| dna metabolic process | GO:0006259 | 303 | 0.180 | |
| negative regulation of dna replication | GO:0008156 | 4 | 0.064 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.058 | |
| nucleotide excision repair | GO:0006289 | 13 | 0.046 | |
| organelle assembly | GO:0070925 | 177 | 0.043 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.043 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.040 | |
| dna replication | GO:0006260 | 52 | 0.035 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.035 | |
| guanosine containing compound catabolic process | GO:1901069 | 144 | 0.034 | |
| maintenance of location | GO:0051235 | 89 | 0.032 | |
| microtubule based process | GO:0007017 | 236 | 0.030 | |
| protein refolding | GO:0042026 | 1 | 0.026 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 88 | 0.022 | |
| response to transforming growth factor beta | GO:0071559 | 88 | 0.022 | |
| cell cycle checkpoint | GO:0000075 | 47 | 0.020 | |
| gpi anchor metabolic process | GO:0006505 | 7 | 0.020 | |
| neuron apoptotic process | GO:0051402 | 142 | 0.020 | |
| protein import into peroxisome matrix | GO:0016558 | 3 | 0.019 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.019 | |
| response to growth factor | GO:0070848 | 198 | 0.018 | |
| protein ubiquitination | GO:0016567 | 171 | 0.018 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.017 | |
| cellular response to growth factor stimulus | GO:0071363 | 197 | 0.017 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.017 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.017 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.016 | |
| inositol phosphate catabolic process | GO:0071545 | 4 | 0.016 | |
| peroxisomal transport | GO:0043574 | 4 | 0.016 | |
| regulation of transmembrane receptor protein serine threonine kinase signaling pathway | GO:0090092 | 112 | 0.016 | |
| protein localization to organelle | GO:0033365 | 185 | 0.016 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.015 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.015 | |
| negative regulation of immune system process | GO:0002683 | 209 | 0.014 | |
| cellular lipid catabolic process | GO:0044242 | 52 | 0.014 | |
| negative regulation of cell cycle process | GO:0010948 | 69 | 0.014 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.014 | |
| fibroblast proliferation | GO:0048144 | 35 | 0.014 | |
| membrane organization | GO:0061024 | 245 | 0.014 | |
| dephosphorylation | GO:0016311 | 129 | 0.014 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.013 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.013 | |
| chemotaxis | GO:0006935 | 247 | 0.013 | |
| camera type eye development | GO:0043010 | 266 | 0.013 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.013 | |
| negative regulation of transmembrane receptor protein serine threonine kinase signaling pathway | GO:0090101 | 61 | 0.013 | |
| lipid biosynthetic process | GO:0008610 | 179 | 0.013 | |
| phosphatidylinositol metabolic process | GO:0046488 | 45 | 0.013 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.013 | |
| intraciliary transport | GO:0042073 | 9 | 0.013 | |
| stem cell maintenance | GO:0019827 | 130 | 0.012 | |
| cerebellum development | GO:0021549 | 77 | 0.012 | |
| telencephalon development | GO:0021537 | 186 | 0.012 | |
| protein localization to membrane | GO:0072657 | 108 | 0.012 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.012 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.012 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.012 | |
| digestive system development | GO:0055123 | 200 | 0.012 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.012 | |
| protein processing | GO:0016485 | 163 | 0.012 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.011 | |
| protein maturation | GO:0051604 | 176 | 0.011 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.011 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.011 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.011 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.011 | |
| respiratory system development | GO:0060541 | 190 | 0.011 | |
| regulation of cell size | GO:0008361 | 72 | 0.011 | |
| digestive tract morphogenesis | GO:0048546 | 147 | 0.011 | |
| rho protein signal transduction | GO:0007266 | 32 | 0.011 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.011 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.010 | |
| centrosome duplication | GO:0051298 | 16 | 0.010 | |
| negative regulation of proteolysis involved in cellular protein catabolic process | GO:1903051 | 22 | 0.010 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.010 | |
| small molecule catabolic process | GO:0044282 | 71 | 0.010 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.010 | |
| protein catabolic process | GO:0030163 | 221 | 0.010 | |
| hematopoietic stem cell migration | GO:0035701 | 1 | 0.010 | |
| forebrain development | GO:0030900 | 302 | 0.010 | |
| neuron projection guidance | GO:0097485 | 141 | 0.010 | |
| retina development in camera type eye | GO:0060041 | 119 | 0.010 | |
| male gamete generation | GO:0048232 | 285 | 0.010 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.010 | |
