| protein catabolic process | GO:0030163 | 221 | 0.095 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.087 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.080 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.074 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 129 | 0.073 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.073 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.064 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.062 | |
| protein targeting | GO:0006605 | 143 | 0.060 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.059 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.057 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.051 | |
| intracellular protein transport | GO:0006886 | 204 | 0.049 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.048 | |
| transmembrane transport | GO:0055085 | 412 | 0.048 | |
| synaptic transmission | GO:0007268 | 329 | 0.046 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.046 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.045 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.044 | |
| membrane organization | GO:0061024 | 245 | 0.044 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 199 | 0.044 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.043 | |
| oxidation reduction process | GO:0055114 | 342 | 0.042 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.041 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.040 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.040 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.040 | |
| amine metabolic process | GO:0009308 | 45 | 0.039 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.039 | |
| metal ion homeostasis | GO:0055065 | 189 | 0.038 | |
| cation homeostasis | GO:0055080 | 212 | 0.038 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.038 | |
| cation transport | GO:0006812 | 399 | 0.037 | |
| nucleoside catabolic process | GO:0009164 | 206 | 0.037 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.036 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.036 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.036 | |
| modification dependent protein catabolic process | GO:0019941 | 133 | 0.036 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.036 | |
| phospholipid metabolic process | GO:0006644 | 87 | 0.035 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.035 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.035 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.034 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.034 | |
| mitochondrion organization | GO:0007005 | 134 | 0.034 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.034 | |
| cofactor metabolic process | GO:0051186 | 80 | 0.033 | |
| protein localization to organelle | GO:0033365 | 185 | 0.033 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.032 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.032 | |
| response to oxidative stress | GO:0006979 | 123 | 0.031 | |
| ribonucleoside catabolic process | GO:0042454 | 206 | 0.031 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.031 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.030 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.030 | |
| cellular homeostasis | GO:0019725 | 240 | 0.030 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.030 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.030 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.030 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.030 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.029 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 205 | 0.029 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.029 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.029 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.028 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.028 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.028 | |
| male gamete generation | GO:0048232 | 285 | 0.027 | |
| glycosyl compound catabolic process | GO:1901658 | 206 | 0.027 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.027 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.027 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.027 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.027 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.026 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.026 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.025 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.025 | |
| proteasomal protein catabolic process | GO:0010498 | 98 | 0.025 | |
| positive regulation of cellular catabolic process | GO:0031331 | 148 | 0.025 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.025 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.025 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.024 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 88 | 0.024 | |
| regulation of ion transport | GO:0043269 | 215 | 0.024 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.024 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.024 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.024 | |
| protein ubiquitination | GO:0016567 | 171 | 0.023 | |
| protein localization to membrane | GO:0072657 | 108 | 0.023 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.023 | |
| t cell activation | GO:0042110 | 289 | 0.022 | |
| regulation of protein transport | GO:0051223 | 163 | 0.022 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.021 | |
| regulation of protein localization | GO:0032880 | 231 | 0.021 | |
| cellular response to arsenic containing substance | GO:0071243 | 4 | 0.021 | |
| chromatin organization | GO:0006325 | 206 | 0.020 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.020 | |
| cellular chemical homeostasis | GO:0055082 | 215 | 0.020 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.020 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.020 | |
| organelle localization | GO:0051640 | 179 | 0.020 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.020 | |
| divalent inorganic cation homeostasis | GO:0072507 | 138 | 0.020 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.020 | |
