| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.966 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.953 | |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.933 | |
| mrna processing | GO:0006397 | 63 | 0.874 | |
| rna splicing | GO:0008380 | 54 | 0.757 | |
| mrna metabolic process | GO:0016071 | 84 | 0.670 | |
| dna templated transcription termination | GO:0006353 | 4 | 0.544 | |
| rna processing | GO:0006396 | 105 | 0.518 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.456 | |
| peptidyl arginine omega n methylation | GO:0035247 | 2 | 0.366 | |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.333 | |
| pole plasm assembly | GO:0007315 | 2 | 0.303 | |
| spermatid differentiation | GO:0048515 | 115 | 0.275 | |
| regulation of response to dna damage stimulus | GO:2001020 | 34 | 0.274 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.252 | |
| intracellular mrna localization | GO:0008298 | 4 | 0.244 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.244 | |
| spermatogenesis | GO:0007283 | 284 | 0.242 | |
| germ cell development | GO:0007281 | 185 | 0.234 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.207 | |
| spermatid development | GO:0007286 | 108 | 0.206 | |
| negative regulation of protein complex disassembly | GO:0043242 | 22 | 0.204 | |
| male gamete generation | GO:0048232 | 285 | 0.202 | |
| protein complex disassembly | GO:0043241 | 40 | 0.187 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.161 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.160 | |
| regionalization | GO:0003002 | 337 | 0.150 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 2 | 0.143 | |
| segmentation | GO:0035282 | 93 | 0.143 | |
| rna localization | GO:0006403 | 23 | 0.139 | |
| negative regulation of dna templated transcription termination | GO:0060567 | 1 | 0.138 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.135 | |
| oocyte axis specification | GO:0007309 | 2 | 0.128 | |
| oocyte construction | GO:0007308 | 2 | 0.128 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.123 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.112 | |
| cell division | GO:0051301 | 120 | 0.104 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.100 | |
| poly a mrna export from nucleus | GO:0016973 | 4 | 0.098 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 12 | 0.092 | |
| female gamete generation | GO:0007292 | 74 | 0.089 | |
| positive regulation of rna splicing | GO:0033120 | 12 | 0.087 | |
| signal transduction by p53 class mediator | GO:0072331 | 51 | 0.087 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.086 | |
| dna damage response signal transduction by p53 class mediator | GO:0030330 | 19 | 0.083 | |
| macromolecule methylation | GO:0043414 | 120 | 0.081 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.079 | |
| intracellular receptor signaling pathway | GO:0030522 | 74 | 0.078 | |
| snorna metabolic process | GO:0016074 | 1 | 0.073 | |
| methylation | GO:0032259 | 134 | 0.070 | |
| nucleic acid transport | GO:0050657 | 18 | 0.070 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.070 | |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.070 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.065 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.063 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.063 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.060 | |
| oogenesis | GO:0048477 | 56 | 0.060 | |
| positive regulation of mrna splicing via spliceosome | GO:0048026 | 11 | 0.059 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.058 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.056 | |
| termination of rna polymerase ii transcription | GO:0006369 | 1 | 0.056 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.055 | |
| protein methylation | GO:0006479 | 81 | 0.055 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.055 | |
| nuclear transport | GO:0051169 | 139 | 0.054 | |
| regulation of cell cycle phase transition | GO:1901987 | 77 | 0.054 | |
| mrna transport | GO:0051028 | 13 | 0.053 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.052 | |
| oocyte development | GO:0048599 | 33 | 0.052 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.052 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.050 | |
| intracellular steroid hormone receptor signaling pathway | GO:0030518 | 29 | 0.047 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 8 | 0.047 | |
| endomembrane system organization | GO:0010256 | 147 | 0.047 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.046 | |
| mrna export from nucleus | GO:0006406 | 11 | 0.046 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.045 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.044 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.043 | |
| spliceosomal complex assembly | GO:0000245 | 6 | 0.043 | |
| nuclear division | GO:0000280 | 158 | 0.043 | |
