| mrna splicing via spliceosome | GO:0000398 | 43 | 0.977 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.970 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.954 | |
| mrna processing | GO:0006397 | 63 | 0.898 | |
| rna splicing | GO:0008380 | 54 | 0.888 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.887 | |
| rna interference | GO:0016246 | 2 | 0.822 | |
| regulation of rna splicing | GO:0043484 | 37 | 0.775 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 12 | 0.771 | Mouse Fly |
| mrna catabolic process | GO:0006402 | 22 | 0.767 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 8 | 0.755 | Fly |
| mrna metabolic process | GO:0016071 | 84 | 0.701 | |
| rna processing | GO:0006396 | 105 | 0.644 | |
| negative regulation of rna splicing | GO:0033119 | 12 | 0.619 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.613 | |
| positive regulation of intracellular estrogen receptor signaling pathway | GO:0033148 | 4 | 0.612 | |
| translation | GO:0006412 | 93 | 0.602 | Fly |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.574 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.492 | Mouse Fly |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 12 | 0.489 | |
| rhythmic process | GO:0048511 | 174 | 0.388 | |
| circadian rhythm | GO:0007623 | 114 | 0.383 | |
| germ cell development | GO:0007281 | 185 | 0.363 | Worm Fly |
| rna localization | GO:0006403 | 23 | 0.359 | Human |
| rna catabolic process | GO:0006401 | 29 | 0.313 | |
| gene silencing | GO:0016458 | 38 | 0.312 | |
| gene silencing by rna | GO:0031047 | 19 | 0.274 | |
| male gamete generation | GO:0048232 | 285 | 0.257 | Fly |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.252 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.221 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.217 | |
| receptor biosynthetic process | GO:0032800 | 3 | 0.198 | |
| nuclear division | GO:0000280 | 158 | 0.196 | Fly |
| posttranscriptional gene silencing | GO:0016441 | 10 | 0.179 | |
| oocyte construction | GO:0007308 | 2 | 0.148 | |
| dna packaging | GO:0006323 | 30 | 0.145 | |
| cell adhesion | GO:0007155 | 329 | 0.140 | |
| cellular polysaccharide catabolic process | GO:0044247 | 5 | 0.136 | |
| oogenesis | GO:0048477 | 56 | 0.132 | Worm Fly |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.132 | |
| female gamete generation | GO:0007292 | 74 | 0.126 | Worm Fly |
| regulation of keratinocyte proliferation | GO:0010837 | 15 | 0.125 | |
| axonogenesis | GO:0007409 | 274 | 0.122 | |
| regulation of dna templated transcription termination | GO:0031554 | 1 | 0.117 | |
| dna templated transcription termination | GO:0006353 | 4 | 0.115 | |
| positive regulation of intracellular steroid hormone receptor signaling pathway | GO:0033145 | 4 | 0.112 | |
| spliceosomal complex assembly | GO:0000245 | 6 | 0.109 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.105 | |
| genitalia development | GO:0048806 | 37 | 0.105 | Worm |
| regulation of plasma lipoprotein particle levels | GO:0097006 | 23 | 0.103 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 2 | 0.101 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.101 | |
| stem cell development | GO:0048864 | 219 | 0.088 | Fly |
| positive regulation of mrna splicing via spliceosome | GO:0048026 | 11 | 0.088 | |
| multicellular organism growth | GO:0035264 | 161 | 0.085 | |
| intracellular mrna localization | GO:0008298 | 4 | 0.082 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.081 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.078 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.077 | |
| cell division | GO:0051301 | 120 | 0.076 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.074 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.071 | |
| oocyte development | GO:0048599 | 33 | 0.070 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.070 | Worm Fly |
| negative regulation of synapse assembly | GO:0051964 | 3 | 0.069 | |
| mesenchyme development | GO:0060485 | 152 | 0.068 | |
| negative regulation of mrna processing | GO:0050686 | 12 | 0.066 | |
