| dna metabolic process | GO:0006259 | 303 | 0.803 | Yeast |
| dna repair | GO:0006281 | 107 | 0.738 | Yeast |
| meiotic cell cycle process | GO:1903046 | 77 | 0.559 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.535 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.465 | Yeast |
| telomere maintenance | GO:0000723 | 19 | 0.384 | |
| double strand break repair | GO:0006302 | 48 | 0.357 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.332 | Yeast |
| negative regulation of cell cycle | GO:0045786 | 123 | 0.299 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 49 | 0.295 | |
| dna dependent dna replication | GO:0006261 | 24 | 0.291 | Yeast |
| synapsis | GO:0007129 | 34 | 0.229 | |
| chromatin organization | GO:0006325 | 206 | 0.211 | |
| rna dependent dna replication | GO:0006278 | 3 | 0.194 | |
| nuclear division | GO:0000280 | 158 | 0.189 | |
| organelle fission | GO:0048285 | 170 | 0.183 | |
| meiosis i | GO:0007127 | 60 | 0.172 | |
| histone modification | GO:0016570 | 159 | 0.165 | |
| dna conformation change | GO:0071103 | 37 | 0.157 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.156 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.149 | |
| mismatch repair | GO:0006298 | 8 | 0.146 | Yeast |
| chromosome organization involved in meiosis | GO:0070192 | 39 | 0.145 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.143 | |
| production of molecular mediator of immune response | GO:0002440 | 103 | 0.127 | |
| reciprocal dna recombination | GO:0035825 | 16 | 0.117 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.111 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.109 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.094 | |
| intra s dna damage checkpoint | GO:0031573 | 4 | 0.090 | |
| protein import | GO:0017038 | 101 | 0.088 | |
| base excision repair | GO:0006284 | 9 | 0.087 | |
| blastocyst growth | GO:0001832 | 23 | 0.086 | |
| chromosome segregation | GO:0007059 | 48 | 0.084 | |
| regulation of cell cycle g2 m phase transition | GO:1902749 | 10 | 0.083 | |
| telomere maintenance via telomerase | GO:0007004 | 1 | 0.081 | |
| meiotic chromosome segregation | GO:0045132 | 19 | 0.079 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.079 | |
| dna dependent dna replication maintenance of fidelity | GO:0045005 | 3 | 0.079 | |
| regulation of cell cycle phase transition | GO:1901987 | 77 | 0.079 | |
| blastocyst development | GO:0001824 | 80 | 0.078 | |
| dna recombination | GO:0006310 | 92 | 0.078 | |
| dna geometric change | GO:0032392 | 7 | 0.077 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.073 | |
| telomere capping | GO:0016233 | 4 | 0.070 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.068 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 48 | 0.067 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.067 | |
| immune effector process | GO:0002252 | 321 | 0.065 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.062 | |
| amine metabolic process | GO:0009308 | 45 | 0.061 | |
| dna replication | GO:0006260 | 52 | 0.061 | Yeast |
| negative regulation of mitotic cell cycle | GO:0045930 | 58 | 0.061 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.060 | Yeast |
| somatic cell dna recombination | GO:0016444 | 51 | 0.060 | |
| intracellular protein transport | GO:0006886 | 204 | 0.058 | |
| reciprocal meiotic recombination | GO:0007131 | 16 | 0.058 | |
| negative regulation of cell cycle process | GO:0010948 | 69 | 0.057 | |
| somatic diversification of immune receptors | GO:0002200 | 53 | 0.056 | |
| stem cell development | GO:0048864 | 219 | 0.055 | |
| maintenance of protein location in nucleus | GO:0051457 | 2 | 0.052 | |
| microtubule based process | GO:0007017 | 236 | 0.051 | |
| double strand break repair via nonhomologous end joining | GO:0006303 | 10 | 0.050 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.049 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.049 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.048 | |
| nuclear import | GO:0051170 | 95 | 0.045 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.045 | |
| cell cycle checkpoint | GO:0000075 | 47 | 0.045 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.044 | |
| atp catabolic process | GO:0006200 | 55 | 0.044 | Yeast |
| stem cell maintenance | GO:0019827 | 130 | 0.042 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.042 | Yeast |
| organophosphate catabolic process | GO:0046434 | 232 | 0.039 | Yeast |
| response to radiation | GO:0009314 | 165 | 0.038 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.038 | |
