0031581 | 5 | 0.124 | |
| mitotic cell cycle process | GO:1903047 | 286 | 0.117 | Fly |
| sex determination | GO:0007530 | 3 | 0.114 | Worm |
| spermatid development | GO:0007286 | 4 | 0.108 | |
| regulation of rna stability | GO:0043487 | 23 | 0.107 | |
| embryo development | GO:0009790 | 123 | 0.106 | Worm |
| developmental growth | GO:0048589 | 48 | 0.103 | Worm |
| growth | GO:0040007 | 202 | 0.101 | Worm |
| neuron differentiation | GO:0030182 | 138 | 0.093 | |
| cellular process involved in reproduction in multicellular organism | GO:0022412 | 15 | 0.088 | Worm |
| negative regulation of translation | GO:0017148 | 37 | 0.086 | |
| cell junction organization | GO:0034330 | 79 | 0.081 | |
| regulation of actin filament based process | GO:0032970 | 141 | 0.081 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 25 | 0.080 | |
| canonical wnt signaling pathway involved in heart development | GO:0061316 | 3 | 0.080 | |
| regulation of smooth muscle cell apoptotic process | GO:0034391 | 6 | 0.079 | |
| response to external biotic stimulus | GO:0043207 | 261 | 0.078 | |
| gene silencing by mirna | GO:0035195 | 23 | 0.076 | |
| circulatory system development | GO:0072359 | 262 | 0.076 | |
| negative regulation of cell fate commitment | GO:0010454 | 3 | 0.075 | |
| mrna 3 end processing | GO:0031124 | 24 | 0.075 | |
| regulation of signal transduction by p53 class mediator | GO:1901796 | 26 | 0.075 | |
| hindbrain development | GO:0030902 | 3 | 0.073 | |
| epidermis development | GO:0008544 | 59 | 0.070 | |
| double strand break repair | GO:0006302 | 101 | 0.069 | |
| regulation of translation | GO:0006417 | 89 | 0.067 | |
| taxis | GO:0042330 | 157 | 0.067 | |
| ribonucleoprotein complex disassembly | GO:0032988 | 7 | 0.064 | |
| positive regulation of nucleocytoplasmic transport | GO:0046824 | 54 | 0.063 | Fly |
| ion homeostasis | GO:0050801 | 230 | 0.063 | |
| positive regulation of cell activation | GO:0050867 | 81 | 0.062 | |
| signal transduction involved in dna integrity checkpoint | GO:0072401 | 15 | 0.061 | |
| single organism reproductive process | GO:0044702 | 98 | 0.061 | Worm |
| divalent inorganic cation homeostasis | GO:0072507 | 136 | 0.058 | |
| nervous system development | GO:0007399 | 293 | 0.058 | Fly |
| central nervous system development | GO:0007417 | 123 | 0.057 | |
| protein oligomerization | GO:0051259 | 173 | 0.057 | |
| regulation of lipid transport by regulation of transcription from rna polymerase ii promoter | GO:0072367 | 4 | 0.056 | |
| cell junction assembly | GO:0034329 | 67 | 0.056 | |
| low density lipoprotein particle clearance | GO:0034383 | 8 | 0.055 | |
| vesicle mediated transport | GO:0016192 | 371 | 0.054 | |
| myoblast fusion | GO:0007520 | 1 | 0.053 | |
| osteoblast differentiation | GO:0001649 | 92 | 0.053 | |
| epithelial cell differentiation | GO:0030855 | 141 | 0.052 | |
| positive regulation of phosphorylation | GO:0042327 | 394 | 0.052 | |
| positive regulation of transport | GO:0051050 | 336 | 0.052 | Fly |
| translation | GO:0006412 | 132 | 0.051 | |
| endodermal cell fate specification | GO:0001714 | 4 | 0.050 | |
| myeloid cell differentiation | GO:0030099 | 117 | 0.050 | |
| multicellular organismal reproductive process | GO:0048609 | 40 | 0.048 | Worm |
| somatic muscle development | GO:0007525 | 1 | 0.045 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 34 | 0.045 | Worm |
| cation transport | GO:0006812 | 331 | 0.045 | |
| cell substrate junction assembly | GO:0007044 | 35 | 0.045 | |
| regulation of muscle cell differentiation | GO:0051147 | 31 | 0.043 | |
