| positive regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045899 | 2 | 0.220 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.112 | |
| regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045898 | 2 | 0.102 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.096 | |
| protein modification by small protein removal | GO:0070646 | 21 | 0.087 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.081 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.072 | |
| proteasome assembly | GO:0043248 | 1 | 0.071 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.068 | |
| dna repair | GO:0006281 | 107 | 0.068 | |
| double strand break repair | GO:0006302 | 48 | 0.067 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.063 | |
| dna metabolic process | GO:0006259 | 303 | 0.061 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.061 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.060 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 85 | 0.060 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.059 | |
| protein catabolic process | GO:0030163 | 221 | 0.058 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.055 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.053 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.053 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.052 | |
| amine metabolic process | GO:0009308 | 45 | 0.051 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.047 | |
| atp metabolic process | GO:0046034 | 75 | 0.043 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.042 | |
| microtubule based process | GO:0007017 | 236 | 0.042 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.042 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.040 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 56 | 0.040 | |
| proteasomal protein catabolic process | GO:0010498 | 98 | 0.040 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.039 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 88 | 0.039 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.038 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.037 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.036 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.035 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.035 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.033 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.033 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.033 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.033 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.033 | |
| mitochondrion organization | GO:0007005 | 134 | 0.033 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.032 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 4 | 0.032 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.031 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.031 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.030 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 80 | 0.030 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.030 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 58 | 0.029 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.029 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.029 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.028 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.027 | |
| positive regulation of ion transport | GO:0043270 | 65 | 0.026 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.026 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 80 | 0.026 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.025 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.024 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.024 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.024 | |
| positive regulation of protein catabolic process | GO:0045732 | 60 | 0.023 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.022 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.022 | |
| organelle assembly | GO:0070925 | 177 | 0.022 | |
| nucleotide excision repair | GO:0006289 | 13 | 0.021 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.021 | |
| chromatin organization | GO:0006325 | 206 | 0.021 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 94 | 0.021 | |
| gonad development | GO:0008406 | 141 | 0.021 | |
| alcohol metabolic process | GO:0006066 | 116 | 0.020 | |
| regulation of translation | GO:0006417 | 71 | 0.020 | |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.020 | |
| methylation | GO:0032259 | 134 | 0.020 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.019 | |
| rna splicing | GO:0008380 | 54 | 0.019 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.019 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.019 | |
| glycerolipid metabolic process | GO:0046486 | 122 | 0.019 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.019 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.019 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.019 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.019 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 205 | 0.018 | |
| adult behavior | GO:0030534 | 135 | 0.018 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.018 | |
| membrane organization | GO:0061024 | 245 | 0.018 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.018 | |
| calcium ion transport | GO:0006816 | 159 | 0.018 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.017 | |
| lateral inhibition | GO:0046331 | 1 | 0.017 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.017 | |
| histone modification | GO:0016570 | 159 | 0.017 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.017 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.017 | |
| regulation of protein processing | GO:0070613 | 96 | 0.016 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.016 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.016 | |
| protein acylation | GO:0043543 | 64 | 0.016 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 199 | 0.016 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.016 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 129 | 0.016 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.016 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.015 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.015 | |
| ventricular system development | GO:0021591 | 27 | 0.015 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.015 | |
| cation transport | GO:0006812 | 399 | 0.015 | |
| negative regulation of protein processing | GO:0010955 | 79 | 0.015 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.015 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.015 | |
| positive regulation of hydrolase activity | GO:0051345 | 148 | 0.015 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.015 | |
| regulation of proteasomal protein catabolic process | GO:0061136 | 46 | 0.015 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.015 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.015 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.015 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.015 | |
| guanosine containing compound catabolic process | GO:1901069 | 144 | 0.015 | |
| recombinational repair | GO:0000725 | 21 | 0.015 | |
| regulation of ion transport | GO:0043269 | 215 | 0.014 | |
| modification dependent protein catabolic process | GO:0019941 | 133 | 0.014 | |
| phospholipid metabolic process | GO:0006644 | 87 | 0.014 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.014 | |
| positive regulation of proteolysis involved in cellular protein catabolic process | GO:1903052 | 31 | 0.014 | |
| positive regulation of protein complex assembly | GO:0031334 | 45 | 0.013 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 106 | 0.013 | |
| protein dna complex subunit organization | GO:0071824 | 28 | 0.013 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.013 | |
| protein processing | GO:0016485 | 163 | 0.013 | |
| stem cell differentiation | GO:0048863 | 268 | 0.013 | |
| transmembrane transport | GO:0055085 | 412 | 0.013 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.013 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.013 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.013 | |
| negative regulation of protein maturation | GO:1903318 | 79 | 0.012 | |
| cell fate commitment | GO:0045165 | 210 | 0.012 | |
| cell division | GO:0051301 | 120 | 0.012 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.012 | |
| regulation of histone modification | GO:0031056 | 56 | 0.012 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.012 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.012 | |
| chromatin modification | GO:0016568 | 187 | 0.012 | |
| mapk cascade | GO:0000165 | 281 | 0.012 | |
| regulation of protein maturation | GO:1903317 | 96 | 0.012 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 194 | 0.011 | |
| lipid biosynthetic process | GO:0008610 | 179 | 0.011 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.011 | |
| endocytosis | GO:0006897 | 168 | 0.011 | |
| negative regulation of ubiquitin protein transferase activity | GO:0051444 | 3 | 0.011 | |
| leukocyte migration | GO:0050900 | 124 | 0.011 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.011 | |
| trna metabolic process | GO:0006399 | 11 | 0.011 | |
| positive regulation of transferase activity | GO:0051347 | 167 | 0.011 | |
| multicellular organismal response to stress | GO:0033555 | 62 | 0.011 | |
| neural precursor cell proliferation | GO:0061351 | 121 | 0.011 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.011 | |
| regulation of transmembrane transport | GO:0034762 | 128 | 0.011 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.011 | |
| atp catabolic process | GO:0006200 | 55 | 0.011 | |
| dephosphorylation | GO:0016311 | 129 | 0.011 | |
| fertilization | GO:0009566 | 127 | 0.010 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 114 | 0.010 | |
| positive regulation of cellular protein catabolic process | GO:1903364 | 34 | 0.010 | |
| action potential | GO:0001508 | 78 | 0.010 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.010 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.010 | |
| trna aminoacylation | GO:0043039 | 1 | 0.010 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.010 | |
| ear development | GO:0043583 | 200 | 0.010 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.010 | |
| organophosphate biosynthetic process | GO:0090407 | 122 | 0.010 | |
| synaptic transmission | GO:0007268 | 329 | 0.010 | |
| negative regulation of proteolysis | GO:0045861 | 74 | 0.010 | |
| dna recombination | GO:0006310 | 92 | 0.010 | |