| recombinational repair | GO:0000725 | 21 | 0.036 | |
| ribonucleoside catabolic process | GO:0042454 | 206 | 0.035 | Yeast |
| mitotic cell cycle checkpoint | GO:0007093 | 31 | 0.035 | |
| mitotic chromosome condensation | GO:0007076 | 1 | 0.034 | |
| somatic diversification of immunoglobulins | GO:0016445 | 43 | 0.034 | |
| centrosome organization | GO:0051297 | 26 | 0.034 | |
| dna duplex unwinding | GO:0032508 | 7 | 0.034 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.034 | |
| multicellular organism growth | GO:0035264 | 161 | 0.033 | |
| negative regulation of dna dependent dna replication | GO:2000104 | 1 | 0.033 | |
| lateral inhibition | GO:0046331 | 1 | 0.033 | Fly |
| immunoglobulin production | GO:0002377 | 73 | 0.032 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.032 | |
| mitotic recombination | GO:0006312 | 3 | 0.031 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.031 | |
| protein targeting | GO:0006605 | 143 | 0.031 | |
| response to ionizing radiation | GO:0010212 | 42 | 0.030 | |
| protein localization to organelle | GO:0033365 | 185 | 0.030 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 57 | 0.029 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.029 | |
| double strand break repair via homologous recombination | GO:0000724 | 21 | 0.028 | |
| inner cell mass cell proliferation | GO:0001833 | 15 | 0.028 | |
| nucleotide excision repair | GO:0006289 | 13 | 0.028 | |
| regulation of peptidyl lysine acetylation | GO:2000756 | 22 | 0.028 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 45 | 0.028 | |
| lymphocyte differentiation | GO:0030098 | 242 | 0.027 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.027 | |
| dna replication independent nucleosome assembly | GO:0006336 | 1 | 0.027 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.027 | |
| peptidyl lysine modification | GO:0018205 | 77 | 0.027 | |
| maintenance of protein localization in organelle | GO:0072595 | 2 | 0.027 | |
| positive regulation of histone h3 k4 methylation | GO:0051571 | 5 | 0.027 | |
| regulation of transcription during meiosis | GO:0051037 | 1 | 0.026 | |
| negative regulation of dna replication | GO:0008156 | 4 | 0.026 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.026 | Yeast |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.026 | Yeast |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.026 | |
| leukocyte activation involved in immune response | GO:0002366 | 126 | 0.025 | |
| response to growth factor | GO:0070848 | 198 | 0.025 | |
| regulation of chromatin modification | GO:1903308 | 57 | 0.025 | |
| protein ubiquitination | GO:0016567 | 171 | 0.025 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.025 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.025 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.025 | Yeast |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.025 | |
| antimicrobial peptide production | GO:0002775 | 2 | 0.024 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.024 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.024 | Yeast |
| nucleoside triphosphate catabolic process | GO:0009143 | 205 | 0.024 | Yeast |
| regulation of cell activation | GO:0050865 | 289 | 0.024 | |
| protein acylation | GO:0043543 | 64 | 0.024 | |
| skeletal system development | GO:0001501 | 356 | 0.023 | |
| cell activation involved in immune response | GO:0002263 | 126 | 0.023 | |
| regulation of histone methylation | GO:0031060 | 30 | 0.023 | |
| b cell activation | GO:0042113 | 161 | 0.023 | |
| mrna transport | GO:0051028 | 13 | 0.023 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.023 | |
| somatic diversification of immune receptors via germline recombination within a single locus | GO:0002562 | 51 | 0.023 | |
| regulation of dna endoreduplication | GO:0032875 | 3 | 0.022 | |
| microtubule organizing center organization | GO:0031023 | 28 | 0.022 | |
| leukocyte mediated immunity | GO:0002443 | 174 | 0.022 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 199 | 0.021 | Yeast |
| mitotic nuclear division | GO:0007067 | 48 | 0.021 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.021 | |
| immunoglobulin mediated immune response | GO:0016064 | 69 | 0.021 | |
| somatic recombination of immunoglobulin gene segments | GO:0016447 | 42 | 0.021 | |
| cellular response to growth factor stimulus | GO:0071363 | 197 | 0.021 | |
| sister chromatid cohesion | GO:0007062 | 12 | 0.021 | |
| dna integrity checkpoint | GO:0031570 | 28 | 0.021 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.021 | Yeast |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.020 | Yeast |