| mitotic spindle organization | GO:0007052 | 27 | 0.043 | Fly |
| regulation of homeostatic process | GO:0032844 | 121 | 0.041 | |
| spermatid differentiation | GO:0048515 | 4 | 0.040 | |
| chemical homeostasis | GO:0048878 | 306 | 0.040 | |
| chemotaxis | GO:0006935 | 157 | 0.039 | |
| actin filament based process | GO:0030029 | 224 | 0.039 | |
| spindle organization | GO:0007051 | 53 | 0.038 | Fly |
| defense response | GO:0006952 | 315 | 0.037 | |
| blastocyst development | GO:0001824 | 3 | 0.036 | |
| metal ion transport | GO:0030001 | 272 | 0.035 | |
| heart field specification | GO:0003128 | 2 | 0.035 | |
| epithelium development | GO:0060429 | 227 | 0.034 | |
| ossification | GO:0001503 | 121 | 0.033 | |
| protein targeting | GO:0006605 | 187 | 0.033 | |
| tissue homeostasis | GO:0001894 | 63 | 0.033 | |
| cardiovascular system development | GO:0072358 | 262 | 0.033 | |
| regulation of glial cell differentiation | GO:0045685 | 3 | 0.032 | |
| cytosolic calcium ion homeostasis | GO:0051480 | 89 | 0.032 | |
| cellular homeostasis | GO:0019725 | 196 | 0.031 | |
| gamete generation | GO:0007276 | 25 | 0.031 | Worm |
| sex differentiation | GO:0007548 | 45 | 0.030 | Worm |
| retinal ganglion cell axon guidance | GO:0031290 | 2 | 0.030 | |
| regulation of intracellular transport | GO:0032386 | 195 | 0.030 | Fly |
| regulation of nervous system development | GO:0051960 | 88 | 0.029 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 211 | 0.029 | |
| regulation of receptor mediated endocytosis | GO:0048259 | 32 | 0.029 | |
| regulation of mapk cascade | GO:0043408 | 262 | 0.029 | |
| regulation of response to dna damage stimulus | GO:2001020 | 94 | 0.029 | |
| smooth muscle cell apoptotic process | GO:0034390 | 6 | 0.028 | |
| somatic stem cell maintenance | GO:0035019 | 4 | 0.028 | |
| muscle cell fate commitment | GO:0042693 | 4 | 0.028 | |
| proteasomal protein catabolic process | GO:0010498 | 176 | 0.027 | |
| multi multicellular organism process | GO:0044706 | 18 | 0.027 | |
| protein localization to organelle | GO:0033365 | 280 | 0.027 | |
| regulation of cellular response to stress | GO:0080135 | 244 | 0.026 | |
| regulation of gene expression epigenetic | GO:0040029 | 73 | 0.026 | |
| establishment or maintenance of bipolar cell polarity | GO:0061245 | 2 | 0.025 | |
| posttranscriptional gene silencing | GO:0016441 | 25 | 0.025 | |
| sexual reproduction | GO:0019953 | 37 | 0.025 | Worm |
| microtubule based process | GO:0007017 | 210 | 0.025 | Fly |
| mapk cascade | GO:0000165 | 288 | 0.025 | |
| neuromuscular junction development | GO:0007528 | 3 | 0.024 | |
| signal transduction by phosphorylation | GO:0023014 | 297 | 0.024 | |
| ncrna processing | GO:0034470 | 83 | 0.024 | |
| regulation of leukocyte activation | GO:0002694 | 115 | 0.024 | |
| regulation of definitive erythrocyte differentiation | GO:0010724 | 2 | 0.023 | |
| genitalia development | GO:0048806 | 10 | 0.023 | Worm |
| neurogenesis | GO:0022008 | 169 | 0.023 | Fly |
| protein import | GO:0017038 | 130 | 0.023 | |
| dna repair | GO:0006281 | 198 | 0.023 | |
| mrna catabolic process | GO:0006402 | 56 | 0.023 | |
| positive regulation of mapk cascade | GO:0043410 | 190 | 0.023 | |
| syncytium formation by plasma membrane fusion | GO:0000768 | 2 | 0.023 | |
| notch signaling pathway | GO:0007219 | 31 | 0.022 | |
| positive regulation of nervous system development | GO:0051962 | 54 | 0.022 | |
| regulation of cytoskeleton organization | GO:0051493 | 177 | 0.021 | |
| aging | GO:0007568 | 66 | 0.021 | |
