| mrna processing | GO:0006397 | 63 | 0.698 | Fly |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.506 | |
| rna splicing | GO:0008380 | 54 | 0.475 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.410 | |
| regulation of rna splicing | GO:0043484 | 37 | 0.394 | |
| rna processing | GO:0006396 | 105 | 0.345 | Fly |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.298 | |
| mrna metabolic process | GO:0016071 | 84 | 0.290 | Fly |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.231 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.179 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.175 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 12 | 0.164 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 83 | 0.128 | |
| viral process | GO:0016032 | 41 | 0.117 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.111 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.099 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.087 | |
| nucleic acid transport | GO:0050657 | 18 | 0.078 | |
| interspecies interaction between organisms | GO:0044419 | 83 | 0.075 | |
| spliceosomal complex assembly | GO:0000245 | 6 | 0.074 | |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 1 | 0.069 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.067 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.065 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.062 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.060 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.056 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.054 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.053 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.045 | |
| primary mirna processing | GO:0031053 | 1 | 0.045 | |
| hexose biosynthetic process | GO:0019319 | 39 | 0.043 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.043 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.043 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.043 | |
| transcription from rna polymerase iii promoter | GO:0006383 | 3 | 0.042 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.041 | |
| germ cell development | GO:0007281 | 185 | 0.041 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.041 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 8 | 0.040 | |
| peptidyl serine modification | GO:0018209 | 83 | 0.037 | |
| regulation of transcription from rna polymerase iii promoter | GO:0006359 | 2 | 0.037 | |
| peptidyl tyrosine phosphorylation | GO:0018108 | 143 | 0.036 | |
| peptidyl tyrosine modification | GO:0018212 | 145 | 0.035 | |
| cell division | GO:0051301 | 120 | 0.035 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.034 | |
| microtubule based process | GO:0007017 | 236 | 0.033 | |
| dna repair | GO:0006281 | 107 | 0.033 | |
| negative regulation of cellular carbohydrate metabolic process | GO:0010677 | 19 | 0.033 | |
| organelle fission | GO:0048285 | 170 | 0.032 | |
| negative regulation of multi organism process | GO:0043901 | 68 | 0.031 | |
| monosaccharide metabolic process | GO:0005996 | 106 | 0.031 | |
| cation transport | GO:0006812 | 399 | 0.031 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.031 | |
| regulation of anatomical structure size | GO:0090066 | 178 | 0.030 | |
| glucose metabolic process | GO:0006006 | 92 | 0.030 | |
| gene silencing by rna | GO:0031047 | 19 | 0.030 | |
| rna 3 end processing | GO:0031123 | 20 | 0.028 | Fly |
| protein refolding | GO:0042026 | 1 | 0.028 | |
| muscle tissue development | GO:0060537 | 308 | 0.028 | |
| viral life cycle | GO:0019058 | 36 | 0.028 | |
| regulation of homeostatic process | GO:0032844 | 182 | 0.028 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.027 | |
| regulation of carbohydrate biosynthetic process | GO:0043255 | 40 | 0.027 | |
| positive regulation of hydrolase activity | GO:0051345 | 148 | 0.027 | |
| microtubule nucleation | GO:0007020 | 2 | 0.027 | |
| regulation of cellular component size | GO:0032535 | 121 | 0.027 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.027 | |
| positive regulation of viral entry into host cell | GO:0046598 | 3 | 0.026 | |
| transmembrane transport | GO:0055085 | 412 | 0.025 | |
| segmentation | GO:0035282 | 93 | 0.025 | |
| cellular carbohydrate metabolic process | GO:0044262 | 119 | 0.025 | |
| negative regulation of protein modification process | GO:0031400 | 163 | 0.024 | |
| gluconeogenesis | GO:0006094 | 39 | 0.024 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.024 | |
| multicellular organism growth | GO:0035264 | 161 | 0.024 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.024 | |
| entry into cell of other organism involved in symbiotic interaction | GO:0051806 | 15 | 0.024 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.023 | |
| negative regulation of nlrp3 inflammasome complex assembly | GO:1900226 | 2 | 0.023 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.023 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.023 | |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.023 | |
| chromatin modification | GO:0016568 | 187 | 0.023 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.022 | |
| rna localization | GO:0006403 | 23 | 0.022 | |
| negative regulation of cytokine production | GO:0001818 | 84 | 0.022 | |
| response to acid chemical | GO:0001101 | 111 | 0.021 | |
| regulation of symbiosis encompassing mutualism through parasitism | GO:0043903 | 52 | 0.021 | |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 12 | 0.021 | |
