| chromatin organization | GO:0006325 | 206 | 0.703 | Human |
| translation | GO:0006412 | 93 | 0.601 | |
| chromatin modification | GO:0016568 | 187 | 0.262 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.254 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.234 | |
| gonad development | GO:0008406 | 141 | 0.232 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.225 | Mouse |
| oocyte construction | GO:0007308 | 2 | 0.220 | |
| transcription coupled nucleotide excision repair | GO:0006283 | 2 | 0.201 | |
| dna metabolic process | GO:0006259 | 303 | 0.183 | Human |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 1 | 0.175 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.173 | Rat |
| dna repair | GO:0006281 | 107 | 0.156 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.146 | |
| body morphogenesis | GO:0010171 | 45 | 0.146 | |
| positive regulation of rna splicing | GO:0033120 | 12 | 0.125 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.115 | |
| microtubule based process | GO:0007017 | 236 | 0.113 | |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.105 | |
| rna localization | GO:0006403 | 23 | 0.105 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.104 | |
| mrna transport | GO:0051028 | 13 | 0.100 | |
| heterochromatin organization | GO:0070828 | 4 | 0.094 | |
| nuclear transport | GO:0051169 | 139 | 0.092 | Human |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.090 | |
| oocyte differentiation | GO:0009994 | 35 | 0.089 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.088 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.082 | |
| rna transport | GO:0050658 | 18 | 0.081 | |
| nucleic acid transport | GO:0050657 | 18 | 0.077 | |
| germ cell development | GO:0007281 | 185 | 0.075 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.072 | |
| rna processing | GO:0006396 | 105 | 0.071 | |
| endocytosis | GO:0006897 | 168 | 0.071 | |
| organelle fission | GO:0048285 | 170 | 0.070 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.069 | Rat |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.067 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.067 | Human |
| positive regulation of mrna metabolic process | GO:1903313 | 17 | 0.064 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.063 | Human |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.062 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.061 | |
| cellular response to cytokine stimulus | GO:0071345 | 189 | 0.061 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.061 | |
| intracellular mrna localization | GO:0008298 | 4 | 0.060 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.060 | |
| cytoplasmic microtubule organization | GO:0031122 | 14 | 0.058 | |
| negative regulation of rna splicing | GO:0033119 | 12 | 0.058 | |
| female gamete generation | GO:0007292 | 74 | 0.058 | |
| axon guidance | GO:0007411 | 141 | 0.058 | |
| nuclear export | GO:0051168 | 34 | 0.054 | Human |
| regulation of translation | GO:0006417 | 71 | 0.054 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.053 | |
| mrna processing | GO:0006397 | 63 | 0.053 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 122 | 0.052 | |
| negative regulation of dna templated transcription termination | GO:0060567 | 1 | 0.052 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 2 | 0.052 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.051 | |
| ossification | GO:0001503 | 216 | 0.051 | |
| circulatory system process | GO:0003013 | 197 | 0.051 | |
| ribonucleoside catabolic process | GO:0042454 | 206 | 0.049 | |
| embryonic organ morphogenesis | GO:0048562 | 276 | 0.049 | |
| amine metabolic process | GO:0009308 | 45 | 0.049 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.049 | |
| positive regulation of mrna processing | GO:0050685 | 16 | 0.047 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.047 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.047 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.046 | |
| regulation of cell cycle phase transition | GO:1901987 | 77 | 0.045 | Rat |
| nuclear import | GO:0051170 | 95 | 0.045 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.045 | Rat |
| histone modification | GO:0016570 | 159 | 0.044 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.044 | |
| mrna catabolic process | GO:0006402 | 22 | 0.043 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.042 | |
| protein import into nucleus | GO:0006606 | 95 | 0.042 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.042 | |
| macromolecule methylation | GO:0043414 | 120 | 0.041 | |
