| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.208 | |
| dna metabolic process | GO:0006259 | 303 | 0.162 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.156 | |
| dna dealkylation | GO:0035510 | 11 | 0.150 | |
| organophosphate biosynthetic process | GO:0090407 | 122 | 0.143 | Human |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.138 | Human |
| nls bearing protein import into nucleus | GO:0006607 | 2 | 0.121 | |
| polyamine biosynthetic process | GO:0006596 | 2 | 0.111 | |
| regulation of protein localization | GO:0032880 | 231 | 0.104 | |
| dna repair | GO:0006281 | 107 | 0.103 | |
| organelle fission | GO:0048285 | 170 | 0.081 | |
| nuclear division | GO:0000280 | 158 | 0.081 | |
| protein desumoylation | GO:0016926 | 2 | 0.078 | |
| amine metabolic process | GO:0009308 | 45 | 0.077 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.073 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.071 | |
| nucleotide biosynthetic process | GO:0009165 | 78 | 0.070 | Human |
| response to amino acid | GO:0043200 | 37 | 0.068 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.063 | |
| ossification | GO:0001503 | 216 | 0.063 | |
| transmembrane transport | GO:0055085 | 412 | 0.062 | |
| mrna transport | GO:0051028 | 13 | 0.061 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.061 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.060 | Human |
| regulation of intracellular transport | GO:0032386 | 159 | 0.054 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.050 | |
| cellular response to amino acid stimulus | GO:0071230 | 29 | 0.049 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.048 | Human |
| cellular response to acid chemical | GO:0071229 | 68 | 0.048 | |
| regulation of establishment of protein localization | GO:0070201 | 181 | 0.047 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.047 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.047 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.046 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.045 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.045 | |
| response to acid chemical | GO:0001101 | 111 | 0.042 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.042 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.041 | Human |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.040 | |
| cellular homeostasis | GO:0019725 | 240 | 0.040 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.037 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.036 | |
| positive regulation of protein transport | GO:0051222 | 93 | 0.036 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.035 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.035 | |
| regulation of intracellular protein transport | GO:0033157 | 82 | 0.034 | |
| positive regulation of transcription from rna polymerase i promoter | GO:0045943 | 3 | 0.034 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.034 | |
| urogenital system development | GO:0001655 | 261 | 0.034 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.033 | Human |
| ion transmembrane transport | GO:0034220 | 361 | 0.033 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.033 | Human |
| folic acid containing compound metabolic process | GO:0006760 | 3 | 0.032 | |
| atp metabolic process | GO:0046034 | 75 | 0.032 | |
| protein import into nucleus | GO:0006606 | 95 | 0.032 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.031 | Human |
| regulation of protein binding | GO:0043393 | 60 | 0.031 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.031 | Human |
| mapk cascade | GO:0000165 | 281 | 0.031 | |
| regulation of protein transport | GO:0051223 | 163 | 0.031 | |
| protein targeting | GO:0006605 | 143 | 0.030 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.030 | |
| response to light stimulus | GO:0009416 | 135 | 0.029 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.029 | |
| cellular biogenic amine metabolic process | GO:0006576 | 28 | 0.029 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.029 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.028 | |
| methylation | GO:0032259 | 134 | 0.028 | |
| nuclear export | GO:0051168 | 34 | 0.028 | |
| cation transport | GO:0006812 | 399 | 0.028 | |
| protein import | GO:0017038 | 101 | 0.028 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.027 | Human |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.027 | Human |
| oxidation reduction process | GO:0055114 | 342 | 0.027 | |
| organic anion transport | GO:0015711 | 137 | 0.027 | |
| negative regulation of protein phosphorylation | GO:0001933 | 126 | 0.027 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.026 | |
| establishment of rna localization | GO:0051236 | 18 | 0.026 | |
| dna modification | GO:0006304 | 50 | 0.026 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.026 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.026 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.026 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.026 | |
| anion transport | GO:0006820 | 177 | 0.026 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.025 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.025 | |