| positive regulation of hydrolase activity | GO:0051345 | 148 | 0.020 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.020 | |
| isotype switching | GO:0045190 | 36 | 0.020 | |
| cell cycle g1 s phase transition | GO:0044843 | 57 | 0.020 | |
| positive regulation of immune effector process | GO:0002699 | 107 | 0.020 | |
| maintenance of location | GO:0051235 | 89 | 0.019 | |
| extrinsic apoptotic signaling pathway | GO:0097191 | 126 | 0.019 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.019 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.019 | Yeast |
| telomere maintenance via telomere lengthening | GO:0010833 | 4 | 0.019 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.019 | Yeast |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 194 | 0.019 | |
| stem cell differentiation | GO:0048863 | 268 | 0.019 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.018 | Yeast |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.018 | Yeast |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.018 | Yeast |
| compound eye development | GO:0048749 | 1 | 0.018 | |
| maintenance of dna methylation | GO:0010216 | 4 | 0.018 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.018 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.018 | Yeast |
| antimicrobial peptide biosynthetic process | GO:0002777 | 2 | 0.018 | |
| sister chromatid segregation | GO:0000819 | 20 | 0.018 | |
| translation | GO:0006412 | 93 | 0.018 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.018 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.018 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.018 | Yeast |
| non recombinational repair | GO:0000726 | 10 | 0.018 | |
| synaptonemal complex assembly | GO:0007130 | 13 | 0.018 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.018 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.017 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.017 | |
| protein autophosphorylation | GO:0046777 | 61 | 0.017 | |
| rna transport | GO:0050658 | 18 | 0.017 | |
| regulation of establishment of protein localization | GO:0070201 | 181 | 0.017 | |
| b cell mediated immunity | GO:0019724 | 71 | 0.017 | |
| methylation | GO:0032259 | 134 | 0.017 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.017 | |
| negative regulation of chromatin silencing | GO:0031936 | 1 | 0.017 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.017 | Yeast |
| cellular response to transforming growth factor beta stimulus | GO:0071560 | 88 | 0.017 | |
| mitotic sister chromatid segregation | GO:0000070 | 14 | 0.017 | |
| regulation of antimicrobial peptide biosynthetic process | GO:0002805 | 1 | 0.016 | |
| adaptive immune response | GO:0002250 | 155 | 0.016 | |
| regulation of response to dna damage stimulus | GO:2001020 | 34 | 0.016 | |
| protein import into nucleus | GO:0006606 | 95 | 0.016 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.016 | Yeast |
| positive regulation of cell death | GO:0010942 | 224 | 0.016 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 57 | 0.016 | Yeast |
| positive regulation of dna templated transcription initiation | GO:2000144 | 5 | 0.016 | |
| regulation of g1 s transition of mitotic cell cycle | GO:2000045 | 35 | 0.016 | |
| spermatid development | GO:0007286 | 108 | 0.016 | |
| protein maturation | GO:0051604 | 176 | 0.016 | |
| antibacterial peptide biosynthetic process | GO:0002780 | 2 | 0.016 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.015 | |
| nuclear transport | GO:0051169 | 139 | 0.015 | |
| positive regulation of mitotic cell cycle phase transition | GO:1901992 | 17 | 0.015 | |
| regulation of histone acetylation | GO:0035065 | 19 | 0.015 | |
| dendrite development | GO:0016358 | 115 | 0.015 | Fly |
| nucleoside catabolic process | GO:0009164 | 206 | 0.015 | Yeast |
| regulation of binding | GO:0051098 | 111 | 0.015 | |
| b cell differentiation | GO:0030183 | 78 | 0.015 | |
| mitotic g1 dna damage checkpoint | GO:0031571 | 4 | 0.015 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.015 | |
| chromatin modification | GO:0016568 | 187 | 0.015 | |
| epithelial tube morphogenesis | GO:0060562 | 303 | 0.015 | |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.014 | |
| dna replication checkpoint | GO:0000076 | 2 | 0.014 | |
| nucleus organization | GO:0006997 | 45 | 0.014 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.014 | |
| lymphocyte mediated immunity | GO:0002449 | 139 | 0.014 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.014 | |
