| sulfur compound metabolic process | GO:0006790 | 100 | 0.130 | Yeast |
| pyruvate transport | GO:0006848 | 2 | 0.075 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.063 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.058 | |
| mitochondrion organization | GO:0007005 | 134 | 0.050 | |
| oxidation reduction process | GO:0055114 | 342 | 0.048 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.048 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.044 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.043 | |
| monocarboxylic acid metabolic process | GO:0032787 | 191 | 0.041 | Yeast |
| transmembrane transport | GO:0055085 | 412 | 0.041 | |
| intracellular protein transport | GO:0006886 | 204 | 0.040 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.040 | |
| acyl coa metabolic process | GO:0006637 | 19 | 0.039 | |
| mapk cascade | GO:0000165 | 281 | 0.039 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.038 | |
| cofactor metabolic process | GO:0051186 | 80 | 0.038 | Yeast |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.037 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.033 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.032 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.032 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.032 | |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.031 | Yeast |
| cellular amide metabolic process | GO:0043603 | 58 | 0.030 | Yeast |
| nitrogen compound transport | GO:0071705 | 271 | 0.030 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.030 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.030 | |
| amine metabolic process | GO:0009308 | 45 | 0.029 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.028 | |
| protein localization to organelle | GO:0033365 | 185 | 0.028 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.027 | |
| carboxylic acid biosynthetic process | GO:0046394 | 86 | 0.027 | Yeast |
| sulfur compound biosynthetic process | GO:0044272 | 37 | 0.026 | Yeast |
| pyruvate metabolic process | GO:0006090 | 28 | 0.025 | |
| microtubule based process | GO:0007017 | 236 | 0.025 | |
| protein maturation | GO:0051604 | 176 | 0.024 | |
| iron sulfur cluster assembly | GO:0016226 | 3 | 0.024 | Yeast |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.023 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.022 | |
| protein targeting | GO:0006605 | 143 | 0.022 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.022 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.022 | |
| substantia nigra development | GO:0021762 | 2 | 0.021 | |
| coenzyme biosynthetic process | GO:0009108 | 23 | 0.021 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.021 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.020 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.020 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.020 | |
| exocytosis | GO:0006887 | 121 | 0.019 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.019 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.018 | |
| regulation of intracellular protein transport | GO:0033157 | 82 | 0.018 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.018 | |
| response to oxygen levels | GO:0070482 | 62 | 0.018 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.017 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.017 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.017 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.017 | |
| lymphocyte proliferation | GO:0046651 | 164 | 0.017 | |
| regulation of protein kinase activity | GO:0045859 | 232 | 0.016 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.016 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.016 | |
| peptide transport | GO:0015833 | 133 | 0.016 | |
| regulation of secretion by cell | GO:1903530 | 249 | 0.016 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.016 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.016 | |
| inflammatory response | GO:0006954 | 244 | 0.016 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.016 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.016 | |
| cofactor biosynthetic process | GO:0051188 | 41 | 0.016 | |
| neuron death | GO:0070997 | 154 | 0.015 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.015 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.015 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.015 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.015 | |
| canonical wnt signaling pathway | GO:0060070 | 130 | 0.015 | |
| regulation of secretion | GO:0051046 | 274 | 0.014 | |
| protein processing | GO:0016485 | 163 | 0.014 | |
| protein import | GO:0017038 | 101 | 0.014 | |
| anion transmembrane transport | GO:0098656 | 71 | 0.014 | |
| positive regulation of transferase activity | GO:0051347 | 167 | 0.014 | |
| protein catabolic process | GO:0030163 | 221 | 0.014 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 77 | 0.014 | |
| stem cell development | GO:0048864 | 219 | 0.014 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.014 | |
| glycerophospholipid biosynthetic process | GO:0046474 | 32 | 0.014 | |
| regulation of reactive oxygen species metabolic process | GO:2000377 | 40 | 0.014 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.014 | |
| water soluble vitamin biosynthetic process | GO:0042364 | 3 | 0.013 | Yeast |
| regulation of wnt signaling pathway | GO:0030111 | 123 | 0.013 | |
| response to inorganic substance | GO:0010035 | 96 | 0.013 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.013 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.013 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.013 | |
| regulation of neuron death | GO:1901214 | 134 | 0.013 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.013 | |
| positive regulation of cell cycle | GO:0045787 | 92 | 0.013 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.013 | Yeast |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.013 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.013 | |
| regulation of transferase activity | GO:0051338 | 263 | 0.013 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.013 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.013 | |
| amide transport | GO:0042886 | 138 | 0.012 | |
| protein import into nucleus | GO:0006606 | 95 | 0.012 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.012 | |
| positive regulation of mapk cascade | GO:0043410 | 170 | 0.012 | |
| cell growth | GO:0016049 | 130 | 0.012 | |
| male gamete generation | GO:0048232 | 285 | 0.012 | |
| neuron apoptotic process | GO:0051402 | 142 | 0.012 | |
| glycosyl compound catabolic process | GO:1901658 | 206 | 0.012 | |
| regulation of protein transport | GO:0051223 | 163 | 0.012 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.012 | |
| wnt signaling pathway | GO:0016055 | 188 | 0.011 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.011 | |
| negative regulation of cellular amino acid metabolic process | GO:0045763 | 0 | 0.011 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.011 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.011 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.011 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 157 | 0.011 | |
| fat cell differentiation | GO:0045444 | 160 | 0.011 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 80 | 0.011 | |
| monocarboxylic acid biosynthetic process | GO:0072330 | 61 | 0.011 | Yeast |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.011 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.011 | |
| sensory organ morphogenesis | GO:0090596 | 242 | 0.011 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.011 | |
| response to oxidative stress | GO:0006979 | 123 | 0.011 | |
| regulation of peptide transport | GO:0090087 | 91 | 0.011 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.011 | |
| regulation of nucleotide catabolic process | GO:0030811 | 122 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.011 | |
| mitochondrial transport | GO:0006839 | 36 | 0.011 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.011 | |
| positive regulation of protein kinase activity | GO:0045860 | 144 | 0.011 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.011 | |
| negative regulation of growth | GO:0045926 | 99 | 0.011 | |
| response to starvation | GO:0042594 | 65 | 0.011 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.011 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.011 | |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.011 | |
| chromatin organization | GO:0006325 | 206 | 0.011 | |
| anion transport | GO:0006820 | 177 | 0.011 | |
| nuclear import | GO:0051170 | 95 | 0.011 | |
| cellular response to extracellular stimulus | GO:0031668 | 81 | 0.011 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.010 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.010 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.010 | |
| regulation of protein complex assembly | GO:0043254 | 83 | 0.010 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.010 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.010 | |
| positive regulation of protein serine threonine kinase activity | GO:0071902 | 106 | 0.010 | |
| regulation of lymphocyte differentiation | GO:0045619 | 107 | 0.010 | |
| positive regulation of secretion | GO:0051047 | 130 | 0.010 | |
| regulation of cell activation | GO:0050865 | 289 | 0.010 | |
| regulation of protein localization to nucleus | GO:1900180 | 60 | 0.010 | |