| positive regulation of neurogenesis | GO:0050769 | 49 | 0.021 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 4 | 0.020 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 102 | 0.020 | |
| positive regulation of astrocyte differentiation | GO:0048711 | 2 | 0.020 | |
| intracellular steroid hormone receptor signaling pathway | GO:0030518 | 61 | 0.020 | |
| dna integrity checkpoint | GO:0031570 | 71 | 0.020 | |
| rhythmic behavior | GO:0007622 | 2 | 0.020 | |
| generation of neurons | GO:0048699 | 152 | 0.020 | |
| regulation of protein transport | GO:0051223 | 213 | 0.020 | |
| erk1 and erk2 cascade | GO:0070371 | 104 | 0.019 | |
| reproduction | GO:0000003 | 63 | 0.019 | Worm |
| vasculature development | GO:0001944 | 181 | 0.019 | |
| endodermal cell fate commitment | GO:0001711 | 4 | 0.019 | |
| cation homeostasis | GO:0055080 | 189 | 0.019 | |
| response to light stimulus | GO:0009416 | 87 | 0.018 | |
| nuclear division | GO:0000280 | 128 | 0.018 | Worm |
| response to nitrogen compound | GO:1901698 | 184 | 0.018 | |
| cell projection morphogenesis | GO:0048858 | 129 | 0.018 | |
| signal transduction involved in dna damage checkpoint | GO:0072422 | 15 | 0.018 | |
| response to biotic stimulus | GO:0009607 | 276 | 0.018 | |
| positive regulation of cytosolic calcium ion concentration | GO:0007204 | 82 | 0.017 | |
| regulation of cell development | GO:0060284 | 161 | 0.017 | |
| muscle system process | GO:0003012 | 81 | 0.017 | |
| chordate embryonic development | GO:0043009 | 34 | 0.017 | |
| negative regulation of multicellular organismal process | GO:0051241 | 317 | 0.017 | |
| primary neural tube formation | GO:0014020 | 3 | 0.017 | |
| regulation of lipid biosynthetic process | GO:0046890 | 47 | 0.017 | |
| multi organism cellular process | GO:0044764 | 156 | 0.017 | |
| cellular ion homeostasis | GO:0006873 | 168 | 0.016 | |
| negative regulation of catalytic activity | GO:0043086 | 335 | 0.016 | |
| response to abiotic stimulus | GO:0009628 | 336 | 0.016 | |
| positive regulation of rna export from nucleus | GO:0046833 | 1 | 0.015 | Fly |
| receptor mediated endocytosis | GO:0006898 | 84 | 0.015 | |
| negative regulation of cell cycle process | GO:0010948 | 121 | 0.015 | |
| nitrogen compound transport | GO:0071705 | 191 | 0.015 | Fly |
| signal transduction by p53 class mediator | GO:0072331 | 72 | 0.015 | |
| rna interference | GO:0016246 | 4 | 0.015 | |
| cardiac muscle cell contraction | GO:0086003 | 4 | 0.014 | |
| oocyte development | GO:0048599 | 1 | 0.014 | |
| cerebellum development | GO:0021549 | 2 | 0.014 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 284 | 0.014 | |
| system process | GO:0003008 | 349 | 0.014 | |
| response to uv | GO:0009411 | 73 | 0.014 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 267 | 0.014 | |
| cell type specific apoptotic process | GO:0097285 | 125 | 0.014 | |
| myeloid cell homeostasis | GO:0002262 | 34 | 0.014 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.014 | |
| cellular cation homeostasis | GO:0030003 | 163 | 0.014 | |
| negative regulation of sequence specific dna binding transcription factor activity | GO:0043433 | 89 | 0.014 | |
| regulation of cell activation | GO:0050865 | 125 | 0.014 | |
| dna damage checkpoint | GO:0000077 | 68 | 0.014 | |
| epithelial cell proliferation involved in lung morphogenesis | GO:0060502 | 3 | 0.013 | |
| non recombinational repair | GO:0000726 | 14 | 0.013 | |
| negative regulation of developmental process | GO:0051093 | 247 | 0.013 | |
| cell part morphogenesis | GO:0032990 | 137 | 0.013 | |
| regulation of neurogenesis | GO:0050767 | 82 | 0.013 | |