| adult behavior | GO:0030534 | 135 | 0.042 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.042 | |
| adult locomotory behavior | GO:0008344 | 91 | 0.041 | |
| regulation of dna templated transcription termination | GO:0031554 | 1 | 0.040 | |
| regulation of translation | GO:0006417 | 71 | 0.039 | |
| chromatin organization | GO:0006325 | 206 | 0.038 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.037 | |
| positive regulation of mrna processing | GO:0050685 | 16 | 0.037 | |
| 3 utr mediated mrna stabilization | GO:0070935 | 2 | 0.037 | |
| establishment of rna localization | GO:0051236 | 18 | 0.037 | |
| regulation of rna splicing | GO:0043484 | 37 | 0.037 | |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 1 | 0.036 | |
| regulation of rna stability | GO:0043487 | 26 | 0.035 | |
| regulation of binding | GO:0051098 | 111 | 0.034 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.034 | |
| rna stabilization | GO:0043489 | 9 | 0.033 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.033 | |
| negative regulation of dna damage response signal transduction by p53 class mediator | GO:0043518 | 5 | 0.032 | |
| ossification | GO:0001503 | 216 | 0.032 | |
| rna transport | GO:0050658 | 18 | 0.032 | |
| gonad development | GO:0008406 | 141 | 0.032 | |
| rna interference | GO:0016246 | 2 | 0.032 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.032 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.031 | |
| cell maturation | GO:0048469 | 127 | 0.031 | |
| positive regulation of mrna metabolic process | GO:1903313 | 17 | 0.031 | |
| negative regulation of synapse assembly | GO:0051964 | 3 | 0.030 | |
| cellularization | GO:0007349 | 1 | 0.030 | |
| protein alkylation | GO:0008213 | 81 | 0.029 | |
| histone modification | GO:0016570 | 159 | 0.029 | |
| response to heat | GO:0009408 | 27 | 0.029 | |
| nucleotide excision repair | GO:0006289 | 13 | 0.029 | |
| primary mirna processing | GO:0031053 | 1 | 0.028 | |
| developmental maturation | GO:0021700 | 193 | 0.027 | |
| microtubule polymerization or depolymerization | GO:0031109 | 26 | 0.027 | |
| striated muscle myosin thick filament assembly | GO:0071688 | 1 | 0.027 | |
| metaphase plate congression | GO:0051310 | 2 | 0.027 | |
| axonogenesis | GO:0007409 | 274 | 0.026 | |
| amine metabolic process | GO:0009308 | 45 | 0.026 | |
| negative regulation of rna splicing | GO:0033119 | 12 | 0.026 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.025 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.025 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.025 | |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 12 | 0.025 | |
| synapse organization | GO:0050808 | 125 | 0.025 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.025 | |
| regulation of symbiosis encompassing mutualism through parasitism | GO:0043903 | 52 | 0.025 | |
| molting cycle | GO:0042303 | 90 | 0.024 | |
| multicellular organism growth | GO:0035264 | 161 | 0.024 | |
| organelle fission | GO:0048285 | 170 | 0.024 | |
| regulation of cell division | GO:0051302 | 76 | 0.024 | |
| intrinsic apoptotic signaling pathway in response to dna damage | GO:0008630 | 57 | 0.024 | |
| macromolecular complex disassembly | GO:0032984 | 43 | 0.024 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.023 | |
| negative regulation of nervous system development | GO:0051961 | 156 | 0.023 | |
| regulation of chromosome organization | GO:0033044 | 83 | 0.023 | |
| viral life cycle | GO:0019058 | 36 | 0.023 | |
| interspecies interaction between organisms | GO:0044419 | 83 | 0.022 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.021 | |
| blastoderm segmentation | GO:0007350 | 13 | 0.021 | |
| peptidyl arginine modification | GO:0018195 | 8 | 0.021 | |
| nucleus organization | GO:0006997 | 45 | 0.020 | |
| regulation of synapse assembly | GO:0051963 | 29 | 0.020 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.020 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.020 | |
| respiratory system development | GO:0060541 | 190 | 0.020 | |
| regulation of chromosome segregation | GO:0051983 | 21 | 0.019 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.019 | |
| oocyte differentiation | GO:0009994 | 35 | 0.019 | |
| lung development | GO:0030324 | 164 | 0.019 | |
| single fertilization | GO:0007338 | 82 | 0.019 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 48 | 0.018 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.018 | |
| mechanosensory behavior | GO:0007638 | 6 | 0.018 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 57 | 0.018 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.018 | |
| developmental cell growth | GO:0048588 | 84 | 0.018 | |
| mitotic sister chromatid segregation | GO:0000070 | 14 | 0.017 | |
| mitotic sister chromatid separation | GO:0051306 | 9 | 0.017 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.017 | |
| regulation of protein localization | GO:0032880 | 231 | 0.017 | |