| cellular response to cytokine stimulus | GO:0071345 | 189 | 0.024 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.024 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.024 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.024 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.024 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.024 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.024 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.024 | |
| ribonucleoside catabolic process | GO:0042454 | 206 | 0.023 | |
| ribose phosphate biosynthetic process | GO:0046390 | 59 | 0.023 | Human |
| alpha amino acid metabolic process | GO:1901605 | 59 | 0.023 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.023 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.023 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.023 | |
| metaphase plate congression | GO:0051310 | 2 | 0.022 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 73 | 0.022 | |
| transcription coupled nucleotide excision repair | GO:0006283 | 2 | 0.022 | |
| regulation of protein import into nucleus | GO:0042306 | 52 | 0.022 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.021 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.021 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.021 | Human |
| response to organic cyclic compound | GO:0014070 | 198 | 0.021 | |
| receptor mediated endocytosis | GO:0006898 | 51 | 0.021 | |
| intracellular protein transport | GO:0006886 | 204 | 0.021 | |
| tissue homeostasis | GO:0001894 | 115 | 0.020 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.020 | |
| dephosphorylation | GO:0016311 | 129 | 0.020 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.020 | |
| forebrain development | GO:0030900 | 302 | 0.020 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.020 | |
| oocyte construction | GO:0007308 | 2 | 0.020 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.020 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.019 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.019 | |
| regulation of rna stability | GO:0043487 | 26 | 0.019 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.019 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.019 | |
| methionine transport | GO:0015821 | 1 | 0.019 | |
| protein catabolic process | GO:0030163 | 221 | 0.018 | |
| maturation of ssu rrna | GO:0030490 | 1 | 0.018 | |
| coenzyme metabolic process | GO:0006732 | 52 | 0.018 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.018 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.018 | |
| regulation of cell division | GO:0051302 | 76 | 0.017 | |
| anion transmembrane transport | GO:0098656 | 71 | 0.017 | |
| positive regulation of intracellular protein transport | GO:0090316 | 42 | 0.017 | |
| kidney development | GO:0001822 | 213 | 0.017 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.017 | |
| signal transduction by p53 class mediator | GO:0072331 | 51 | 0.017 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.016 | |
| membrane organization | GO:0061024 | 245 | 0.016 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.016 | |
| translation | GO:0006412 | 93 | 0.016 | |
| developmental growth involved in morphogenesis | GO:0060560 | 138 | 0.016 | |
| regulation of circadian rhythm | GO:0042752 | 58 | 0.016 | |
| ncrna processing | GO:0034470 | 26 | 0.016 | |
| macromolecule methylation | GO:0043414 | 120 | 0.016 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.016 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.015 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.015 | |
| negative regulation of protein modification process | GO:0031400 | 163 | 0.015 | |
| blood circulation | GO:0008015 | 195 | 0.015 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.015 | |
| demethylation | GO:0070988 | 23 | 0.015 | |
| carboxylic acid transport | GO:0046942 | 100 | 0.015 | |
| transcription from rna polymerase i promoter | GO:0006360 | 13 | 0.015 | |
| cellular response to interleukin 4 | GO:0071353 | 21 | 0.015 | |
| protein localization to organelle | GO:0033365 | 185 | 0.015 | |
| neuron death | GO:0070997 | 154 | 0.015 | |
| stem cell differentiation | GO:0048863 | 268 | 0.015 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.015 | |
| purine containing compound biosynthetic process | GO:0072522 | 70 | 0.015 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.015 | |
| cell growth | GO:0016049 | 130 | 0.015 | |
| respiratory system development | GO:0060541 | 190 | 0.014 | |
| male gamete generation | GO:0048232 | 285 | 0.014 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.014 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.014 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.014 | |
| cell adhesion | GO:0007155 | 329 | 0.014 | |
| axonogenesis | GO:0007409 | 274 | 0.014 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.014 | |
| heart morphogenesis | GO:0003007 | 178 | 0.014 | |
| response to oxidative stress | GO:0006979 | 123 | 0.014 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.014 | |
| maintenance of location | GO:0051235 | 89 | 0.014 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.014 | |
| response to nutrient levels | GO:0031667 | 109 | 0.014 | |
| response to radiation | GO:0009314 | 165 | 0.014 | |
| cellular response to lipid | GO:0071396 | 145 | 0.014 | |