| multicellular organism growth | GO:0035264 | 161 | 0.040 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.040 | |
| nucleoside catabolic process | GO:0009164 | 206 | 0.038 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.038 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.038 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.038 | |
| chromatin assembly or disassembly | GO:0006333 | 16 | 0.036 | Human |
| receptor mediated endocytosis | GO:0006898 | 51 | 0.036 | |
| intracellular protein transport | GO:0006886 | 204 | 0.035 | Human |
| regulation of ras protein signal transduction | GO:0046578 | 114 | 0.035 | |
| regulation of polyamine transmembrane transport | GO:1902267 | 5 | 0.034 | |
| oogenesis | GO:0048477 | 56 | 0.034 | |
| oxidation reduction process | GO:0055114 | 342 | 0.033 | |
| regulation of rna splicing | GO:0043484 | 37 | 0.033 | |
| dna templated transcription elongation | GO:0006354 | 13 | 0.033 | |
| protein localization to organelle | GO:0033365 | 185 | 0.032 | |
| chemotaxis | GO:0006935 | 247 | 0.032 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.032 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.032 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.032 | |
| positive regulation of nucleocytoplasmic transport | GO:0046824 | 30 | 0.032 | Human |
| hormone secretion | GO:0046879 | 128 | 0.032 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 16 | 0.030 | |
| respiratory system development | GO:0060541 | 190 | 0.030 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.029 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.029 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.029 | |
| protein targeting | GO:0006605 | 143 | 0.029 | |
| circadian rhythm | GO:0007623 | 114 | 0.029 | |
| oocyte axis specification | GO:0007309 | 2 | 0.029 | |
| pole plasm assembly | GO:0007315 | 2 | 0.029 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 94 | 0.028 | |
| methylation | GO:0032259 | 134 | 0.028 | |
| phagocytosis | GO:0006909 | 66 | 0.028 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.028 | |
| segmentation | GO:0035282 | 93 | 0.028 | |
| positive regulation of mrna splicing via spliceosome | GO:0048026 | 11 | 0.028 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.028 | Rat |
| dna modification | GO:0006304 | 50 | 0.028 | |
| blood circulation | GO:0008015 | 195 | 0.027 | |
| regulation of cellular component size | GO:0032535 | 121 | 0.027 | |
| lung development | GO:0030324 | 164 | 0.027 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.027 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.026 | |
| protein import | GO:0017038 | 101 | 0.026 | |
| leukocyte migration | GO:0050900 | 124 | 0.026 | |
| negative regulation of purine nucleotide metabolic process | GO:1900543 | 16 | 0.025 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.025 | |
| cell recognition | GO:0008037 | 83 | 0.025 | |
| positive regulation of myeloid cell differentiation | GO:0045639 | 43 | 0.025 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.025 | |
| pore complex assembly | GO:0046931 | 3 | 0.025 | |
| negative regulation of ras protein signal transduction | GO:0046580 | 18 | 0.024 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.024 | |
| regulation of nucleotide metabolic process | GO:0006140 | 169 | 0.024 | |
| single organism nuclear import | GO:1902593 | 95 | 0.024 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.024 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 169 | 0.024 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.024 | |
| double strand break repair | GO:0006302 | 48 | 0.024 | |
| rhythmic process | GO:0048511 | 174 | 0.024 | |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 12 | 0.023 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.023 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.023 | Human |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.023 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.023 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.023 | |
| negative regulation of nucleotide metabolic process | GO:0045980 | 16 | 0.022 | |
| positive regulation of growth | GO:0045927 | 104 | 0.022 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.022 | |
| forebrain development | GO:0030900 | 302 | 0.022 | |
| neuron projection guidance | GO:0097485 | 141 | 0.022 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.022 | |
| microtubule cytoskeleton organization involved in mitosis | GO:1902850 | 4 | 0.021 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.021 | Rat |
