| rna splicing | GO:0008380 | 54 | 0.512 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.455 | |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.385 | |
| histone h3 k4 trimethylation | GO:0080182 | 5 | 0.383 | |
| regulation of rna splicing | GO:0043484 | 37 | 0.219 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.219 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.215 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.144 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.143 | |
| rna processing | GO:0006396 | 105 | 0.136 | |
| regulation of carbohydrate metabolic process | GO:0006109 | 75 | 0.131 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.127 | |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.127 | |
| histone methylation | GO:0016571 | 71 | 0.120 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.120 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.120 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 8 | 0.119 | |
| regulation of histone methylation | GO:0031060 | 30 | 0.116 | |
| oxidation reduction process | GO:0055114 | 342 | 0.097 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.088 | |
| mrna processing | GO:0006397 | 63 | 0.085 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 12 | 0.082 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.079 | |
| peptidyl serine phosphorylation | GO:0018105 | 74 | 0.076 | |
| mrna metabolic process | GO:0016071 | 84 | 0.070 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.066 | |
| hexose metabolic process | GO:0019318 | 98 | 0.064 | |
| rac protein signal transduction | GO:0016601 | 13 | 0.063 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.059 | |
| glucosamine containing compound metabolic process | GO:1901071 | 3 | 0.057 | |
| glucose metabolic process | GO:0006006 | 92 | 0.056 | |
| regulation of reactive oxygen species biosynthetic process | GO:1903426 | 2 | 0.054 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.053 | |
| organelle localization | GO:0051640 | 179 | 0.052 | |
| protein homotrimerization | GO:0070207 | 4 | 0.052 | |
| peptidyl threonine phosphorylation | GO:0018107 | 31 | 0.051 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.051 | |
| organelle fission | GO:0048285 | 170 | 0.047 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.046 | |
| amino sugar metabolic process | GO:0006040 | 8 | 0.045 | |
| monosaccharide metabolic process | GO:0005996 | 106 | 0.044 | |
| positive regulation of histone methylation | GO:0031062 | 16 | 0.044 | |
| amine metabolic process | GO:0009308 | 45 | 0.042 | |
| methylation | GO:0032259 | 134 | 0.041 | |
| negative regulation of intracellular transport | GO:0032387 | 38 | 0.041 | |
| peptidyl lysine methylation | GO:0018022 | 29 | 0.040 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.039 | |
| nuclear division | GO:0000280 | 158 | 0.038 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.038 | |
| response to acid chemical | GO:0001101 | 111 | 0.038 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.038 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.037 | |
| protein glycosylation | GO:0006486 | 55 | 0.035 | |
| carbohydrate biosynthetic process | GO:0016051 | 74 | 0.034 | |
| positive regulation of reactive oxygen species biosynthetic process | GO:1903428 | 2 | 0.034 | |
| peptidyl serine modification | GO:0018209 | 83 | 0.034 | |
| glucose homeostasis | GO:0042593 | 128 | 0.033 | |
| response to peptide | GO:1901652 | 136 | 0.033 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.032 | |
| mirna catabolic process | GO:0010587 | 2 | 0.032 | |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 1 | 0.031 | |
| microtubule based process | GO:0007017 | 236 | 0.031 | |
| regulation of carbohydrate biosynthetic process | GO:0043255 | 40 | 0.030 | |
| hexose biosynthetic process | GO:0019319 | 39 | 0.030 | |
| protein oligomerization | GO:0051259 | 67 | 0.029 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.029 | |
| cellular response to carbohydrate stimulus | GO:0071322 | 50 | 0.029 | |
| cellular response to acid chemical | GO:0071229 | 68 | 0.029 | |
| cell adhesion | GO:0007155 | 329 | 0.029 | |
| positive regulation of chromosome organization | GO:2001252 | 33 | 0.029 | |
| synaptic transmission | GO:0007268 | 329 | 0.028 | |
