| retrograde transport endosome to golgi | GO:0042147 | 2 | 0.990 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.179 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.105 | |
| lysosomal transport | GO:0007041 | 10 | 0.080 | |
| negative regulation of intracellular transport | GO:0032387 | 38 | 0.080 | |
| negative regulation of cytoplasmic transport | GO:1903650 | 29 | 0.074 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.071 | |
| membrane lipid biosynthetic process | GO:0046467 | 32 | 0.067 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.066 | |
| endosome to lysosome transport | GO:0008333 | 6 | 0.065 | |
| cation transport | GO:0006812 | 399 | 0.062 | |
| recombinational repair | GO:0000725 | 21 | 0.056 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.056 | |
| protein processing | GO:0016485 | 163 | 0.050 | |
| glycosyl compound catabolic process | GO:1901658 | 206 | 0.049 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.047 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.046 | |
| protein catabolic process | GO:0030163 | 221 | 0.043 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.043 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.041 | |
| dna metabolic process | GO:0006259 | 303 | 0.041 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.040 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.037 | |
| locomotory behavior | GO:0007626 | 195 | 0.036 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.035 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.035 | |
| microtubule based process | GO:0007017 | 236 | 0.035 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.035 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.033 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.032 | |
| intracellular protein transport | GO:0006886 | 204 | 0.032 | |
| organelle assembly | GO:0070925 | 177 | 0.032 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.031 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.030 | |
| amide transport | GO:0042886 | 138 | 0.030 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.030 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.030 | |
| peptide transport | GO:0015833 | 133 | 0.029 | |
| modification dependent protein catabolic process | GO:0019941 | 133 | 0.029 | |
| sphingolipid biosynthetic process | GO:0030148 | 26 | 0.029 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.028 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.027 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.027 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.027 | |
| positive regulation of meiosis i | GO:0060903 | 5 | 0.027 | |
| cellular glucose homeostasis | GO:0001678 | 52 | 0.026 | |
| protein maturation | GO:0051604 | 176 | 0.026 | |
| transmembrane transport | GO:0055085 | 412 | 0.025 | |
| dna recombination | GO:0006310 | 92 | 0.024 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.024 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.023 | |
| double strand break repair via homologous recombination | GO:0000724 | 21 | 0.023 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.022 | |
| regulation of secretion | GO:0051046 | 274 | 0.022 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.022 | |
| negative regulation of synapse assembly | GO:0051964 | 3 | 0.022 | |
| regulation of peptide transport | GO:0090087 | 91 | 0.022 | |
| maintenance of location | GO:0051235 | 89 | 0.021 | |
| regulation of ion transport | GO:0043269 | 215 | 0.021 | |
| cellular chemical homeostasis | GO:0055082 | 215 | 0.021 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.020 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.020 | |
| chromatin organization | GO:0006325 | 206 | 0.020 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.020 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.020 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 56 | 0.019 | |
| ubiquitin dependent protein catabolic process via the multivesicular body sorting pathway | GO:0043162 | 3 | 0.019 | |
| regulation of ion transmembrane transport | GO:0034765 | 119 | 0.019 | |
| regulation of peptidase activity | GO:0052547 | 96 | 0.019 | |
| regulation of protein processing | GO:0070613 | 96 | 0.019 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.019 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.019 | |
| negative regulation of protein processing | GO:0010955 | 79 | 0.018 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.018 | |
| learning or memory | GO:0007611 | 148 | 0.018 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.017 | |
| vacuole organization | GO:0007033 | 38 | 0.017 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.017 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.017 | |
| establishment of melanosome localization | GO:0032401 | 11 | 0.017 | |
| protein ubiquitination | GO:0016567 | 171 | 0.017 | |
| cellular response to glucose stimulus | GO:0071333 | 45 | 0.017 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.017 | |
| membrane organization | GO:0061024 | 245 | 0.017 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.016 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.016 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.016 | |
| cilium morphogenesis | GO:0060271 | 102 | 0.016 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.016 | |
| regulation of transporter activity | GO:0032409 | 57 | 0.016 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.016 | |
