IMP: Integrative Multi-species Prediction

Mus musculus

0 known processes

Usp39

ubiquitin specific peptidase 39

(Aliases: SAD1,AA408960,D6Wsu157e,CGI-21,AI894154)

Entrez: 28035
Ensembl: ENSMUSG00000056305
UniProtKB: Q3TIX9

Process Predictions
Disease Predictions

Usp39 biological process predictions

Show only novel predictionsHighlight processes of functional analogs

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Biological process	GO term ID	Process size	Probability
nuclear division	GO:0000280	158	0.170
organelle fission	GO:0048285	170	0.159
mitotic nuclear division	GO:0007067	48	0.125
microtubule based process	GO:0007017	236	0.108
rna processing	GO:0006396	105	0.097
microtubule cytoskeleton organization	GO:0000226	157	0.089
mitotic cell cycle	GO:0000278	195	0.081
cellular amino acid metabolic process	GO:0006520	103	0.081
cellular nitrogen compound catabolic process	GO:0044270	280	0.077
dna replication	GO:0006260	52	0.050
cellular amine metabolic process	GO:0044106	44	0.048
positive regulation of rna polymerase ii transcriptional preinitiation complex assembly	GO:0045899	2	0.039
protein dna complex subunit organization	GO:0071824	28	0.037
amine metabolic process	GO:0009308	45	0.037
organic cyclic compound catabolic process	GO:1901361	295	0.036
rna splicing via transesterification reactions	GO:0000375	43	0.035
cell division	GO:0051301	120	0.034
response to acid chemical	GO:0001101	111	0.031
nucleobase containing compound transport	GO:0015931	27	0.030
cellular ketone metabolic process	GO:0042180	84	0.029
nucleocytoplasmic transport	GO:0006913	139	0.029
rna splicing	GO:0008380	54	0.029
germ cell development	GO:0007281	185	0.028
mrna processing	GO:0006397	63	0.027
regulation of cellular amino acid metabolic process	GO:0006521	5	0.027
positive regulation of apoptotic process	GO:0043065	217	0.027
mrna splicing via spliceosome	GO:0000398	43	0.027
regulation of organelle organization	GO:0033043	289	0.026
glycosyl compound metabolic process	GO:1901657	246	0.026
regulation of cellular ketone metabolic process	GO:0010565	66	0.026
mrna metabolic process	GO:0016071	84	0.025
ncrna processing	GO:0034470	26	0.024
regulation of cellular amine metabolic process	GO:0033238	20	0.024
regulation of cell cycle process	GO:0010564	160	0.024
spindle assembly involved in mitosis	GO:0090307	4	0.024
carbohydrate derivative biosynthetic process	GO:1901137	183	0.023
blastocyst development	GO:0001824	80	0.023
ribonucleoside triphosphate catabolic process	GO:0009203	199	0.023
positive regulation of cellular amine metabolic process	GO:0033240	5	0.023
endocytosis	GO:0006897	168	0.023
maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna	GO:0000463	1	0.022
nucleoside triphosphate metabolic process	GO:0009141	230	0.022
nuclear transport	GO:0051169	139	0.022
dna metabolic process	GO:0006259	303	0.021
positive regulation of cell death	GO:0010942	224	0.020
dna templated transcriptional preinitiation complex assembly	GO:0070897	4	0.020
nitrogen compound transport	GO:0071705	271	0.020
chemotaxis	GO:0006935	247	0.019
rrna processing	GO:0006364	10	0.019
regulation of nuclear division	GO:0051783	56	0.019
purine nucleoside triphosphate catabolic process	GO:0009146	203	0.018
small gtpase mediated signal transduction	GO:0007264	97	0.018
macromolecule catabolic process	GO:0009057	281	0.018
cytoplasmic transport	GO:0016482	234	0.017
cellular macromolecule catabolic process	GO:0044265	206	0.017
nucleoside phosphate metabolic process	GO:0006753	338	0.017
maturation of lsu rrna	GO:0000470	1	0.017
aromatic compound catabolic process	GO:0019439	286	0.017
gene silencing	GO:0016458	38	0.017
cellular response to acid chemical	GO:0071229	68	0.017
negative regulation of molecular function	GO:0044092	258	0.017
dna conformation change	GO:0071103	37	0.016
dna templated transcription initiation	GO:0006352	13	0.016
response to organonitrogen compound	GO:0010243	246	0.016
rna localization	GO:0006403	23	0.016
negative regulation of protein metabolic process	GO:0051248	282	0.015
organelle assembly	GO:0070925	177	0.015
gonad development	GO:0008406	141	0.015
regulation of cell division	GO:0051302	76	0.015
cell adhesion	GO:0007155	329	0.015
regulation of hydrolase activity	GO:0051336	246	0.015
ribonucleoside catabolic process	GO:0042454	206	0.015
