| positive regulation of mitochondrion organization | GO:0010822 | 17 | 0.147 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.124 | |
| rna processing | GO:0006396 | 105 | 0.120 | |
| mrna metabolic process | GO:0016071 | 84 | 0.097 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.094 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.082 | |
| macromolecule methylation | GO:0043414 | 120 | 0.071 | |
| establishment of rna localization | GO:0051236 | 18 | 0.069 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.066 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.065 | |
| oocyte construction | GO:0007308 | 2 | 0.064 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.064 | |
| intracellular mrna localization | GO:0008298 | 4 | 0.055 | |
| pole plasm assembly | GO:0007315 | 2 | 0.049 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.047 | |
| nucleic acid transport | GO:0050657 | 18 | 0.042 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.042 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.038 | |
| mrna catabolic process | GO:0006402 | 22 | 0.037 | |
| cation transport | GO:0006812 | 399 | 0.035 | |
| amine metabolic process | GO:0009308 | 45 | 0.035 | |
| female gamete generation | GO:0007292 | 74 | 0.034 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.033 | |
| transmembrane transport | GO:0055085 | 412 | 0.032 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.032 | |
| organophosphate biosynthetic process | GO:0090407 | 122 | 0.031 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.030 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.029 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.029 | |
| methylation | GO:0032259 | 134 | 0.029 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.028 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.028 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.028 | |
| cellular homeostasis | GO:0019725 | 240 | 0.027 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.027 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.027 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.027 | |
| germ cell development | GO:0007281 | 185 | 0.026 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 16 | 0.026 | |
| regulation of ras protein signal transduction | GO:0046578 | 114 | 0.026 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.025 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.025 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.025 | |
| regulation of ion transport | GO:0043269 | 215 | 0.024 | |
| muscle tissue development | GO:0060537 | 308 | 0.024 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.023 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.023 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.023 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.022 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.022 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.022 | |
| segmentation | GO:0035282 | 93 | 0.022 | |
| atp metabolic process | GO:0046034 | 75 | 0.021 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.021 | |
| ncrna processing | GO:0034470 | 26 | 0.020 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.020 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.019 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.019 | |
| nucleolus organization | GO:0007000 | 5 | 0.019 | |
| microtubule based process | GO:0007017 | 236 | 0.019 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.018 | |
| striated muscle cell development | GO:0055002 | 125 | 0.018 | |
| regulation of homeostatic process | GO:0032844 | 182 | 0.018 | |
| rna catabolic process | GO:0006401 | 29 | 0.017 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.016 | |
| spermatogenesis | GO:0007283 | 284 | 0.016 | |
| oocyte axis specification | GO:0007309 | 2 | 0.016 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.016 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 83 | 0.016 | |
| negative regulation of protein modification process | GO:0031400 | 163 | 0.016 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.016 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.016 | |
| muscle cell development | GO:0055001 | 133 | 0.016 | |
| sensory perception | GO:0007600 | 245 | 0.016 | |
| mapk cascade | GO:0000165 | 281 | 0.016 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.016 | |
| divalent inorganic cation homeostasis | GO:0072507 | 138 | 0.015 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.015 | |
| response to acid chemical | GO:0001101 | 111 | 0.015 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.015 | |
| regulation of mitochondrion organization | GO:0010821 | 27 | 0.015 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.015 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.014 | |
| immune response activating cell surface receptor signaling pathway | GO:0002429 | 72 | 0.014 | |
| cell maturation | GO:0048469 | 127 | 0.014 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.014 | |
| regulation of erk1 and erk2 cascade | GO:0070372 | 71 | 0.014 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 2 | 0.014 | |
| purine nucleotide biosynthetic process | GO:0006164 | 65 | 0.014 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.014 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.014 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.014 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.014 | |
| nuclear transport | GO:0051169 | 139 | 0.013 | |
| maturation of ssu rrna | GO:0030490 | 1 | 0.013 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.013 | |
| neuron death | GO:0070997 | 154 | 0.013 | |
| regulation of nucleoside metabolic process | GO:0009118 | 130 | 0.013 | |
| t cell activation | GO:0042110 | 289 | 0.013 | |
| organelle assembly | GO:0070925 | 177 | 0.013 | |
| stem cell differentiation | GO:0048863 | 268 | 0.013 | |
| mitochondrial membrane organization | GO:0007006 | 26 | 0.012 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.012 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.012 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.012 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.012 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.012 | |
| cellular ion homeostasis | GO:0006873 | 165 | 0.012 | |
| nucleoside biosynthetic process | GO:0009163 | 21 | 0.012 | |
| calcium ion transport | GO:0006816 | 159 | 0.012 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.012 | |
| rna splicing | GO:0008380 | 54 | 0.012 | |
| regulation of neuron differentiation | GO:0045664 | 281 | 0.012 | |
| cellular carbohydrate metabolic process | GO:0044262 | 119 | 0.012 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 79 | 0.012 | |
| developmental maturation | GO:0021700 | 193 | 0.011 | |
| chromatin modification | GO:0016568 | 187 | 0.011 | |
| organelle fission | GO:0048285 | 170 | 0.011 | |
| striated muscle myosin thick filament assembly | GO:0071688 | 1 | 0.011 | |
| membrane organization | GO:0061024 | 245 | 0.011 | |
| cation homeostasis | GO:0055080 | 212 | 0.011 | |
| embryonic organ morphogenesis | GO:0048562 | 276 | 0.011 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.011 | |
| respiratory tube development | GO:0030323 | 167 | 0.011 | |
| positive regulation of the force of heart contraction by chemical signal | GO:0003099 | 3 | 0.011 | |
| generation of precursor metabolites and energy | GO:0006091 | 103 | 0.011 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.011 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.011 | |
| ribose phosphate biosynthetic process | GO:0046390 | 59 | 0.011 | |
| oocyte development | GO:0048599 | 33 | 0.011 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.011 | |
| cell division | GO:0051301 | 120 | 0.011 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.011 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.010 | |
| ossification | GO:0001503 | 216 | 0.010 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.010 | |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.010 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.010 | |