| membrane lipid metabolic process | GO:0006643 | 53 | 0.015 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.015 | |
| carbohydrate homeostasis | GO:0033500 | 128 | 0.015 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.015 | |
| response to inorganic substance | GO:0010035 | 96 | 0.015 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.015 | |
| hormone secretion | GO:0046879 | 128 | 0.015 | |
| cellular homeostasis | GO:0019725 | 240 | 0.015 | |
| glucose homeostasis | GO:0042593 | 128 | 0.015 | |
| guanosine containing compound catabolic process | GO:1901069 | 144 | 0.015 | |
| vacuolar transport | GO:0007034 | 11 | 0.014 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.014 | |
| response to monosaccharide | GO:0034284 | 67 | 0.014 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.014 | |
| response to oxidative stress | GO:0006979 | 123 | 0.014 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 88 | 0.014 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.014 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.014 | |
| mapk cascade | GO:0000165 | 281 | 0.014 | |
| cellular response to monosaccharide stimulus | GO:0071326 | 47 | 0.014 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.014 | |
| regulation of peptide secretion | GO:0002791 | 77 | 0.014 | |
| sensory perception | GO:0007600 | 245 | 0.013 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.013 | |
| regulation of cell growth | GO:0001558 | 91 | 0.013 | |
| oxidation reduction process | GO:0055114 | 342 | 0.013 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 58 | 0.013 | |
| cell growth | GO:0016049 | 130 | 0.013 | |
| learning | GO:0007612 | 98 | 0.013 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.013 | |
| cation homeostasis | GO:0055080 | 212 | 0.013 | |
| peptide secretion | GO:0002790 | 114 | 0.013 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 83 | 0.013 | |
| single organism nuclear import | GO:1902593 | 95 | 0.013 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.013 | |
| anterograde axon cargo transport | GO:0008089 | 20 | 0.013 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.012 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.012 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.012 | |
| trivalent inorganic cation transport | GO:0072512 | 5 | 0.012 | |
| response to metal ion | GO:0010038 | 47 | 0.012 | |
| regulation of secretion by cell | GO:1903530 | 249 | 0.012 | |
| exosomal secretion | GO:1990182 | 1 | 0.012 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.012 | |
| cell substrate adhesion | GO:0031589 | 130 | 0.012 | |
| protein neddylation | GO:0045116 | 1 | 0.012 | |
| telencephalon development | GO:0021537 | 186 | 0.012 | |
| regulation of establishment of protein localization | GO:0070201 | 181 | 0.012 | |
| male gamete generation | GO:0048232 | 285 | 0.012 | |
| actin filament organization | GO:0007015 | 113 | 0.012 | |
| proteasome assembly | GO:0043248 | 1 | 0.011 | |
| protein localization to membrane | GO:0072657 | 108 | 0.011 | |
| regulation of protein transport | GO:0051223 | 163 | 0.011 | |
| regulation of cellular component size | GO:0032535 | 121 | 0.011 | |
| positive regulation of protein kinase activity | GO:0045860 | 144 | 0.011 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.011 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.011 | |
| ceramide metabolic process | GO:0006672 | 31 | 0.011 | |
| dipeptide transport | GO:0042938 | 2 | 0.011 | |
| chromatin modification | GO:0016568 | 187 | 0.011 | |
| extracellular matrix organization | GO:0030198 | 147 | 0.011 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.011 | |
| formation of organ boundary | GO:0010160 | 1 | 0.011 | |
| cellular response to carbohydrate stimulus | GO:0071322 | 50 | 0.011 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.011 | |
| protein localization to organelle | GO:0033365 | 185 | 0.011 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.011 | |
| engulfment of apoptotic cell | GO:0043652 | 3 | 0.011 | |
| dna templated transcription termination | GO:0006353 | 4 | 0.011 | |
| negative regulation of nervous system development | GO:0051961 | 156 | 0.011 | |
| cell cycle checkpoint | GO:0000075 | 47 | 0.011 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.011 | |
| negative regulation of proteolysis | GO:0045861 | 74 | 0.011 | |
| negative regulation of protein maturation | GO:1903318 | 79 | 0.011 | |
| protein import | GO:0017038 | 101 | 0.011 | |
| cognition | GO:0050890 | 149 | 0.011 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.010 | |
| histone h2a ubiquitination | GO:0033522 | 3 | 0.010 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.010 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 151 | 0.010 | |
| synapse organization | GO:0050808 | 125 | 0.010 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.010 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.010 | |
| positive regulation of mapk cascade | GO:0043410 | 170 | 0.010 | |
| response to acid chemical | GO:0001101 | 111 | 0.010 | |
| peptide hormone secretion | GO:0030072 | 109 | 0.010 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.010 | |
| wnt signaling pathway | GO:0016055 | 188 | 0.010 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.010 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.010 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.010 | |
