| protein neddylation | GO:0045116 | 1 | 0.837 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.205 | |
| male gamete generation | GO:0048232 | 285 | 0.184 | |
| glycosyl compound catabolic process | GO:1901658 | 206 | 0.181 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.164 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.164 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.161 | |
| dna metabolic process | GO:0006259 | 303 | 0.145 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.142 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.141 | |
| dna repair | GO:0006281 | 107 | 0.132 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.132 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.124 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 205 | 0.124 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.116 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.115 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.104 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.096 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.092 | |
| mapk cascade | GO:0000165 | 281 | 0.084 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.079 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.078 | |
| organelle localization | GO:0051640 | 179 | 0.070 | Worm |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.068 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.067 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.067 | |
| chromosome segregation | GO:0007059 | 48 | 0.065 | |
| positive regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032436 | 23 | 0.065 | |
| proteasomal protein catabolic process | GO:0010498 | 98 | 0.064 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.063 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.060 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.058 | |
| nucleoside catabolic process | GO:0009164 | 206 | 0.058 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.058 | |
| trna processing | GO:0008033 | 11 | 0.055 | |
| response to growth factor | GO:0070848 | 198 | 0.055 | |
| cytokinesis | GO:0000910 | 17 | 0.055 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.055 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.054 | |
| microtubule based process | GO:0007017 | 236 | 0.053 | |
| ribonucleoside catabolic process | GO:0042454 | 206 | 0.052 | |
| positive regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045899 | 2 | 0.051 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.049 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.049 | |
| protein depolymerization | GO:0051261 | 34 | 0.049 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.048 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 56 | 0.047 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.047 | |
| cognition | GO:0050890 | 149 | 0.047 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.047 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.047 | |
| glucan catabolic process | GO:0009251 | 5 | 0.046 | |
| chromatin organization | GO:0006325 | 206 | 0.045 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.044 | |
| spermatogenesis | GO:0007283 | 284 | 0.044 | |
| positive regulation of mapk cascade | GO:0043410 | 170 | 0.043 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.043 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.043 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.043 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.043 | |
| spermatid development | GO:0007286 | 108 | 0.041 | |
| regulation of neuron projection development | GO:0010975 | 169 | 0.041 | |
| chromatin modification | GO:0016568 | 187 | 0.040 | |
| amine metabolic process | GO:0009308 | 45 | 0.040 | |
| guanosine containing compound catabolic process | GO:1901069 | 144 | 0.039 | |
| macromolecular complex disassembly | GO:0032984 | 43 | 0.038 | |
| guanosine containing compound metabolic process | GO:1901068 | 144 | 0.038 | |
| protein maturation | GO:0051604 | 176 | 0.038 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.038 | |
| positive regulation of proteolysis involved in cellular protein catabolic process | GO:1903052 | 31 | 0.038 | |
| axoneme assembly | GO:0035082 | 15 | 0.038 | |
| positive regulation of rap gtpase activity | GO:0032854 | 3 | 0.037 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.037 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.036 | |
| lung development | GO:0030324 | 164 | 0.036 | |
| regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045898 | 2 | 0.035 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.035 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.035 | |
| organelle fission | GO:0048285 | 170 | 0.035 | |
| learning or memory | GO:0007611 | 148 | 0.035 | |
| oocyte construction | GO:0007308 | 2 | 0.034 | |
| gtp catabolic process | GO:0006184 | 143 | 0.034 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.032 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.032 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.032 | |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.030 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.030 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.030 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.030 | Worm |
