| mrna metabolic process | GO:0016071 | 84 | 0.609 | |
| nls bearing protein import into nucleus | GO:0006607 | 2 | 0.557 | |
| rna processing | GO:0006396 | 105 | 0.449 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.359 | |
| ribosome biogenesis | GO:0042254 | 20 | 0.247 | |
| macromolecule methylation | GO:0043414 | 120 | 0.229 | |
| methylation | GO:0032259 | 134 | 0.225 | |
| rna splicing | GO:0008380 | 54 | 0.204 | |
| protein complex disassembly | GO:0043241 | 40 | 0.191 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.164 | |
| nuclear transport | GO:0051169 | 139 | 0.160 | |
| gene silencing by mirna | GO:0035195 | 10 | 0.147 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.141 | |
| purine nucleotide biosynthetic process | GO:0006164 | 65 | 0.131 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.129 | |
| protein import | GO:0017038 | 101 | 0.128 | |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.124 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.106 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.103 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.103 | |
| transmembrane transport | GO:0055085 | 412 | 0.094 | |
| nucleolus organization | GO:0007000 | 5 | 0.092 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.089 | |
| signal transduction by p53 class mediator | GO:0072331 | 51 | 0.080 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.080 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 16 | 0.079 | |
| mrna catabolic process | GO:0006402 | 22 | 0.078 | |
| mitochondrion organization | GO:0007005 | 134 | 0.078 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.077 | |
| protein desumoylation | GO:0016926 | 2 | 0.076 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.076 | |
| rna catabolic process | GO:0006401 | 29 | 0.073 | |
| organophosphate biosynthetic process | GO:0090407 | 122 | 0.072 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.068 | |
| nucleotide biosynthetic process | GO:0009165 | 78 | 0.066 | |
| metaphase plate congression | GO:0051310 | 2 | 0.065 | |
| amine metabolic process | GO:0009308 | 45 | 0.064 | |
| protein targeting | GO:0006605 | 143 | 0.062 | |
| mrna processing | GO:0006397 | 63 | 0.061 | |
| protein alkylation | GO:0008213 | 81 | 0.059 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.058 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.051 | |
| circulatory system process | GO:0003013 | 197 | 0.049 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.048 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.047 | |
| maturation of ssu rrna | GO:0030490 | 1 | 0.043 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.043 | |
| nuclear division | GO:0000280 | 158 | 0.043 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.042 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.042 | |
| protein localization to organelle | GO:0033365 | 185 | 0.042 | |
| ribose phosphate biosynthetic process | GO:0046390 | 59 | 0.041 | |
| negative regulation of dna templated transcription termination | GO:0060567 | 1 | 0.041 | |
| ncrna processing | GO:0034470 | 26 | 0.040 | |
| snorna metabolic process | GO:0016074 | 1 | 0.039 | |
| regulation of intracellular protein transport | GO:0033157 | 82 | 0.039 | |
| peptidyl arginine omega n methylation | GO:0035247 | 2 | 0.038 | |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.038 | |
| dna templated transcription termination | GO:0006353 | 4 | 0.035 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.034 | |
| ribonucleotide biosynthetic process | GO:0009260 | 59 | 0.034 | |
| circadian regulation of gene expression | GO:0032922 | 48 | 0.032 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.032 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.031 | Fly |
| dna damage response signal transduction by p53 class mediator | GO:0030330 | 19 | 0.030 | |
| transcription initiation from rna polymerase i promoter | GO:0006361 | 4 | 0.030 | |
| purine ribonucleotide biosynthetic process | GO:0009152 | 59 | 0.030 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.030 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.030 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.029 | |
| establishment of rna localization | GO:0051236 | 18 | 0.028 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.028 | |
| protein import into nucleus | GO:0006606 | 95 | 0.027 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.027 | |
| response to inorganic substance | GO:0010035 | 96 | 0.027 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.026 | |
| intracellular protein transport | GO:0006886 | 204 | 0.026 | |
| rrna processing | GO:0006364 | 10 | 0.025 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.025 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.025 | |
| rna localization | GO:0006403 | 23 | 0.025 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.025 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.025 | |
| regulation of myeloid cell differentiation | GO:0045637 | 96 | 0.025 | |
| ossification | GO:0001503 | 216 | 0.025 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.024 | |
| leukocyte proliferation | GO:0070661 | 172 | 0.024 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.023 | |
| cellular response to cytokine stimulus | GO:0071345 | 189 | 0.023 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 79 | 0.023 | |
| regulation of translation | GO:0006417 | 71 | 0.023 | |
| protein methylation | GO:0006479 | 81 | 0.022 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.022 | |