| regulation of transmembrane transport | GO:0034762 | 128 | 0.020 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.020 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.020 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.020 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.020 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.019 | |
| mitochondrial transport | GO:0006839 | 36 | 0.019 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.019 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.019 | |
| learning or memory | GO:0007611 | 148 | 0.019 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.019 | |
| organophosphate biosynthetic process | GO:0090407 | 122 | 0.018 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.018 | |
| organic acid transport | GO:0015849 | 101 | 0.018 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.018 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.018 | |
| spermatogenesis | GO:0007283 | 284 | 0.018 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.018 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.018 | |
| calcium ion homeostasis | GO:0055074 | 127 | 0.018 | |
| monocarboxylic acid metabolic process | GO:0032787 | 191 | 0.018 | |
| cellularization | GO:0007349 | 1 | 0.018 | |
| regulation of intracellular protein transport | GO:0033157 | 82 | 0.018 | |
| vesicle organization | GO:0016050 | 60 | 0.018 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.017 | |
| cognition | GO:0050890 | 149 | 0.017 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.017 | |
| response to radiation | GO:0009314 | 165 | 0.017 | |
| lymphocyte differentiation | GO:0030098 | 242 | 0.017 | |
| memory | GO:0007613 | 58 | 0.017 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 194 | 0.017 | |
| regulation of t cell activation | GO:0050863 | 170 | 0.017 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.017 | |
| guanosine containing compound metabolic process | GO:1901068 | 144 | 0.017 | |
| cellular ion homeostasis | GO:0006873 | 165 | 0.017 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.017 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.016 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.016 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.016 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.016 | |
| carboxylic acid transport | GO:0046942 | 100 | 0.016 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.016 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.016 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.016 | |
| anion transport | GO:0006820 | 177 | 0.016 | |
| cofactor biosynthetic process | GO:0051188 | 41 | 0.016 | |
| cellular metal ion homeostasis | GO:0006875 | 151 | 0.016 | |
| fat cell differentiation | GO:0045444 | 160 | 0.016 | |
| organic anion transport | GO:0015711 | 137 | 0.016 | |
| synapse organization | GO:0050808 | 125 | 0.016 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.016 | |
| copii coated vesicle budding | GO:0090114 | 2 | 0.015 | |
| coenzyme biosynthetic process | GO:0009108 | 23 | 0.015 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.015 | |
| glycerolipid metabolic process | GO:0046486 | 122 | 0.015 | |
| regulation of voltage gated calcium channel activity | GO:1901385 | 4 | 0.015 | |
| response to oxygen levels | GO:0070482 | 62 | 0.015 | |
| positive regulation of cell development | GO:0010720 | 237 | 0.015 | |
| wnt signaling pathway | GO:0016055 | 188 | 0.015 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.015 | |
| regulation of neuron differentiation | GO:0045664 | 281 | 0.015 | |
| regulation of cytokine production | GO:0001817 | 266 | 0.015 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 59 | 0.015 | |
| sequestering of calcium ion | GO:0051208 | 18 | 0.015 | |
| dna metabolic process | GO:0006259 | 303 | 0.015 | |
| protein polyubiquitination | GO:0000209 | 33 | 0.015 | |
| response to inorganic substance | GO:0010035 | 96 | 0.014 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.014 | |
| forebrain development | GO:0030900 | 302 | 0.014 | |
| regulation of secretion by cell | GO:1903530 | 249 | 0.014 | |
| lipid localization | GO:0010876 | 126 | 0.014 | |
| endomembrane system organization | GO:0010256 | 147 | 0.014 | |
| ossification | GO:0001503 | 216 | 0.014 | |
| amide transport | GO:0042886 | 138 | 0.014 | |
| lipid biosynthetic process | GO:0008610 | 179 | 0.014 | |
| sensory perception | GO:0007600 | 245 | 0.014 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.014 | |
| regulation of mrna polyadenylation | GO:1900363 | 1 | 0.014 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.014 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.014 | |
| regulation of mitochondrial fission | GO:0090140 | 3 | 0.014 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.014 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.014 | |
| regulation of ion transmembrane transport | GO:0034765 | 119 | 0.014 | |
| establishment of melanosome localization | GO:0032401 | 11 | 0.014 | |
| response to growth factor | GO:0070848 | 198 | 0.014 | |
| regulation of establishment of protein localization | GO:0070201 | 181 | 0.014 | |
| skeletal system development | GO:0001501 | 356 | 0.014 | |
| synapsis | GO:0007129 | 34 | 0.013 | |
| fertilization | GO:0009566 | 127 | 0.013 | |
| regulation of vesicle mediated transport | GO:0060627 | 139 | 0.013 | |
| protein refolding | GO:0042026 | 1 | 0.013 | |
| single organism nuclear import | GO:1902593 | 95 | 0.013 | |
| calcium ion transport | GO:0006816 | 159 | 0.013 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 122 | 0.013 | |
| protein import into nucleus | GO:0006606 | 95 | 0.013 | |
| regulation of nucleotide catabolic process | GO:0030811 | 122 | 0.013 | |
| multi multicellular organism process | GO:0044706 | 109 | 0.013 | |
| skeletal muscle organ development | GO:0060538 | 163 | 0.013 | |
| regulation of anatomical structure size | GO:0090066 | 178 | 0.013 | |
| spermatid differentiation | GO:0048515 | 115 | 0.013 | |
| mitochondrion transport along microtubule | GO:0047497 | 3 | 0.013 | |
| localization within membrane | GO:0051668 | 4 | 0.013 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.013 | |