| divalent inorganic cation transport | GO:0072511 | 158 | 0.013 | |
| negative regulation of cell fate specification | GO:0009996 | 3 | 0.013 | |
| small gtpase mediated signal transduction | GO:0007264 | 78 | 0.013 | |
| response to oxidative stress | GO:0006979 | 121 | 0.013 | |
| cellular lipid metabolic process | GO:0044255 | 303 | 0.013 | |
| neurological system process | GO:0050877 | 163 | 0.013 | |
| regulation of low density lipoprotein particle receptor biosynthetic process | GO:0045714 | 4 | 0.013 | |
| positive regulation of immune system process | GO:0002684 | 283 | 0.013 | |
| organelle fission | GO:0048285 | 149 | 0.012 | Worm |
| multicellular organismal aging | GO:0010259 | 3 | 0.012 | |
| regulation of skeletal muscle cell differentiation | GO:2001014 | 3 | 0.012 | |
| cell projection organization | GO:0030030 | 252 | 0.012 | |
| metencephalon development | GO:0022037 | 2 | 0.012 | |
| neuron apoptotic process | GO:0051402 | 39 | 0.012 | |
| regulation of cell cycle phase transition | GO:1901987 | 126 | 0.012 | |
| post embryonic development | GO:0009791 | 2 | 0.012 | Worm |
| negative regulation of protein metabolic process | GO:0051248 | 391 | 0.012 | |
| negative regulation of protein complex disassembly | GO:0043242 | 20 | 0.012 | |
| regulation of ion homeostasis | GO:2000021 | 73 | 0.012 | |
| mating | GO:0007618 | 1 | 0.012 | |
| regulation of cell growth | GO:0001558 | 135 | 0.012 | |
| negative regulation of programmed cell death | GO:0043069 | 321 | 0.012 | |
| brain development | GO:0007420 | 97 | 0.012 | |
| dephosphorylation | GO:0016311 | 209 | 0.012 | |
| negative regulation of response to external stimulus | GO:0032102 | 83 | 0.012 | |
| regulation of vesicle mediated transport | GO:0060627 | 130 | 0.012 | |
| establishment of tissue polarity | GO:0007164 | 3 | 0.011 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 50 | 0.011 | |
| positive regulation of cell development | GO:0010720 | 92 | 0.011 | |
| negative regulation of phosphatase activity | GO:0010923 | 61 | 0.011 | |
| regulation of endocytosis | GO:0030100 | 72 | 0.011 | |
| embryonic epithelial tube formation | GO:0001838 | 4 | 0.011 | |
| cellular metal ion homeostasis | GO:0006875 | 146 | 0.011 | |
| inner ear morphogenesis | GO:0042472 | 4 | 0.011 | |
| nuclear import | GO:0051170 | 106 | 0.011 | |
| specification of organ identity | GO:0010092 | 3 | 0.011 | |
| lymphocyte activation | GO:0046649 | 133 | 0.011 | |
| i kappab kinase nf kappab signaling | GO:0007249 | 166 | 0.011 | |
| neural tube formation | GO:0001841 | 3 | 0.011 | |
| positive regulation of protein transport | GO:0051222 | 135 | 0.011 | |
| ras protein signal transduction | GO:0007265 | 73 | 0.011 | |
| negative regulation of fertilization | GO:0060467 | 2 | 0.011 | |
| response to oxygen containing compound | GO:1901700 | 369 | 0.011 | |
| chromosome segregation | GO:0007059 | 114 | 0.011 | |
| positive regulation of t cell activation | GO:0050870 | 54 | 0.011 | |
| regulation of actin cytoskeleton organization | GO:0032956 | 116 | 0.010 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 264 | 0.010 | |
| positive regulation of mrna metabolic process | GO:1903313 | 19 | 0.010 | |
| meiotic chromosome segregation | GO:0045132 | 4 | 0.010 | |
| positive regulation of secretion by cell | GO:1903532 | 108 | 0.010 | |
| response to other organism | GO:0051707 | 261 | 0.010 | |
| actin cytoskeleton organization | GO:0030036 | 207 | 0.010 | |
| immune response | GO:0006955 | 307 | 0.010 | |
| monocarboxylic acid biosynthetic process | GO:0072330 | 67 | 0.010 | |