| interspecies interaction between organisms | GO:0044419 | 83 | 0.063 | |
| multicellular organismal aging | GO:0010259 | 24 | 0.061 | Worm |
| regionalization | GO:0003002 | 337 | 0.060 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.060 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.059 | Human |
| nucleic acid transport | GO:0050657 | 18 | 0.057 | Human |
| myosin filament organization | GO:0031033 | 3 | 0.057 | |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 1 | 0.056 | |
| oocyte axis specification | GO:0007309 | 2 | 0.054 | |
| intracellular steroid hormone receptor signaling pathway | GO:0030518 | 29 | 0.053 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.053 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.052 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 159 | 0.052 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.050 | |
| skin development | GO:0043588 | 220 | 0.050 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.049 | |
| regulation of receptor biosynthetic process | GO:0010869 | 2 | 0.048 | |
| lipid localization | GO:0010876 | 126 | 0.048 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.047 | |
| digestive tract development | GO:0048565 | 190 | 0.047 | |
| polysaccharide catabolic process | GO:0000272 | 5 | 0.046 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.046 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.045 | |
| glycogen catabolic process | GO:0005980 | 5 | 0.045 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.045 | |
| positive regulation of receptor biosynthetic process | GO:0010870 | 1 | 0.045 | |
| dna metabolic process | GO:0006259 | 303 | 0.044 | |
| cellular response to cytokine stimulus | GO:0071345 | 189 | 0.044 | |
| positive regulation of rna splicing | GO:0033120 | 12 | 0.043 | |
| mrna localization resulting in posttranscriptional regulation of gene expression | GO:0010609 | 2 | 0.043 | |
| regulation of transcription by chromatin organization | GO:0034401 | 0 | 0.041 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.041 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.041 | |
| ossification | GO:0001503 | 216 | 0.041 | |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.040 | |
| segmentation | GO:0035282 | 93 | 0.039 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.038 | |
| adult locomotory behavior | GO:0008344 | 91 | 0.037 | |
| 3 utr mediated mrna stabilization | GO:0070935 | 2 | 0.036 | Mouse |
| maternal placenta development | GO:0001893 | 20 | 0.036 | |
| spermatogenesis | GO:0007283 | 284 | 0.035 | Fly |
| fertilization | GO:0009566 | 127 | 0.034 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.033 | |
| chemotaxis | GO:0006935 | 247 | 0.032 | |
| negative regulation of translation | GO:0017148 | 22 | 0.032 | |
| transmembrane transport | GO:0055085 | 412 | 0.032 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.031 | |
| circadian regulation of gene expression | GO:0032922 | 48 | 0.031 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.031 | Fly |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.031 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 16 | 0.030 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.030 | |
| amine metabolic process | GO:0009308 | 45 | 0.030 | |
| positive regulation of mrna metabolic process | GO:1903313 | 17 | 0.030 | |
| digestive tract morphogenesis | GO:0048546 | 147 | 0.029 | |
| skeletal muscle cell differentiation | GO:0035914 | 66 | 0.029 | |
| protein dna complex subunit organization | GO:0071824 | 28 | 0.028 | |
| positive regulation of growth | GO:0045927 | 104 | 0.027 | |
| organelle localization | GO:0051640 | 179 | 0.027 | |
| neuron projection extension | GO:1990138 | 64 | 0.027 | |
| actomyosin structure organization | GO:0031032 | 56 | 0.026 | |
| humoral immune response | GO:0006959 | 57 | 0.026 | |
| intracellular estrogen receptor signaling pathway | GO:0030520 | 11 | 0.026 | |
| regulation of rna stability | GO:0043487 | 26 | 0.025 | Mouse |
| chromatin assembly | GO:0031497 | 13 | 0.025 | |