| regulation of transmembrane transport | GO:0034762 | 128 | 0.030 | |
| multi multicellular organism process | GO:0044706 | 109 | 0.030 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.029 | |
| endomembrane system organization | GO:0010256 | 147 | 0.029 | |
| negative regulation of cell motility | GO:2000146 | 61 | 0.029 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.029 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.029 | |
| gtp metabolic process | GO:0046039 | 144 | 0.028 | |
| modification dependent protein catabolic process | GO:0019941 | 133 | 0.028 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.027 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.027 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.026 | |
| response to light stimulus | GO:0009416 | 135 | 0.026 | |
| regulation of vesicle mediated transport | GO:0060627 | 139 | 0.026 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 94 | 0.025 | |
| stem cell development | GO:0048864 | 219 | 0.025 | |
| positive regulation of hydrolase activity | GO:0051345 | 148 | 0.024 | |
| cell division | GO:0051301 | 120 | 0.024 | |
| cellular carbohydrate metabolic process | GO:0044262 | 119 | 0.024 | |
| protein catabolic process | GO:0030163 | 221 | 0.024 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 57 | 0.024 | |
| regionalization | GO:0003002 | 337 | 0.023 | |
| keratinocyte development | GO:0003334 | 10 | 0.023 | |
| stem cell differentiation | GO:0048863 | 268 | 0.023 | |
| meiotic chromosome segregation | GO:0045132 | 19 | 0.023 | |
| peptidyl tyrosine modification | GO:0018212 | 145 | 0.022 | |
| synaptic transmission | GO:0007268 | 329 | 0.022 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.022 | |
| positive regulation of cellular protein catabolic process | GO:1903364 | 34 | 0.022 | |
| positive regulation of neuron projection development | GO:0010976 | 79 | 0.022 | |
| cation transport | GO:0006812 | 399 | 0.022 | |
| positive regulation of cellular catabolic process | GO:0031331 | 148 | 0.022 | |
| positive regulation of cell projection organization | GO:0031346 | 95 | 0.022 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.022 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.022 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.021 | |
| protein complex disassembly | GO:0043241 | 40 | 0.021 | |
| regulation of glycogen catabolic process | GO:0005981 | 2 | 0.021 | |
| carbohydrate biosynthetic process | GO:0016051 | 74 | 0.021 | |
| organelle assembly | GO:0070925 | 177 | 0.021 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.021 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.021 | |
| regulation of stress activated mapk cascade | GO:0032872 | 69 | 0.021 | |
| positive regulation of mitotic cell cycle | GO:0045931 | 41 | 0.020 | |
| regulation of protein kinase activity | GO:0045859 | 232 | 0.020 | |
| positive regulation of cell development | GO:0010720 | 237 | 0.020 | |
| protein dna complex subunit organization | GO:0071824 | 28 | 0.019 | |
| meiotic cell cycle process | GO:1903046 | 77 | 0.019 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 199 | 0.019 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.019 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.019 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 88 | 0.019 | |
| multi organism behavior | GO:0051705 | 62 | 0.018 | |
| memory | GO:0007613 | 58 | 0.018 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.018 | |
| erk1 and erk2 cascade | GO:0070371 | 77 | 0.018 | |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 40 | 0.018 | |
| regulation of transferase activity | GO:0051338 | 263 | 0.018 | |
| respiratory tube development | GO:0030323 | 167 | 0.018 | |
| transmembrane transport | GO:0055085 | 412 | 0.018 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 80 | 0.018 | |
| respiratory system development | GO:0060541 | 190 | 0.018 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.018 | |
| centrosome organization | GO:0051297 | 26 | 0.018 | |
| wnt signaling pathway | GO:0016055 | 188 | 0.017 | |
| stem cell maintenance | GO:0019827 | 130 | 0.017 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.017 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.017 | |
| positive regulation of protein kinase activity | GO:0045860 | 144 | 0.017 | |
| regulation of ras protein signal transduction | GO:0046578 | 114 | 0.017 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.017 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.017 | |
| regulation of translation | GO:0006417 | 71 | 0.016 | |
| dna templated transcription termination | GO:0006353 | 4 | 0.016 | |
| positive regulation of cell cycle process | GO:0090068 | 61 | 0.016 | |
| dendrite development | GO:0016358 | 115 | 0.016 | |
| muscle adaptation | GO:0043500 | 39 | 0.016 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 139 | 0.015 | |