| peptidyl serine phosphorylation | GO:0018105 | 74 | 0.021 | |
| regulation of cytokine production | GO:0001817 | 266 | 0.021 | |
| endocytosis | GO:0006897 | 168 | 0.021 | |
| dna metabolic process | GO:0006259 | 303 | 0.021 | |
| regulation of nlrp3 inflammasome complex assembly | GO:1900225 | 4 | 0.021 | |
| positive regulation of growth | GO:0045927 | 104 | 0.020 | |
| protein complex disassembly | GO:0043241 | 40 | 0.020 | |
| hexose metabolic process | GO:0019318 | 98 | 0.020 | |
| cytokine production | GO:0001816 | 319 | 0.020 | |
| mapk cascade | GO:0000165 | 281 | 0.020 | |
| negative regulation of keratinocyte differentiation | GO:0045617 | 4 | 0.020 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.019 | |
| ossification | GO:0001503 | 216 | 0.019 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 114 | 0.019 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.019 | |
| nuclear division | GO:0000280 | 158 | 0.019 | |
| regionalization | GO:0003002 | 337 | 0.019 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.019 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.019 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.018 | |
| regulation of cell division | GO:0051302 | 76 | 0.018 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.018 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.018 | |
| regulation of organ morphogenesis | GO:2000027 | 144 | 0.018 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.018 | |
| myosin filament organization | GO:0031033 | 3 | 0.018 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.018 | |
| negative regulation of viral process | GO:0048525 | 23 | 0.018 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.017 | |
| negative regulation of gluconeogenesis | GO:0045721 | 9 | 0.017 | |
| rna interference | GO:0016246 | 2 | 0.017 | |
| regulation of cell size | GO:0008361 | 72 | 0.017 | |
| mrna transport | GO:0051028 | 13 | 0.017 | |
| myeloid cell homeostasis | GO:0002262 | 114 | 0.017 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.017 | |
| negative regulation of carbohydrate metabolic process | GO:0045912 | 19 | 0.017 | |
| cellular homeostasis | GO:0019725 | 240 | 0.017 | |
| gonad development | GO:0008406 | 141 | 0.017 | |
| negative regulation of viral transcription | GO:0032897 | 3 | 0.017 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.017 | |
| carbohydrate biosynthetic process | GO:0016051 | 74 | 0.017 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.016 | |
| regulation of neuron differentiation | GO:0045664 | 281 | 0.016 | |
| regulation of gluconeogenesis | GO:0006111 | 30 | 0.016 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.016 | |
| methylation | GO:0032259 | 134 | 0.016 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.016 | |
| positive regulation of cell development | GO:0010720 | 237 | 0.016 | |
| camera type eye development | GO:0043010 | 266 | 0.016 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 114 | 0.016 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.016 | |
| ncrna 3 end processing | GO:0043628 | 2 | 0.016 | |
| negative regulation of cellular amino acid metabolic process | GO:0045763 | 0 | 0.016 | |
| amine metabolic process | GO:0009308 | 45 | 0.016 | |
| organelle assembly | GO:0070925 | 177 | 0.016 | |
| rna transport | GO:0050658 | 18 | 0.016 | |
| skeletal system morphogenesis | GO:0048705 | 203 | 0.016 | |
| appendage development | GO:0048736 | 166 | 0.016 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 157 | 0.016 | |
| myosin filament assembly | GO:0031034 | 2 | 0.015 | |
| regulation of cell activation | GO:0050865 | 289 | 0.015 | |
| t cell activation | GO:0042110 | 289 | 0.015 | |
| protein autophosphorylation | GO:0046777 | 61 | 0.015 | |
| spermatogenesis | GO:0007283 | 284 | 0.015 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.015 | |
| establishment of rna localization | GO:0051236 | 18 | 0.015 | |
| peptidyl threonine phosphorylation | GO:0018107 | 31 | 0.015 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.014 | |
| defense response to other organism | GO:0098542 | 197 | 0.014 | |
| actin filament organization | GO:0007015 | 113 | 0.014 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.014 | |
| viral gene expression | GO:0019080 | 3 | 0.014 | |
| mitotic chromosome condensation | GO:0007076 | 1 | 0.014 | |
| respiratory tube development | GO:0030323 | 167 | 0.014 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.014 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.014 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.014 | |
| response to insulin | GO:0032868 | 100 | 0.014 | |
| intracellular transport of virus | GO:0075733 | 1 | 0.014 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.014 | |
| peripheral nervous system neuron axonogenesis | GO:0048936 | 3 | 0.014 | |
| response to nutrient levels | GO:0031667 | 109 | 0.014 | |
| immune effector process | GO:0002252 | 321 | 0.014 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.014 | |
| cellular chemical homeostasis | GO:0055082 | 215 | 0.014 | |
| transcription coupled nucleotide excision repair | GO:0006283 | 2 | 0.014 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 106 | 0.014 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.014 | |
| ncrna processing | GO:0034470 | 26 | 0.014 | |