| response to peptide | GO:1901652 | 136 | 0.024 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.024 | |
| spermatid differentiation | GO:0048515 | 115 | 0.024 | Fly |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.023 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.023 | |
| lung development | GO:0030324 | 164 | 0.023 | |
| macromolecule methylation | GO:0043414 | 120 | 0.023 | |
| female sex determination | GO:0030237 | 1 | 0.023 | |
| body morphogenesis | GO:0010171 | 45 | 0.023 | |
| chromatin organization | GO:0006325 | 206 | 0.023 | |
| establishment or maintenance of microtubule cytoskeleton polarity | GO:0030951 | 1 | 0.023 | |
| regulation of translation | GO:0006417 | 71 | 0.023 | Fly |
| gonad development | GO:0008406 | 141 | 0.023 | Worm Fly |
| negative regulation of growth | GO:0045926 | 99 | 0.022 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.022 | |
| heterochromatin assembly | GO:0031507 | 2 | 0.022 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.021 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.021 | |
| cell growth | GO:0016049 | 130 | 0.021 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 94 | 0.021 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.021 | |
| termination of rna polymerase ii transcription | GO:0006369 | 1 | 0.021 | |
| mrna splice site selection | GO:0006376 | 5 | 0.021 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.020 | |
| mesenchymal cell development | GO:0014031 | 93 | 0.020 | |
| extrinsic apoptotic signaling pathway via death domain receptors | GO:0008625 | 34 | 0.020 | |
| extrinsic apoptotic signaling pathway | GO:0097191 | 126 | 0.019 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.019 | |
| multi multicellular organism process | GO:0044706 | 109 | 0.019 | |
| glucan metabolic process | GO:0044042 | 32 | 0.019 | |
| organelle fission | GO:0048285 | 170 | 0.019 | Fly |
| negative regulation of neuron projection regeneration | GO:0070571 | 3 | 0.019 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.019 | |
| stem cell differentiation | GO:0048863 | 268 | 0.019 | Fly |
| single fertilization | GO:0007338 | 82 | 0.019 | |
| poly a mrna export from nucleus | GO:0016973 | 4 | 0.018 | |
| protein maturation | GO:0051604 | 176 | 0.018 | |
| protein methylation | GO:0006479 | 81 | 0.018 | |
| sensory perception | GO:0007600 | 245 | 0.018 | |
| muscle system process | GO:0003012 | 141 | 0.017 | |
| nuclear mrna surveillance | GO:0071028 | 1 | 0.017 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.017 | |
| macromolecular complex disassembly | GO:0032984 | 43 | 0.017 | |
| adult walking behavior | GO:0007628 | 41 | 0.017 | |
| pole plasm assembly | GO:0007315 | 2 | 0.016 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.016 | |
| regulation of cytokine production | GO:0001817 | 266 | 0.016 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.016 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.016 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.015 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.015 | |
| female sex differentiation | GO:0046660 | 84 | 0.015 | Fly |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.015 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.015 | |
| cellular polysaccharide metabolic process | GO:0044264 | 38 | 0.015 | |
| rna stabilization | GO:0043489 | 9 | 0.015 | Mouse |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.015 | |
| cellular response to lipid | GO:0071396 | 145 | 0.014 | |
| methylation | GO:0032259 | 134 | 0.014 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.014 | Human |
| positive regulation of histone methylation | GO:0031062 | 16 | 0.014 | |
| neuron projection guidance | GO:0097485 | 141 | 0.014 | |
| response to steroid hormone | GO:0048545 | 56 | 0.014 | |
| meiotic chromosome segregation | GO:0045132 | 19 | 0.014 | |
| microtubule based process | GO:0007017 | 236 | 0.014 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.014 | |
| regulation of cellular carbohydrate metabolic process | GO:0010675 | 75 | 0.014 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.013 | |