regulation of intracellular transport	GO:0032386	159	0.015
fertilization	GO:0009566	127	0.014
meiotic cell cycle	GO:0051321	122	0.014
regulation of cell cycle	GO:0051726	281	0.014
regulation of mitotic cell cycle	GO:0007346	126	0.014
multicellular organismal homeostasis	GO:0048871	164	0.014
response to peptide	GO:1901652	136	0.014
microtubule cytoskeleton organization involved in mitosis	GO:1902850	4	0.013
glucose homeostasis	GO:0042593	128	0.013
transcription coupled nucleotide excision repair	GO:0006283	2	0.013
protein localization to nucleus	GO:0034504	121	0.013
response to testosterone	GO:0033574	3	0.013
regulation of neuron differentiation	GO:0045664	281	0.013
cytoplasmic translational initiation	GO:0002183	3	0.013
leukocyte migration	GO:0050900	124	0.013
organophosphate catabolic process	GO:0046434	232	0.013
ribosome biogenesis	GO:0042254	20	0.013
nucleotide metabolic process	GO:0009117	332	0.013
chromatin organization	GO:0006325	206	0.013
single organism nuclear import	GO:1902593	95	0.013
purine containing compound metabolic process	GO:0072521	311	0.013
positive regulation of cellular amino acid metabolic process	GO:0045764	3	0.012
purine containing compound catabolic process	GO:0072523	213	0.012
spindle organization	GO:0007051	28	0.012
cell type specific apoptotic process	GO:0097285	268	0.012
protein lipidation	GO:0006497	28	0.012
negative regulation of cell proliferation	GO:0008285	296	0.012
organophosphate biosynthetic process	GO:0090407	122	0.012
regulation of neuron projection development	GO:0010975	169	0.012
regulation of protein transport	GO:0051223	163	0.012
transmembrane receptor protein tyrosine kinase signaling pathway	GO:0007169	247	0.012
cellular chemical homeostasis	GO:0055082	215	0.012
ras protein signal transduction	GO:0007265	77	0.011
nucleoside phosphate catabolic process	GO:1901292	222	0.011
homeostasis of number of cells	GO:0048872	210	0.011
stem cell differentiation	GO:0048863	268	0.011
ion transmembrane transport	GO:0034220	361	0.011
purine ribonucleoside triphosphate catabolic process	GO:0009207	199	0.011
ribonucleotide catabolic process	GO:0009261	208	0.011
purine nucleoside triphosphate metabolic process	GO:0009144	226	0.011
retina development in camera type eye	GO:0060041	119	0.011
oogenesis	GO:0048477	56	0.011
camera type eye development	GO:0043010	266	0.011
myeloid cell differentiation	GO:0030099	233	0.011
mapk cascade	GO:0000165	281	0.011
cellular homeostasis	GO:0019725	240	0.011
stem cell development	GO:0048864	219	0.011
trna wobble base modification	GO:0002097	2	0.011
locomotory behavior	GO:0007626	195	0.011
female gamete generation	GO:0007292	74	0.011
cell cycle switching	GO:0060184	1	0.011
protein import into nucleus	GO:0006606	95	0.011
g protein coupled receptor signaling pathway	GO:0007186	243	0.011
negative regulation of cellular protein metabolic process	GO:0032269	247	0.011
purine nucleotide metabolic process	GO:0006163	302	0.011
gland development	GO:0048732	330	0.010
myeloid leukocyte differentiation	GO:0002573	119	0.010
peptidyl amino acid modification	GO:0018193	336	0.010
response to peptide hormone	GO:0043434	127	0.010
glycoprotein biosynthetic process	GO:0009101	89	0.010
purine nucleoside catabolic process	GO:0006152	205	0.010
protein import	GO:0017038	101	0.010
multicellular organismal signaling	GO:0035637	91	0.010
anatomical structure homeostasis	GO:0060249	145	0.010
purine ribonucleotide catabolic process	GO:0009154	208	0.010
cellular response to organonitrogen compound	GO:0071417	145	0.010
lateral inhibition	GO:0046331	1	0.010
ribose phosphate metabolic process	GO:0019693	291	0.010
cellular response to lipid	GO:0071396	145	0.010
regulation of hormone levels	GO:0010817	211	0.010
cellular glucose homeostasis	GO:0001678	52	0.010
cell recognition	GO:0008037	83	0.010
inner cell mass cell proliferation	GO:0001833	15	0.010

Usp39 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in mouse and predicted with the mouse functional network.

Disease	DO term ID	Probability
nervous system disease	DOID:863	0.068
disease of anatomical entity	DOID:7	0.068
neuropathy	DOID:870	0.021
central nervous system disease	DOID:331	0.016
neurodegenerative disease	DOID:1289	0.011

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