| negative regulation of protein modification process | GO:0031400 | 163 | 0.022 | |
| regulation of response to dna damage stimulus | GO:2001020 | 34 | 0.022 | |
| organelle fission | GO:0048285 | 170 | 0.022 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 57 | 0.021 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.021 | |
| spermatogenesis | GO:0007283 | 284 | 0.021 | |
| rna 3 end processing | GO:0031123 | 20 | 0.021 | |
| regulation of establishment of protein localization | GO:0070201 | 181 | 0.021 | |
| response to oxidative stress | GO:0006979 | 123 | 0.021 | |
| organelle disassembly | GO:1903008 | 2 | 0.021 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 34 | 0.021 | |
| positive regulation of protein transport | GO:0051222 | 93 | 0.020 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.020 | |
| response to sterol | GO:0036314 | 4 | 0.020 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.020 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.020 | |
| nuclear transcribed mrna catabolic process deadenylation dependent decay | GO:0000288 | 12 | 0.019 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.019 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.019 | |
| maintenance of location | GO:0051235 | 89 | 0.019 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 73 | 0.019 | |
| intrinsic apoptotic signaling pathway in response to dna damage | GO:0008630 | 57 | 0.018 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.018 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.018 | |
| negative regulation of cell cycle | GO:0045786 | 123 | 0.018 | |
| gene silencing by rna | GO:0031047 | 19 | 0.017 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.017 | |
| positive regulation of protein localization to nucleus | GO:1900182 | 30 | 0.017 | |
| regulation of body fluid levels | GO:0050878 | 162 | 0.017 | |
| gonad development | GO:0008406 | 141 | 0.017 | |
| male gamete generation | GO:0048232 | 285 | 0.016 | |
| generation of precursor metabolites and energy | GO:0006091 | 103 | 0.016 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.016 | |
| mrna export from nucleus | GO:0006406 | 11 | 0.015 | |
| nuclear export | GO:0051168 | 34 | 0.015 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.015 | |
| regulation of protein import into nucleus | GO:0042306 | 52 | 0.015 | |
| regulation of protein localization | GO:0032880 | 231 | 0.015 | |
| blood circulation | GO:0008015 | 195 | 0.015 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 194 | 0.015 | |
| positive regulation of cellular respiration | GO:1901857 | 3 | 0.014 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.014 | |
| developmental cell growth | GO:0048588 | 84 | 0.014 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.014 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.014 | |
| purine containing compound biosynthetic process | GO:0072522 | 70 | 0.014 | |
| defense response to bacterium | GO:0042742 | 119 | 0.014 | |
| lymphocyte proliferation | GO:0046651 | 164 | 0.013 | |
| pyrimidine containing compound metabolic process | GO:0072527 | 11 | 0.013 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.013 | |
| cellular protein complex disassembly | GO:0043624 | 36 | 0.013 | |
| regulation of protein transport | GO:0051223 | 163 | 0.013 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.013 | |
| histone h3 k4 trimethylation | GO:0080182 | 5 | 0.013 | |
| positive regulation of gene silencing by mirna | GO:2000637 | 1 | 0.013 | |
| single organism nuclear import | GO:1902593 | 95 | 0.012 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.012 | |
| heart process | GO:0003015 | 94 | 0.012 | |
| body fluid secretion | GO:0007589 | 53 | 0.012 | |
| macromolecular complex disassembly | GO:0032984 | 43 | 0.012 | |
| stem cell differentiation | GO:0048863 | 268 | 0.012 | |
| ribonucleoside monophosphate biosynthetic process | GO:0009156 | 9 | 0.012 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.012 | |
| nucleoside monophosphate biosynthetic process | GO:0009124 | 12 | 0.012 | |
| canonical wnt signaling pathway | GO:0060070 | 130 | 0.012 | |
| regulation of rna stability | GO:0043487 | 26 | 0.011 | |
| positive regulation of the force of heart contraction by chemical signal | GO:0003099 | 3 | 0.011 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.011 | |
| developmental growth involved in morphogenesis | GO:0060560 | 138 | 0.011 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.011 | |
| sensory perception | GO:0007600 | 245 | 0.011 | |
| muscle contraction | GO:0006936 | 101 | 0.011 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.011 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.011 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 48 | 0.011 | |
| cellular response to lipid | GO:0071396 | 145 | 0.011 | |
| chemotaxis | GO:0006935 | 247 | 0.011 | |
| cation transport | GO:0006812 | 399 | 0.011 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.010 | |
| regulation of dephosphorylation | GO:0035303 | 18 | 0.010 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.010 | |
| regulation of generation of precursor metabolites and energy | GO:0043467 | 38 | 0.010 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.010 | |
| multicellular organismal signaling | GO:0035637 | 91 | 0.010 | |
| establishment of protein localization to membrane | GO:0090150 | 54 | 0.010 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.010 | |