| mapk cascade | GO:0000165 | 281 | 0.028 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.028 | |
| regulation of protein targeting to membrane | GO:0090313 | 9 | 0.027 | |
| forebrain development | GO:0030900 | 302 | 0.027 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.027 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.027 | |
| membrane organization | GO:0061024 | 245 | 0.027 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.026 | |
| regulation of peptidyl serine phosphorylation | GO:0033135 | 39 | 0.026 | |
| monocarboxylic acid metabolic process | GO:0032787 | 191 | 0.026 | |
| protein methylation | GO:0006479 | 81 | 0.026 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.026 | |
| regulation of ras protein signal transduction | GO:0046578 | 114 | 0.026 | |
| maintenance of location | GO:0051235 | 89 | 0.025 | |
| regulation of glucose metabolic process | GO:0010906 | 60 | 0.024 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.024 | |
| cellular carbohydrate metabolic process | GO:0044262 | 119 | 0.024 | |
| actin filament organization | GO:0007015 | 113 | 0.023 | |
| cellular response to lipopolysaccharide | GO:0071222 | 77 | 0.023 | |
| positive regulation of chromatin modification | GO:1903310 | 28 | 0.023 | |
| establishment of protein localization to membrane | GO:0090150 | 54 | 0.023 | |
| gluconeogenesis | GO:0006094 | 39 | 0.023 | |
| negative regulation of cellular amino acid metabolic process | GO:0045763 | 0 | 0.022 | |
| adult locomotory behavior | GO:0008344 | 91 | 0.022 | |
| cellular glucose homeostasis | GO:0001678 | 52 | 0.022 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.022 | |
| polysaccharide metabolic process | GO:0005976 | 39 | 0.022 | |
| protein o linked glycosylation | GO:0006493 | 16 | 0.022 | |
| macromolecule methylation | GO:0043414 | 120 | 0.022 | |
| protein localization to membrane | GO:0072657 | 108 | 0.021 | |
| histone h3 k4 methylation | GO:0051568 | 23 | 0.021 | |
| peptidyl lysine trimethylation | GO:0018023 | 12 | 0.021 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.021 | |
| cellular chemical homeostasis | GO:0055082 | 215 | 0.021 | |
| reactive oxygen species biosynthetic process | GO:1903409 | 8 | 0.021 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.020 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.020 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.020 | |
| regulation of protein localization | GO:0032880 | 231 | 0.020 | |
| protein alkylation | GO:0008213 | 81 | 0.020 | |
| multicellular organism growth | GO:0035264 | 161 | 0.020 | |
| peripheral nervous system neuron axonogenesis | GO:0048936 | 3 | 0.020 | |
| rna interference | GO:0016246 | 2 | 0.020 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.019 | |
| positive regulation of histone modification | GO:0031058 | 28 | 0.018 | |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.018 | |
| cellular response to insulin stimulus | GO:0032869 | 78 | 0.018 | |
| rho protein signal transduction | GO:0007266 | 32 | 0.018 | |
| mitochondrion distribution | GO:0048311 | 4 | 0.018 | |
| actin filament bundle assembly | GO:0051017 | 40 | 0.017 | |
| cellular response to biotic stimulus | GO:0071216 | 92 | 0.017 | |
| protein targeting | GO:0006605 | 143 | 0.017 | |
| lipid localization | GO:0010876 | 126 | 0.017 | |
| cellular response to glucose stimulus | GO:0071333 | 45 | 0.016 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.016 | |
| glycoprotein metabolic process | GO:0009100 | 116 | 0.016 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.016 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.016 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.016 | |
| response to peptide hormone | GO:0043434 | 127 | 0.016 | |
| negative regulation of protein phosphorylation | GO:0001933 | 126 | 0.016 | |
| histone h4 k16 acetylation | GO:0043984 | 3 | 0.015 | |
| dephosphorylation | GO:0016311 | 129 | 0.015 | |
| regulation of gluconeogenesis | GO:0006111 | 30 | 0.015 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.015 | |
| cellular response to molecule of bacterial origin | GO:0071219 | 83 | 0.015 | |
| cellular response to lipid | GO:0071396 | 145 | 0.015 | |
| peptidyl tyrosine phosphorylation | GO:0018108 | 143 | 0.015 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.015 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.015 | |