| neuron projection extension | GO:1990138 | 64 | 0.017 | |
| stem cell differentiation | GO:0048863 | 268 | 0.017 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.016 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.016 | |
| regulation of cellular protein catabolic process | GO:1903362 | 61 | 0.016 | |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.016 | |
| histone methylation | GO:0016571 | 71 | 0.016 | |
| protein ubiquitination | GO:0016567 | 171 | 0.016 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.016 | |
| negative regulation of response to dna damage stimulus | GO:2001021 | 10 | 0.015 | |
| myosin filament organization | GO:0031033 | 3 | 0.015 | |
| organelle localization | GO:0051640 | 179 | 0.015 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.015 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.015 | |
| genitalia development | GO:0048806 | 37 | 0.015 | |
| positive regulation of cell development | GO:0010720 | 237 | 0.015 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.015 | |
| lipid biosynthetic process | GO:0008610 | 179 | 0.015 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.014 | |
| positive regulation of mapk cascade | GO:0043410 | 170 | 0.014 | |
| nuclear mrna surveillance | GO:0071028 | 1 | 0.014 | |
| respiratory tube development | GO:0030323 | 167 | 0.014 | |
| urogenital system development | GO:0001655 | 261 | 0.014 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 106 | 0.014 | |
| digestive system development | GO:0055123 | 200 | 0.014 | |
| neural crest cell fate commitment | GO:0014034 | 1 | 0.014 | |
| mrna stabilization | GO:0048255 | 9 | 0.014 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 45 | 0.013 | |
| negative regulation of mrna metabolic process | GO:1903312 | 13 | 0.013 | |
| cell fate commitment | GO:0045165 | 210 | 0.013 | |
| nuclear export | GO:0051168 | 34 | 0.013 | |
| gene silencing | GO:0016458 | 38 | 0.013 | |
| sensory perception | GO:0007600 | 245 | 0.013 | |
| intracellular protein transport | GO:0006886 | 204 | 0.013 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.013 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.013 | |
| regulation of reproductive process | GO:2000241 | 66 | 0.013 | |
| regulation of dna templated transcription elongation | GO:0032784 | 10 | 0.013 | |
| fertilization | GO:0009566 | 127 | 0.013 | |
| regulation of mitosis | GO:0007088 | 29 | 0.013 | |
| muscle tissue development | GO:0060537 | 308 | 0.013 | |
| histone arginine methylation | GO:0034969 | 5 | 0.013 | |
| microtubule nucleation | GO:0007020 | 2 | 0.013 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.012 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.012 | |
| modification dependent protein catabolic process | GO:0019941 | 133 | 0.012 | |
| cerebral cortex development | GO:0021987 | 86 | 0.012 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.012 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.012 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 2 | 0.012 | |
| circadian rhythm | GO:0007623 | 114 | 0.012 | |
| negative regulation of mrna processing | GO:0050686 | 12 | 0.012 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.012 | |
| dna repair | GO:0006281 | 107 | 0.012 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.012 | |
| endocytosis | GO:0006897 | 168 | 0.012 | |
| regulation of protein transport | GO:0051223 | 163 | 0.011 | |
| response to radiation | GO:0009314 | 165 | 0.011 | |
| microtubule based process | GO:0007017 | 236 | 0.011 | |
| metaphase anaphase transition of mitotic cell cycle | GO:0007091 | 9 | 0.011 | |
| compound eye development | GO:0048749 | 1 | 0.011 | |
| fatty acid metabolic process | GO:0006631 | 121 | 0.011 | |
| cellular polysaccharide metabolic process | GO:0044264 | 38 | 0.011 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.011 | |
| synapse assembly | GO:0007416 | 56 | 0.011 | |
| cellular response to cytokine stimulus | GO:0071345 | 189 | 0.011 | |
| forebrain development | GO:0030900 | 302 | 0.011 | |
| cytoplasm organization | GO:0007028 | 8 | 0.011 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.011 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.011 | |
| signal transduction in response to dna damage | GO:0042770 | 21 | 0.011 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.011 | |
| cellular protein complex disassembly | GO:0043624 | 36 | 0.011 | |
| glucan metabolic process | GO:0044042 | 32 | 0.011 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 80 | 0.011 | |
| negative regulation of hematopoietic progenitor cell differentiation | GO:1901533 | 4 | 0.010 | |
| alcohol metabolic process | GO:0006066 | 116 | 0.010 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 56 | 0.010 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.010 | |
| response to temperature stimulus | GO:0009266 | 55 | 0.010 | |