| histone acetylation | GO:0016573 | 41 | 0.014 | |
| gene silencing | GO:0016458 | 38 | 0.014 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.014 | |
| response to uv | GO:0009411 | 44 | 0.014 | |
| histone mrna metabolic process | GO:0008334 | 3 | 0.014 | |
| regulation of chromatin silencing | GO:0031935 | 2 | 0.014 | |
| liver development | GO:0001889 | 66 | 0.014 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.014 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.013 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.013 | Yeast |
| regulation of intracellular transport | GO:0032386 | 159 | 0.013 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.013 | Yeast |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.013 | |
| rna interference | GO:0016246 | 2 | 0.013 | |
| dna damage checkpoint | GO:0000077 | 26 | 0.013 | |
| hepaticobiliary system development | GO:0061008 | 67 | 0.013 | |
| adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | GO:0002460 | 145 | 0.013 | |
| protein processing | GO:0016485 | 163 | 0.013 | |
| regulation of chromatin organization | GO:1902275 | 57 | 0.013 | |
| ventricular system development | GO:0021591 | 27 | 0.013 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.013 | Yeast |
| regulation of dna recombination | GO:0000018 | 34 | 0.012 | |
| regulation of dna damage checkpoint | GO:2000001 | 3 | 0.012 | |
| somatic diversification of immune receptors via somatic mutation | GO:0002566 | 8 | 0.012 | |
| protein modification by small protein removal | GO:0070646 | 21 | 0.012 | |
| positive regulation of cell cycle | GO:0045787 | 92 | 0.012 | |
| cellular amide metabolic process | GO:0043603 | 58 | 0.012 | |
| regulation of defense response | GO:0031347 | 233 | 0.012 | |
| immunoglobulin production involved in immunoglobulin mediated immune response | GO:0002381 | 43 | 0.012 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.012 | |
| somatic diversification of immunoglobulins involved in immune response | GO:0002208 | 36 | 0.012 | |
| internal peptidyl lysine acetylation | GO:0018393 | 42 | 0.012 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.012 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.012 | Yeast |
| positive regulation of cell cycle phase transition | GO:1901989 | 17 | 0.012 | |
| negative regulation of organelle assembly | GO:1902116 | 2 | 0.012 | |
| regulation of histone modification | GO:0031056 | 56 | 0.012 | |
| regulation of dna binding | GO:0051101 | 39 | 0.012 | |
| response to transforming growth factor beta | GO:0071559 | 88 | 0.011 | |
| regulation of cell cycle g1 s phase transition | GO:1902806 | 35 | 0.011 | |
| regulation of extrinsic apoptotic signaling pathway | GO:2001236 | 77 | 0.011 | |
| macromolecule methylation | GO:0043414 | 120 | 0.011 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.011 | Yeast |
| response to amino acid | GO:0043200 | 37 | 0.011 | |
| regulation of chromosome organization | GO:0033044 | 83 | 0.011 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.011 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.011 | Yeast |
| b cell activation involved in immune response | GO:0002312 | 50 | 0.011 | |
| forebrain development | GO:0030900 | 302 | 0.011 | |
| male gamete generation | GO:0048232 | 285 | 0.011 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 73 | 0.011 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 80 | 0.011 | Yeast |
| ear development | GO:0043583 | 200 | 0.011 | |
| protein autoprocessing | GO:0016540 | 2 | 0.011 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.011 | Yeast |
| lymphocyte activation involved in immune response | GO:0002285 | 93 | 0.011 | |
| positive regulation of intracellular transport | GO:0032388 | 70 | 0.011 | |
| histone methylation | GO:0016571 | 71 | 0.011 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 58 | 0.011 | Yeast |
| nucleotide metabolic process | GO:0009117 | 332 | 0.011 | Yeast |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 57 | 0.011 | Yeast |
| cellular response to lipid | GO:0071396 | 145 | 0.011 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.011 | |
| response to light stimulus | GO:0009416 | 135 | 0.011 | |
| dna catabolic process | GO:0006308 | 19 | 0.010 | |
| mitotic sister chromatid cohesion | GO:0007064 | 1 | 0.010 | |
| positive regulation of defense response to bacterium | GO:1900426 | 1 | 0.010 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.010 | Yeast |
| negative regulation of gene expression epigenetic | GO:0045814 | 15 | 0.010 | |
| skin development | GO:0043588 | 220 | 0.010 | |