| regulation of peptidase activity | GO:0052547 | 96 | 0.013 | |
| regulation of metal ion transport | GO:0010959 | 106 | 0.013 | |
| regulation of actin filament based process | GO:0032970 | 99 | 0.013 | |
| positive regulation of erk1 and erk2 cascade | GO:0070374 | 47 | 0.013 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.013 | |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.013 | Mouse |
| response to organonitrogen compound | GO:0010243 | 246 | 0.013 | |
| positive regulation of cell cycle process | GO:0090068 | 61 | 0.013 | |
| respiratory system development | GO:0060541 | 190 | 0.013 | |
| negative regulation of nervous system development | GO:0051961 | 156 | 0.013 | |
| carboxylic acid biosynthetic process | GO:0046394 | 86 | 0.013 | |
| rna modification | GO:0009451 | 20 | 0.013 | |
| dna conformation change | GO:0071103 | 37 | 0.013 | |
| membrane organization | GO:0061024 | 245 | 0.013 | |
| positive regulation of translation | GO:0045727 | 19 | 0.013 | Fly |
| regulation of ion transport | GO:0043269 | 215 | 0.013 | |
| regulation of muscle tissue development | GO:1901861 | 97 | 0.012 | |
| positive regulation of cysteine type endopeptidase activity involved in apoptotic process | GO:0043280 | 36 | 0.012 | |
| cell maturation | GO:0048469 | 127 | 0.012 | |
| regulation of transferase activity | GO:0051338 | 263 | 0.012 | |
| lipid transport | GO:0006869 | 98 | 0.012 | |
| response to heat | GO:0009408 | 27 | 0.012 | Fly |
| adult behavior | GO:0030534 | 135 | 0.012 | |
| epithelial to mesenchymal transition | GO:0001837 | 47 | 0.012 | |
| regulation of cell activation | GO:0050865 | 289 | 0.012 | |
| regulation of epidermal cell differentiation | GO:0045604 | 21 | 0.012 | |
| regulation of transmembrane transport | GO:0034762 | 128 | 0.012 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.012 | |
| endocytosis | GO:0006897 | 168 | 0.012 | |
| regulation of endopeptidase activity | GO:0052548 | 89 | 0.012 | |
| carbohydrate homeostasis | GO:0033500 | 128 | 0.012 | |
| positive regulation of cysteine type endopeptidase activity | GO:2001056 | 39 | 0.012 | |
| oxidation reduction process | GO:0055114 | 342 | 0.011 | |
| oocyte differentiation | GO:0009994 | 35 | 0.011 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.011 | |
| germ cell proliferation | GO:0036093 | 7 | 0.011 | |
| dna repair | GO:0006281 | 107 | 0.011 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.011 | Mouse |
| regulation of vasculature development | GO:1901342 | 88 | 0.011 | |
| protein complex disassembly | GO:0043241 | 40 | 0.011 | |
| actin filament organization | GO:0007015 | 113 | 0.011 | |
| regulation of epidermis development | GO:0045682 | 33 | 0.011 | |
| negative regulation of extrinsic apoptotic signaling pathway | GO:2001237 | 45 | 0.011 | |
| chromatin modification | GO:0016568 | 187 | 0.011 | |
| positive regulation of mapk cascade | GO:0043410 | 170 | 0.011 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.011 | Fly |
| respiratory tube development | GO:0030323 | 167 | 0.011 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.011 | |
| centromere complex assembly | GO:0034508 | 3 | 0.011 | |
| polysaccharide metabolic process | GO:0005976 | 39 | 0.011 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.011 | |
| protein refolding | GO:0042026 | 1 | 0.011 | |
| regulation of cell division | GO:0051302 | 76 | 0.011 | |
| positive regulation of transferase activity | GO:0051347 | 167 | 0.011 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.011 | |
| heterochromatin organization | GO:0070828 | 4 | 0.011 | |
| regulation of interferon beta biosynthetic process | GO:0045357 | 4 | 0.011 | |
| striated muscle myosin thick filament assembly | GO:0071688 | 1 | 0.010 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.010 | Mouse |
| organelle assembly | GO:0070925 | 177 | 0.010 | |
| protein alkylation | GO:0008213 | 81 | 0.010 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.010 | |
| dna replication | GO:0006260 | 52 | 0.010 | |
