| mrna processing | GO:0006397 | 63 | 0.228 | |
| rna processing | GO:0006396 | 105 | 0.155 | Yeast Zebrafish |
| ncrna processing | GO:0034470 | 26 | 0.100 | Yeast Zebrafish |
| organelle assembly | GO:0070925 | 177 | 0.068 | Yeast |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.063 | |
| mrna metabolic process | GO:0016071 | 84 | 0.061 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.056 | |
| translation | GO:0006412 | 93 | 0.055 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.053 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.052 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.052 | |
| primary mirna processing | GO:0031053 | 1 | 0.049 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.043 | |
| rna interference | GO:0016246 | 2 | 0.042 | |
| organelle fission | GO:0048285 | 170 | 0.040 | |
| maturation of 5 8s rrna | GO:0000460 | 1 | 0.038 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.038 | |
| maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna | GO:0000466 | 1 | 0.038 | |
| nuclear division | GO:0000280 | 158 | 0.035 | |
| action potential | GO:0001508 | 78 | 0.035 | |
| posttranscriptional gene silencing | GO:0016441 | 10 | 0.035 | |
| blastocyst development | GO:0001824 | 80 | 0.030 | |
| gene silencing by rna | GO:0031047 | 19 | 0.030 | |
| transmission of nerve impulse | GO:0019226 | 76 | 0.028 | |
| blood vessel morphogenesis | GO:0048514 | 285 | 0.027 | |
| maturation of ssu rrna | GO:0030490 | 1 | 0.025 | |
| angiogenesis | GO:0001525 | 201 | 0.025 | |
| regulation of rna stability | GO:0043487 | 26 | 0.024 | |
| chromatin organization | GO:0006325 | 206 | 0.023 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.023 | |
| stem cell development | GO:0048864 | 219 | 0.022 | |
| pore complex assembly | GO:0046931 | 3 | 0.022 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.022 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.022 | |
| chemotaxis | GO:0006935 | 247 | 0.021 | |
| mrna catabolic process | GO:0006402 | 22 | 0.021 | |
| central nervous system neuron axonogenesis | GO:0021955 | 28 | 0.021 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.020 | |
| transcription from rna polymerase iii promoter | GO:0006383 | 3 | 0.020 | |
| rna phosphodiester bond hydrolysis | GO:0090501 | 19 | 0.020 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.019 | |
| regulation of transcription from rna polymerase iii promoter | GO:0006359 | 2 | 0.019 | |
| chromatin modification | GO:0016568 | 187 | 0.019 | |
| dna metabolic process | GO:0006259 | 303 | 0.019 | |
| snorna metabolic process | GO:0016074 | 1 | 0.018 | |
| mitotic chromosome condensation | GO:0007076 | 1 | 0.018 | |
| neuronal action potential | GO:0019228 | 54 | 0.018 | |
| blastocyst growth | GO:0001832 | 23 | 0.018 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.018 | |
| positive regulation of dna templated transcription initiation | GO:2000144 | 5 | 0.018 | |
| nuclear export | GO:0051168 | 34 | 0.018 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.017 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.017 | Yeast |
| cell adhesion | GO:0007155 | 329 | 0.017 | |
| gonad development | GO:0008406 | 141 | 0.017 | |
| sequestering of metal ion | GO:0051238 | 19 | 0.017 | |
| cleavage involved in rrna processing | GO:0000469 | 1 | 0.016 | |
| stem cell differentiation | GO:0048863 | 268 | 0.016 | |
| protein import | GO:0017038 | 101 | 0.016 | |
| dna recombination | GO:0006310 | 92 | 0.016 | |
| nuclear transport | GO:0051169 | 139 | 0.016 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.016 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.015 | |
| trna aminoacylation for protein translation | GO:0006418 | 1 | 0.015 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.015 | |
| cytokine production | GO:0001816 | 319 | 0.015 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.015 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.015 | |
| amine metabolic process | GO:0009308 | 45 | 0.015 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.015 | |
| regulation of cytokine production | GO:0001817 | 266 | 0.015 | |
| negative regulation of fibroblast apoptotic process | GO:2000270 | 6 | 0.015 | |
| cell growth | GO:0016049 | 130 | 0.014 | |
| rna catabolic process | GO:0006401 | 29 | 0.014 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.014 | |
| multicellular organismal signaling | GO:0035637 | 91 | 0.014 | |
| central nervous system neuron differentiation | GO:0021953 | 162 | 0.014 | |
| cell division | GO:0051301 | 120 | 0.014 | |
| rhythmic process | GO:0048511 | 174 | 0.013 | |
| regulation of cell division | GO:0051302 | 76 | 0.013 | |
| dna conformation change | GO:0071103 | 37 | 0.013 | |
| trna aminoacylation | GO:0043039 | 1 | 0.013 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.013 | |
| interspecies interaction between organisms | GO:0044419 | 83 | 0.013 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.013 | |
| protein acylation | GO:0043543 | 64 | 0.013 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.013 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.012 | |
| intracellular protein transport | GO:0006886 | 204 | 0.012 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.012 | |
| ribosomal small subunit biogenesis | GO:0042274 | 4 | 0.012 | |
| multi multicellular organism process | GO:0044706 | 109 | 0.012 | |
| regulation of translation | GO:0006417 | 71 | 0.012 | |
| positive regulation of gene silencing by mirna | GO:2000637 | 1 | 0.012 | |
| compound eye development | GO:0048749 | 1 | 0.012 | |
| myelination | GO:0042552 | 74 | 0.012 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.012 | |
| leukocyte mediated immunity | GO:0002443 | 174 | 0.012 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.011 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.011 | |
| transcription coupled nucleotide excision repair | GO:0006283 | 2 | 0.011 | |
| amino acid activation | GO:0043038 | 1 | 0.011 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.011 | |
| stem cell maintenance | GO:0019827 | 130 | 0.010 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 83 | 0.010 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.010 | |
| regulation of cell cycle phase transition | GO:1901987 | 77 | 0.010 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.010 | |