| regulation of secretion | GO:0051046 | 274 | 0.013 | |
| translation | GO:0006412 | 93 | 0.013 | |
| misfolded protein transport | GO:0070843 | 1 | 0.013 | |
| regulation of homeostatic process | GO:0032844 | 182 | 0.013 | |
| muscle tissue development | GO:0060537 | 308 | 0.013 | |
| lymphocyte proliferation | GO:0046651 | 164 | 0.013 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.013 | |
| response to amino acid | GO:0043200 | 37 | 0.012 | |
| protein import | GO:0017038 | 101 | 0.012 | |
| intracellular receptor signaling pathway | GO:0030522 | 74 | 0.012 | |
| peptide transport | GO:0015833 | 133 | 0.012 | |
| cytokine production | GO:0001816 | 319 | 0.012 | |
| positive regulation of protein transport | GO:0051222 | 93 | 0.012 | |
| response to acid chemical | GO:0001101 | 111 | 0.012 | |
| cellular calcium ion homeostasis | GO:0006874 | 119 | 0.012 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.012 | |
| ubiquitin dependent protein catabolic process via the multivesicular body sorting pathway | GO:0043162 | 3 | 0.012 | |
| cellular response to oxidative stress | GO:0034599 | 76 | 0.012 | |
| regulation of cell activation | GO:0050865 | 289 | 0.012 | |
| negative regulation of immune system process | GO:0002683 | 209 | 0.012 | |
| negative regulation of protein modification process | GO:0031400 | 163 | 0.012 | |
| spermatid development | GO:0007286 | 108 | 0.012 | |
| compound eye development | GO:0048749 | 1 | 0.012 | |
| early endosome to late endosome transport | GO:0045022 | 2 | 0.012 | |
| positive regulation of neuron projection development | GO:0010976 | 79 | 0.012 | |
| negative regulation of nervous system development | GO:0051961 | 156 | 0.012 | |
| vesicle localization | GO:0051648 | 86 | 0.012 | |
| regulation of protein import into nucleus | GO:0042306 | 52 | 0.012 | |
| calcium ion transmembrane transport | GO:0070588 | 85 | 0.012 | |
| bmp signaling pathway | GO:0030509 | 93 | 0.012 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.012 | |
| regulation of nucleoside metabolic process | GO:0009118 | 130 | 0.012 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.012 | |
| cell maturation | GO:0048469 | 127 | 0.012 | |
| camera type eye development | GO:0043010 | 266 | 0.012 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.012 | |
| cellular response to acid chemical | GO:0071229 | 68 | 0.012 | |
| regulation of system process | GO:0044057 | 200 | 0.012 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.011 | |
| chromosome organization involved in meiosis | GO:0070192 | 39 | 0.011 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.011 | |
| establishment of protein localization to endoplasmic reticulum | GO:0072599 | 2 | 0.011 | |
| protein targeting to vacuole | GO:0006623 | 3 | 0.011 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.011 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.011 | |
| telencephalon development | GO:0021537 | 186 | 0.011 | |
| sodium ion transport | GO:0006814 | 73 | 0.011 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 73 | 0.011 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.011 | |
| coenzyme metabolic process | GO:0006732 | 52 | 0.011 | |
| maintenance of location | GO:0051235 | 89 | 0.011 | |
| mitochondrion degradation | GO:0000422 | 3 | 0.011 | |
| inflammatory response | GO:0006954 | 244 | 0.011 | |
| rho protein signal transduction | GO:0007266 | 32 | 0.011 | |
| atp metabolic process | GO:0046034 | 75 | 0.011 | |
| glucose homeostasis | GO:0042593 | 128 | 0.011 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.011 | |
| establishment of mitochondrion localization | GO:0051654 | 4 | 0.011 | |
| nuclear import | GO:0051170 | 95 | 0.011 | |
| response to uv | GO:0009411 | 44 | 0.011 | |
| cellular response to biotic stimulus | GO:0071216 | 92 | 0.011 | |
| innate immune response | GO:0045087 | 157 | 0.011 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.011 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 157 | 0.011 | |
| melanosome localization | GO:0032400 | 12 | 0.011 | |
| regulation of protein complex assembly | GO:0043254 | 83 | 0.011 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.011 | |
| detection of stimulus | GO:0051606 | 84 | 0.011 | |
| lateral inhibition | GO:0046331 | 1 | 0.011 | |
| regulation of cell motility | GO:2000145 | 236 | 0.011 | |
| establishment of vesicle localization | GO:0051650 | 81 | 0.011 | |
| regulation of ossification | GO:0030278 | 112 | 0.011 | |
| regulation of ion homeostasis | GO:2000021 | 64 | 0.011 | |
| response to decreased oxygen levels | GO:0036293 | 59 | 0.011 | |
| gtp metabolic process | GO:0046039 | 144 | 0.011 | |
| apoptotic mitochondrial changes | GO:0008637 | 48 | 0.011 | |
| regulation of cell migration | GO:0030334 | 219 | 0.011 | |
| regulation of cellular component size | GO:0032535 | 121 | 0.011 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 57 | 0.011 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 57 | 0.011 | |
| nuclear transport | GO:0051169 | 139 | 0.011 | |
| cytokinetic process | GO:0032506 | 2 | 0.011 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 58 | 0.011 | |
| peptidyl tyrosine phosphorylation | GO:0018108 | 143 | 0.011 | |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.010 | |
| hormone secretion | GO:0046879 | 128 | 0.010 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.010 | |
| rhodopsin mediated signaling pathway | GO:0016056 | 4 | 0.010 | |
| sperm motility | GO:0030317 | 47 | 0.010 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.010 | |
| oocyte axis specification | GO:0007309 | 2 | 0.010 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.010 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.010 | |
| chemotaxis | GO:0006935 | 247 | 0.010 | |
| response to light stimulus | GO:0009416 | 135 | 0.010 | |
| positive regulation of t cell activation | GO:0050870 | 101 | 0.010 | |
| male anatomical structure morphogenesis | GO:0090598 | 4 | 0.010 | |
| glycerophospholipid metabolic process | GO:0006650 | 71 | 0.010 | |
| regulation of transmembrane receptor protein serine threonine kinase signaling pathway | GO:0090092 | 112 | 0.010 | |
| olfactory learning | GO:0008355 | 2 | 0.010 | |
