| cilium assembly | GO:0042384 | 81 | 0.170 | Zebrafish |
| smoothened signaling pathway | GO:0007224 | 105 | 0.055 | |
| cilium morphogenesis | GO:0060271 | 102 | 0.051 | Zebrafish |
| dna repair | GO:0006281 | 107 | 0.049 | |
| microtubule based movement | GO:0007018 | 84 | 0.042 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 139 | 0.038 | Zebrafish |
| microtubule based process | GO:0007017 | 236 | 0.036 | |
| dna metabolic process | GO:0006259 | 303 | 0.031 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.031 | |
| protein localization to organelle | GO:0033365 | 185 | 0.030 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.030 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.026 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.025 | |
| limb development | GO:0060173 | 166 | 0.025 | |
| ketone catabolic process | GO:0042182 | 3 | 0.025 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.025 | |
| rna interference | GO:0016246 | 2 | 0.024 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.023 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.023 | |
| intraciliary transport | GO:0042073 | 9 | 0.022 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.022 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.021 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.020 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.020 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.020 | |
| amine metabolic process | GO:0009308 | 45 | 0.020 | |
| regionalization | GO:0003002 | 337 | 0.020 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.020 | |
| interleukin 8 production | GO:0032637 | 4 | 0.020 | |
| lung development | GO:0030324 | 164 | 0.019 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.019 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.018 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.018 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.018 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.018 | |
| positive regulation of apoptotic signaling pathway | GO:2001235 | 95 | 0.018 | |
| epithelial cilium movement | GO:0003351 | 12 | 0.018 | |
| regulation of cell activation | GO:0050865 | 289 | 0.018 | |
| negative regulation of protein modification process | GO:0031400 | 163 | 0.017 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.017 | |
| muscle tissue development | GO:0060537 | 308 | 0.017 | |
| organelle assembly | GO:0070925 | 177 | 0.017 | Zebrafish |
| oxidation reduction process | GO:0055114 | 342 | 0.017 | |
| reactive oxygen species biosynthetic process | GO:1903409 | 8 | 0.017 | |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.016 | |
| camera type eye development | GO:0043010 | 266 | 0.016 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.016 | |
| t cell activation | GO:0042110 | 289 | 0.016 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.016 | |
| cytokine production | GO:0001816 | 319 | 0.016 | |
| digestive tract development | GO:0048565 | 190 | 0.016 | |
| hatching | GO:0035188 | 4 | 0.016 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.016 | |
| protein maturation | GO:0051604 | 176 | 0.016 | |
| skeletal system development | GO:0001501 | 356 | 0.016 | |
| cellular aldehyde metabolic process | GO:0006081 | 12 | 0.015 | |
| epithelial cell development | GO:0002064 | 159 | 0.015 | |
| appendage morphogenesis | GO:0035107 | 149 | 0.015 | |
| telencephalon development | GO:0021537 | 186 | 0.015 | |
| fat cell differentiation | GO:0045444 | 160 | 0.015 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 106 | 0.015 | |
| microtubule based transport | GO:0010970 | 50 | 0.015 | |
| extrinsic apoptotic signaling pathway | GO:0097191 | 126 | 0.015 | |
| organism emergence from protective structure | GO:0071684 | 4 | 0.015 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.014 | |
| monocarboxylic acid metabolic process | GO:0032787 | 191 | 0.014 | |
| embryonic appendage morphogenesis | GO:0035113 | 126 | 0.014 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.014 | |
| positive regulation of interleukin 8 production | GO:0032757 | 2 | 0.014 | |
| urogenital system development | GO:0001655 | 261 | 0.014 | Zebrafish |
| embryonic organ morphogenesis | GO:0048562 | 276 | 0.014 | |
| regulation of interleukin 8 production | GO:0032677 | 3 | 0.014 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.014 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.014 | |
| respiratory tube development | GO:0030323 | 167 | 0.014 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.013 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.013 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.013 | |
| spermatogenesis | GO:0007283 | 284 | 0.013 | |
| regulation of androgen receptor signaling pathway | GO:0060765 | 3 | 0.013 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.013 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.013 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.013 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.013 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.013 | |
| regulation of t cell activation | GO:0050863 | 170 | 0.013 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.012 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.012 | |
| appendage development | GO:0048736 | 166 | 0.012 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.012 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.012 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.012 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.012 | |
| epidermis development | GO:0008544 | 187 | 0.012 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.012 | |
| male gamete generation | GO:0048232 | 285 | 0.012 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.012 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.012 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.012 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.012 | |
| skin development | GO:0043588 | 220 | 0.012 | |
| kidney development | GO:0001822 | 213 | 0.012 | Zebrafish |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.012 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.012 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.012 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.011 | |
| neural tube development | GO:0021915 | 160 | 0.011 | |
| lymphocyte proliferation | GO:0046651 | 164 | 0.011 | |
| regulation of cytokine production | GO:0001817 | 266 | 0.011 | |
| cellular response to lipid | GO:0071396 | 145 | 0.011 | |
| positive regulation of cytokine production | GO:0001819 | 174 | 0.011 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.011 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.011 | |
| locomotory behavior | GO:0007626 | 195 | 0.011 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.011 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 80 | 0.011 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.011 | |
| cytoskeleton dependent intracellular transport | GO:0030705 | 50 | 0.011 | |
| embryonic limb morphogenesis | GO:0030326 | 126 | 0.011 | |
| limb morphogenesis | GO:0035108 | 149 | 0.011 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.011 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.011 | |
| alpha amino acid metabolic process | GO:1901605 | 59 | 0.011 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.011 | |
| atp metabolic process | GO:0046034 | 75 | 0.011 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.011 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.011 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.011 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.011 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.011 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.010 | |
| wnt signaling pathway | GO:0016055 | 188 | 0.010 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.010 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.010 | |
| organelle localization | GO:0051640 | 179 | 0.010 | Zebrafish |
| metencephalon development | GO:0022037 | 89 | 0.010 | |
| hormone metabolic process | GO:0042445 | 86 | 0.010 | |
| intracellular protein transport | GO:0006886 | 204 | 0.010 | |
| carboxylic acid biosynthetic process | GO:0046394 | 86 | 0.010 | |
| intraciliary retrograde transport | GO:0035721 | 3 | 0.010 | |
| regulation of protein localization | GO:0032880 | 231 | 0.010 | |
| negative regulation of protein phosphorylation | GO:0001933 | 126 | 0.010 | |