| monosaccharide biosynthetic process | GO:0046364 | 44 | 0.015 | |
| histone lysine methylation | GO:0034968 | 50 | 0.015 | |
| histone modification | GO:0016570 | 159 | 0.015 | |
| cellular response to hexose stimulus | GO:0071331 | 47 | 0.015 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.015 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.015 | |
| cation transport | GO:0006812 | 399 | 0.015 | |
| regulation of transcription from rna polymerase iii promoter | GO:0006359 | 2 | 0.015 | |
| regulation of cellular carbohydrate metabolic process | GO:0010675 | 75 | 0.015 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.014 | |
| positive regulation of reactive oxygen species metabolic process | GO:2000379 | 11 | 0.014 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.014 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.014 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.014 | |
| protein homooligomerization | GO:0051260 | 43 | 0.014 | |
| response to monosaccharide | GO:0034284 | 67 | 0.014 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.014 | |
| pyruvate metabolic process | GO:0006090 | 28 | 0.014 | |
| response to insulin | GO:0032868 | 100 | 0.014 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.014 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.013 | |
| energy reserve metabolic process | GO:0006112 | 39 | 0.013 | |
| regulation of glycolytic process | GO:0006110 | 10 | 0.013 | |
| regulation of carbohydrate catabolic process | GO:0043470 | 12 | 0.013 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.013 | |
| negative regulation of protein targeting to membrane | GO:0090315 | 1 | 0.013 | |
| glycoprotein biosynthetic process | GO:0009101 | 89 | 0.013 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 77 | 0.012 | |
| development of primary male sexual characteristics | GO:0046546 | 88 | 0.012 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.012 | |
| macromolecule glycosylation | GO:0043413 | 55 | 0.012 | |
| protein localization to organelle | GO:0033365 | 185 | 0.012 | |
| endocytosis | GO:0006897 | 168 | 0.012 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.012 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.012 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.012 | |
| cell junction organization | GO:0034330 | 77 | 0.012 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.012 | |
| inositol lipid mediated signaling | GO:0048017 | 41 | 0.012 | |
| negative regulation of cellular amine metabolic process | GO:0033239 | 1 | 0.011 | |
| translation | GO:0006412 | 93 | 0.011 | |
| positive regulation of leukocyte differentiation | GO:1902107 | 86 | 0.011 | |
| regulation of cytokine production | GO:0001817 | 266 | 0.011 | |
| generation of precursor metabolites and energy | GO:0006091 | 103 | 0.011 | |
| regulation of peptidyl threonine phosphorylation | GO:0010799 | 12 | 0.011 | |
| protein autophosphorylation | GO:0046777 | 61 | 0.011 | |
| peptidyl tyrosine modification | GO:0018212 | 145 | 0.011 | |
| muscle system process | GO:0003012 | 141 | 0.011 | |
| tissue homeostasis | GO:0001894 | 115 | 0.011 | |
| regulation of cell shape | GO:0008360 | 39 | 0.011 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.011 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.011 | |
| neuronal action potential | GO:0019228 | 54 | 0.011 | |
| erk1 and erk2 cascade | GO:0070371 | 77 | 0.011 | |
| negative regulation of protein transport | GO:0051224 | 46 | 0.011 | |
| nephric duct formation | GO:0072179 | 4 | 0.011 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.011 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.011 | |
| regulation of homeostatic process | GO:0032844 | 182 | 0.011 | |
| negative regulation of peptidyl threonine phosphorylation | GO:0010801 | 6 | 0.010 | |
| transmembrane transport | GO:0055085 | 412 | 0.010 | |
| cellular response to monosaccharide stimulus | GO:0071326 | 47 | 0.010 | |
| response to amino acid | GO:0043200 | 37 | 0.010 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.010 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.010 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.010 | |
| transcription from rna polymerase iii promoter | GO:0006383 | 3 | 0.010 | |
| germ cell development | GO:0007281 | 185 | 0.010 | |