| oxidation reduction process | GO:0055114 | 342 | 0.014 | |
| gene silencing | GO:0016458 | 38 | 0.014 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.013 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.013 | |
| entry into host | GO:0044409 | 15 | 0.013 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.013 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.013 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.013 | |
| ear development | GO:0043583 | 200 | 0.013 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.013 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.013 | |
| regulation of chromosome organization | GO:0033044 | 83 | 0.013 | |
| protein localization to organelle | GO:0033365 | 185 | 0.013 | |
| internal protein amino acid acetylation | GO:0006475 | 42 | 0.013 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.013 | |
| nuclear export | GO:0051168 | 34 | 0.013 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.013 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 91 | 0.013 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.013 | |
| regulation of actin nucleation | GO:0051125 | 4 | 0.013 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 85 | 0.013 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.013 | |
| chromatin organization | GO:0006325 | 206 | 0.012 | |
| protein depolymerization | GO:0051261 | 34 | 0.012 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 80 | 0.012 | |
| adult locomotory behavior | GO:0008344 | 91 | 0.012 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.012 | |
| nuclear transport | GO:0051169 | 139 | 0.012 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.012 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.012 | |
| dna recombination | GO:0006310 | 92 | 0.012 | |
| male gamete generation | GO:0048232 | 285 | 0.012 | |
| organelle localization | GO:0051640 | 179 | 0.012 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 2 | 0.012 | |
| neuron death | GO:0070997 | 154 | 0.012 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.012 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.012 | |
| cytokine metabolic process | GO:0042107 | 71 | 0.012 | |
| striated muscle myosin thick filament assembly | GO:0071688 | 1 | 0.012 | |
| immune response regulating signaling pathway | GO:0002764 | 125 | 0.012 | |
| intracellular protein transport | GO:0006886 | 204 | 0.011 | |
| mrna catabolic process | GO:0006402 | 22 | 0.011 | |
| b cell activation | GO:0042113 | 161 | 0.011 | |
| skin development | GO:0043588 | 220 | 0.011 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.011 | |
| response to oxidative stress | GO:0006979 | 123 | 0.011 | |
| interaction with host | GO:0051701 | 22 | 0.011 | |
| positive regulation of cell activation | GO:0050867 | 158 | 0.011 | |
| regulation of protein localization | GO:0032880 | 231 | 0.011 | |
| regulation of t cell activation | GO:0050863 | 170 | 0.011 | |
| positive regulation of gtp catabolic process | GO:0033126 | 85 | 0.011 | |
| sequestering of calcium ion | GO:0051208 | 18 | 0.011 | |
| negative regulation of growth | GO:0045926 | 99 | 0.011 | |
| respiratory system development | GO:0060541 | 190 | 0.011 | |
| regulation of histone modification | GO:0031056 | 56 | 0.011 | |
| regulation of protein kinase activity | GO:0045859 | 232 | 0.011 | |
| lung development | GO:0030324 | 164 | 0.011 | |
| innate immune response | GO:0045087 | 157 | 0.011 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 159 | 0.011 | |
| skeletal muscle organ development | GO:0060538 | 163 | 0.011 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.011 | |
| sa node cell to atrial cardiac muscle cell signalling | GO:0086018 | 4 | 0.011 | |
| cell growth | GO:0016049 | 130 | 0.011 | |
| somatic diversification of immune receptors | GO:0002200 | 53 | 0.011 | |
| sequestering of metal ion | GO:0051238 | 19 | 0.011 | |
| negative regulation of mrna metabolic process | GO:1903312 | 13 | 0.011 | |
| gland development | GO:0048732 | 330 | 0.011 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.010 | |
| negative regulation of rna splicing | GO:0033119 | 12 | 0.010 | |
| protein polymerization | GO:0051258 | 57 | 0.010 | |
| cell adhesion | GO:0007155 | 329 | 0.010 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.010 | |
| epidermis development | GO:0008544 | 187 | 0.010 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.010 | |
| stem cell differentiation | GO:0048863 | 268 | 0.010 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.010 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.010 | |
| positive regulation of intracellular estrogen receptor signaling pathway | GO:0033148 | 4 | 0.010 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.010 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.010 | |
| inflammatory response | GO:0006954 | 244 | 0.010 | |
| regulation of ossification | GO:0030278 | 112 | 0.010 | |
| regulation of map kinase activity | GO:0043405 | 120 | 0.010 | |
| regulation of metal ion transport | GO:0010959 | 106 | 0.010 | |
| regulation of muscle tissue development | GO:1901861 | 97 | 0.010 | |
| lung morphogenesis | GO:0060425 | 50 | 0.010 | |
| regulation of protein complex assembly | GO:0043254 | 83 | 0.010 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.010 | |
| cation homeostasis | GO:0055080 | 212 | 0.010 | |
| macromolecule methylation | GO:0043414 | 120 | 0.010 | |