| endocytosis | GO:0006897 | 168 | 0.014 | |
| positive regulation of intracellular transport | GO:0032388 | 70 | 0.014 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.014 | |
| heart contraction | GO:0060047 | 93 | 0.013 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.013 | |
| regulation of body fluid levels | GO:0050878 | 162 | 0.013 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.013 | |
| organic acid transport | GO:0015849 | 101 | 0.013 | |
| neuron apoptotic process | GO:0051402 | 142 | 0.013 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.013 | |
| regulation of binding | GO:0051098 | 111 | 0.013 | |
| regulation of transmembrane transport | GO:0034762 | 128 | 0.013 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.013 | |
| glycosyl compound catabolic process | GO:1901658 | 206 | 0.013 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 169 | 0.013 | |
| i kappab kinase nf kappab signaling | GO:0007249 | 85 | 0.013 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.013 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.012 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.012 | |
| nucleoside catabolic process | GO:0009164 | 206 | 0.012 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.012 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.012 | |
| cell maturation | GO:0048469 | 127 | 0.012 | |
| reactive nitrogen species metabolic process | GO:2001057 | 0 | 0.012 | |
| sensory perception | GO:0007600 | 245 | 0.012 | |
| muscle tissue development | GO:0060537 | 308 | 0.012 | |
| divalent inorganic cation homeostasis | GO:0072507 | 138 | 0.012 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.012 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.012 | |
| locomotory behavior | GO:0007626 | 195 | 0.012 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.012 | |
| renal system development | GO:0072001 | 225 | 0.012 | |
| regulation of ion transport | GO:0043269 | 215 | 0.012 | |
| protein alkylation | GO:0008213 | 81 | 0.012 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 2 | 0.012 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.012 | |
| single organism nuclear import | GO:1902593 | 95 | 0.012 | |
| spermatogenesis | GO:0007283 | 284 | 0.011 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 85 | 0.011 | |
| sequestering of calcium ion | GO:0051208 | 18 | 0.011 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 57 | 0.011 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.011 | |
| regulation of neuron projection development | GO:0010975 | 169 | 0.011 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.011 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.011 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.011 | |
| positive regulation of nucleocytoplasmic transport | GO:0046824 | 30 | 0.011 | |
| cofactor metabolic process | GO:0051186 | 80 | 0.011 | |
| intrinsic apoptotic signaling pathway in response to dna damage | GO:0008630 | 57 | 0.011 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.011 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.011 | |
| microtubule based process | GO:0007017 | 236 | 0.011 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 114 | 0.011 | |
| nuclear import | GO:0051170 | 95 | 0.011 | |
| regulation of homeostatic process | GO:0032844 | 182 | 0.011 | |
| regulation of cellular component size | GO:0032535 | 121 | 0.011 | |
| regulation of neuron death | GO:1901214 | 134 | 0.011 | |
| heart trabecula formation | GO:0060347 | 14 | 0.011 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.011 | |
| response to uv | GO:0009411 | 44 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.011 | Human |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.011 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.011 | |
| mrna metabolic process | GO:0016071 | 84 | 0.011 | |
| regulation of peptidase activity | GO:0052547 | 96 | 0.011 | |
| branched chain amino acid transport | GO:0015803 | 2 | 0.011 | |
| regulation of neuron differentiation | GO:0045664 | 281 | 0.011 | |
| mrna export from nucleus | GO:0006406 | 11 | 0.011 | |
| engulfment of apoptotic cell | GO:0043652 | 3 | 0.011 | |
| actin filament organization | GO:0007015 | 113 | 0.011 | |
| positive regulation of cytoskeleton organization | GO:0051495 | 49 | 0.011 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.010 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 114 | 0.010 | |
| negative regulation of neuron death | GO:1901215 | 98 | 0.010 | |
| response to inorganic substance | GO:0010035 | 96 | 0.010 | |
| glucose homeostasis | GO:0042593 | 128 | 0.010 | |
| gland development | GO:0048732 | 330 | 0.010 | |
| polyamine metabolic process | GO:0006595 | 5 | 0.010 | |
| carbohydrate homeostasis | GO:0033500 | 128 | 0.010 | |
| protein ubiquitination | GO:0016567 | 171 | 0.010 | |
| leukocyte proliferation | GO:0070661 | 172 | 0.010 | Human |
| atp catabolic process | GO:0006200 | 55 | 0.010 | |
| mesenchymal cell differentiation | GO:0048762 | 107 | 0.010 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.010 | |
| regulation of map kinase activity | GO:0043405 | 120 | 0.010 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 157 | 0.010 | |
| circulatory system process | GO:0003013 | 197 | 0.010 | |