| lipid localization | GO:0010876 | 126 | 0.015 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.015 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 151 | 0.015 | |
| germ cell development | GO:0007281 | 185 | 0.015 | |
| microtubule organizing center organization | GO:0031023 | 28 | 0.015 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.015 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.015 | |
| regulation of neuron differentiation | GO:0045664 | 281 | 0.015 | |
| immunoglobulin transcytosis in epithelial cells | GO:0002414 | 2 | 0.015 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 80 | 0.014 | |
| regulation of glucose metabolic process | GO:0010906 | 60 | 0.014 | |
| protein modification by small protein removal | GO:0070646 | 21 | 0.014 | |
| spermatid differentiation | GO:0048515 | 115 | 0.014 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.014 | |
| rna interference | GO:0016246 | 2 | 0.014 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.014 | |
| endocytosis | GO:0006897 | 168 | 0.014 | |
| cellularization | GO:0007349 | 1 | 0.014 | |
| developmental maturation | GO:0021700 | 193 | 0.014 | |
| positive regulation of hormone secretion | GO:0046887 | 38 | 0.014 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.014 | |
| regulation of long term synaptic potentiation | GO:1900271 | 4 | 0.014 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 114 | 0.014 | |
| regulation of cell motility | GO:2000145 | 236 | 0.013 | |
| glycogen metabolic process | GO:0005977 | 32 | 0.013 | |
| negative regulation of protein complex disassembly | GO:0043242 | 22 | 0.013 | |
| glycogen catabolic process | GO:0005980 | 5 | 0.013 | |
| regulation of cellular protein catabolic process | GO:1903362 | 61 | 0.013 | |
| biological phase | GO:0044848 | 20 | 0.013 | |
| regulation of protein autophosphorylation | GO:0031952 | 8 | 0.013 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.013 | |
| positive regulation of erk1 and erk2 cascade | GO:0070374 | 47 | 0.013 | |
| response to peptide | GO:1901652 | 136 | 0.013 | |
| mitotic cytokinesis | GO:0000281 | 4 | 0.013 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.013 | |
| regulation of ion transmembrane transport | GO:0034765 | 119 | 0.013 | |
| protein localization to organelle | GO:0033365 | 185 | 0.013 | |
| cellular polysaccharide metabolic process | GO:0044264 | 38 | 0.012 | |
| calcium ion transmembrane transport | GO:0070588 | 85 | 0.012 | |
| negative regulation of synapse assembly | GO:0051964 | 3 | 0.012 | |
| translation | GO:0006412 | 93 | 0.012 | |
| circadian regulation of gene expression | GO:0032922 | 48 | 0.012 | |
| peptidyl tyrosine phosphorylation | GO:0018108 | 143 | 0.012 | |
| protein polymerization | GO:0051258 | 57 | 0.012 | |
| regulation of protein maturation | GO:1903317 | 96 | 0.012 | |
| regulation of cell migration | GO:0030334 | 219 | 0.012 | |
| regulation of transporter activity | GO:0032409 | 57 | 0.012 | |
| histone modification | GO:0016570 | 159 | 0.012 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.012 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.012 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.012 | |
| negative regulation of epithelial cell proliferation | GO:0050680 | 64 | 0.012 | |
| regulation of protein complex assembly | GO:0043254 | 83 | 0.012 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.011 | Worm |
| reproductive behavior | GO:0019098 | 32 | 0.011 | |
| nucleus localization | GO:0051647 | 20 | 0.011 | Worm |
| palate development | GO:0060021 | 76 | 0.011 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.011 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.011 | |
| energy reserve metabolic process | GO:0006112 | 39 | 0.011 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.011 | |
| maintenance of location | GO:0051235 | 89 | 0.011 | |
| neurotransmitter transport | GO:0006836 | 76 | 0.011 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.011 | |
| actomyosin structure organization | GO:0031032 | 56 | 0.011 | |
| positive regulation of calcium ion transmembrane transporter activity | GO:1901021 | 8 | 0.011 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.011 | |
| regulation of actin filament based process | GO:0032970 | 99 | 0.011 | |
| regulation of system process | GO:0044057 | 200 | 0.011 | |
| cellular polysaccharide catabolic process | GO:0044247 | 5 | 0.011 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.011 | |
| regulation of secretion | GO:0051046 | 274 | 0.010 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.010 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 4 | 0.010 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.010 | |
| monosaccharide metabolic process | GO:0005996 | 106 | 0.010 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.010 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.010 | |
| regulation of binding | GO:0051098 | 111 | 0.010 | |
| regulation of cellular component size | GO:0032535 | 121 | 0.010 | |