| response to inorganic substance | GO:0010035 | 96 | 0.021 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.021 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 83 | 0.021 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.021 | |
| regulation of intracellular protein transport | GO:0033157 | 82 | 0.021 | Human |
| regulation of cell projection organization | GO:0031344 | 206 | 0.021 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.021 | |
| establishment or maintenance of microtubule cytoskeleton polarity | GO:0030951 | 1 | 0.020 | |
| mesenchymal cell development | GO:0014031 | 93 | 0.020 | |
| innate immune response | GO:0045087 | 157 | 0.020 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 2 | 0.020 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.019 | |
| cellular protein complex disassembly | GO:0043624 | 36 | 0.019 | |
| organelle localization | GO:0051640 | 179 | 0.019 | |
| protein complex disassembly | GO:0043241 | 40 | 0.018 | |
| placenta development | GO:0001890 | 140 | 0.018 | |
| generation of precursor metabolites and energy | GO:0006091 | 103 | 0.018 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.018 | |
| regulation of protein kinase activity | GO:0045859 | 232 | 0.018 | |
| poly a mrna export from nucleus | GO:0016973 | 4 | 0.018 | |
| cell cell recognition | GO:0009988 | 44 | 0.018 | |
| regulation of rna stability | GO:0043487 | 26 | 0.018 | |
| dna dealkylation | GO:0035510 | 11 | 0.018 | |
| cell chemotaxis | GO:0060326 | 81 | 0.018 | |
| negative regulation of nucleotide catabolic process | GO:0030812 | 9 | 0.018 | |
| cell substrate junction assembly | GO:0007044 | 24 | 0.018 | |
| regulation of binding | GO:0051098 | 111 | 0.017 | |
| angiogenesis | GO:0001525 | 201 | 0.017 | |
| positive regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045899 | 2 | 0.017 | |
| mrna metabolic process | GO:0016071 | 84 | 0.017 | |
| response to oxidative stress | GO:0006979 | 123 | 0.017 | |
| mesenchymal cell differentiation | GO:0048762 | 107 | 0.017 | |
| cell maturation | GO:0048469 | 127 | 0.017 | |
| negative regulation of neuron apoptotic process | GO:0043524 | 92 | 0.017 | |
| genitalia development | GO:0048806 | 37 | 0.017 | |
| regulation of cell cycle g2 m phase transition | GO:1902749 | 10 | 0.016 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.016 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.016 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.016 | Human |
| regulation of protein import into nucleus | GO:0042306 | 52 | 0.016 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.016 | |
| negative regulation of translation | GO:0017148 | 22 | 0.016 | |
| developmental growth involved in morphogenesis | GO:0060560 | 138 | 0.016 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.016 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.016 | |
| diencephalon development | GO:0021536 | 63 | 0.016 | |
| protein methylation | GO:0006479 | 81 | 0.016 | |
| respiratory tube development | GO:0030323 | 167 | 0.016 | |
| neuron death | GO:0070997 | 154 | 0.016 | |
| maternal process involved in female pregnancy | GO:0060135 | 32 | 0.016 | |
| rna splicing | GO:0008380 | 54 | 0.016 | |
| sensory perception | GO:0007600 | 245 | 0.016 | |
| protein maturation | GO:0051604 | 176 | 0.015 | Human |
| nucleoside metabolic process | GO:0009116 | 246 | 0.015 | |
| cell growth | GO:0016049 | 130 | 0.015 | |
| regulation of nucleotide catabolic process | GO:0030811 | 122 | 0.015 | |
| regulation of protein complex assembly | GO:0043254 | 83 | 0.015 | |
| regulation of cell activation | GO:0050865 | 289 | 0.015 | |
| epithelial tube morphogenesis | GO:0060562 | 303 | 0.015 | |
| muscle system process | GO:0003012 | 141 | 0.015 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.015 | |
| regulation of leukocyte differentiation | GO:1902105 | 159 | 0.015 | |
| blood vessel morphogenesis | GO:0048514 | 285 | 0.015 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.015 | Rat |
| dna dependent dna replication maintenance of fidelity | GO:0045005 | 3 | 0.014 | |
| regulation of hormone secretion | GO:0046883 | 88 | 0.014 | |
| movement in environment of other organism involved in symbiotic interaction | GO:0052192 | 15 | 0.014 | |
| camera type eye development | GO:0043010 | 266 | 0.014 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.014 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.014 | |
| regulation of protein transport | GO:0051223 | 163 | 0.014 | Human |
| positive regulation of intracellular transport | GO:0032388 | 70 | 0.014 | Human |
| dna replication | GO:0006260 | 52 | 0.014 | |
| regulation of embryonic development | GO:0045995 | 71 | 0.014 | |
| regulation of protein stability | GO:0031647 | 52 | 0.014 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.014 | |
| gene silencing | GO:0016458 | 38 | 0.014 | |
| guanosine containing compound catabolic process | GO:1901069 | 144 | 0.013 | |
| cellular polysaccharide metabolic process | GO:0044264 | 38 | 0.013 | |
| regulation of nucleoside metabolic process | GO:0009118 | 130 | 0.013 | |
| maternal placenta development | GO:0001893 | 20 | 0.013 | |
| axonogenesis | GO:0007409 | 274 | 0.013 | |
| organophosphate biosynthetic process | GO:0090407 | 122 | 0.013 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.013 | |
| regulation of protein localization | GO:0032880 | 231 | 0.013 | Human |
| positive regulation of cytoplasmic transport | GO:1903651 | 40 | 0.013 | Human |
| internal peptidyl lysine acetylation | GO:0018393 | 42 | 0.013 | |
| rac protein signal transduction | GO:0016601 | 13 | 0.013 | |
| negative regulation of atpase activity | GO:0032780 | 2 | 0.013 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.013 | |
| spindle assembly involved in mitosis | GO:0090307 | 4 | 0.013 | |
| establishment of rna localization | GO:0051236 | 18 | 0.013 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.012 | |
| rna catabolic process | GO:0006401 | 29 | 0.012 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.012 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.012 | Human |
| branching morphogenesis of an epithelial tube | GO:0048754 | 159 | 0.012 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.012 | |
| nuclear division | GO:0000280 | 158 | 0.012 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.012 | |
| stem cell differentiation | GO:0048863 | 268 | 0.012 | |
| male gamete generation | GO:0048232 | 285 | 0.012 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 73 | 0.012 | Human |
| cognition | GO:0050890 | 149 | 0.012 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.012 | |
| regulation of myeloid cell differentiation | GO:0045637 | 96 | 0.012 | |
| positive regulation of nucleotide catabolic process | GO:0030813 | 88 | 0.011 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.011 | |
| regulation of circadian rhythm | GO:0042752 | 58 | 0.011 | |
| regulation of gtp catabolic process | GO:0033124 | 113 | 0.011 | |
| response to temperature stimulus | GO:0009266 | 55 | 0.011 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.011 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 4 | 0.011 | |
| protein ubiquitination | GO:0016567 | 171 | 0.011 | |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.011 | |
| germ cell proliferation | GO:0036093 | 7 | 0.011 | |
| muscle tissue development | GO:0060537 | 308 | 0.011 | |
| negative regulation of purine nucleotide catabolic process | GO:0033122 | 9 | 0.011 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.011 | |
| mesenchyme development | GO:0060485 | 152 | 0.011 | |
| lymphocyte proliferation | GO:0046651 | 164 | 0.011 | |
| learning | GO:0007612 | 98 | 0.011 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.011 | |
| positive regulation of transcription from rna polymerase i promoter | GO:0045943 | 3 | 0.011 | |
| determination of heart left right asymmetry | GO:0061371 | 48 | 0.011 | |
| mrna export from nucleus | GO:0006406 | 11 | 0.011 | |
| regulation of wnt signaling pathway | GO:0030111 | 123 | 0.011 | |
| fertilization | GO:0009566 | 127 | 0.011 | |
| positive regulation of cytoskeleton organization | GO:0051495 | 49 | 0.011 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.011 | |
| developmental cell growth | GO:0048588 | 84 | 0.011 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.011 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.011 | |
| response to heat | GO:0009408 | 27 | 0.011 | |
| dna packaging | GO:0006323 | 30 | 0.011 | Human |
| cardiac muscle contraction | GO:0060048 | 32 | 0.011 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.011 | |
| organelle assembly | GO:0070925 | 177 | 0.010 | |
| spermatogenesis | GO:0007283 | 284 | 0.010 | |
| learning or memory | GO:0007611 | 148 | 0.010 | |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.010 | |
| negative regulation of neuron death | GO:1901215 | 98 | 0.010 | |
| response to growth factor | GO:0070848 | 198 | 0.010 | |
| gland development | GO:0048732 | 330 | 0.010 | |
| purine containing compound biosynthetic process | GO:0072522 | 70 | 0.010 | |