Mus musculus

74 known processes

Trim56

tripartite motif-containing 56

(Aliases: Gm452,A130009K11Rik,RNF109,MGC37358)

Trim56 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
regulation of cytokine productionGO:00018172660.077
immune effector processGO:00022523210.067
cytokine productionGO:00018163190.065
regulation of defense responseGO:00313472330.064
activation of immune responseGO:00022531380.055
interspecies interaction between organismsGO:0044419830.055
protein modification by small protein conjugationGO:00324461870.052
macromolecule catabolic processGO:00090572810.050
cellular amino acid metabolic processGO:00065201030.050
cellular amine metabolic processGO:0044106440.048
protein modification by small protein conjugation or removalGO:00706472070.048
viral processGO:0016032410.045
organic cyclic compound catabolic processGO:19013612950.044
protein ubiquitinationGO:00165671710.044
amine metabolic processGO:0009308450.044
innate immune responseGO:00450871570.044
aromatic compound catabolic processGO:00194392860.043
symbiosis encompassing mutualism through parasitismGO:0044403830.042
positive regulation of cellular amino acid metabolic processGO:004576430.042
negative regulation of molecular functionGO:00440922580.041
regulation of cellular amine metabolic processGO:0033238200.039
immune response activating signal transductionGO:00027571160.038
nucleoside phosphate metabolic processGO:00067533380.038
nucleobase containing small molecule metabolic processGO:00550863520.036
cellular macromolecule catabolic processGO:00442652060.036
positive regulation of cellular amine metabolic processGO:003324050.036
cellular ketone metabolic processGO:0042180840.035
regulation of innate immune responseGO:0045088910.034
regulation of multi organism processGO:00439001110.034
mapk cascadeGO:00001652810.034
protein catabolic processGO:00301632210.033
positive regulation of cytokine productionGO:00018191740.033
defense response to virusGO:0051607680.033
regulation of organelle organizationGO:00330432890.032
regulation of cellular ketone metabolic processGO:0010565660.032
nucleotide metabolic processGO:00091173320.031
immune response regulating signaling pathwayGO:00027641250.031
negative regulation of protein metabolic processGO:00512482820.031
regulation of cellular amino acid metabolic processGO:000652150.031
regulation of protein localizationGO:00328802310.031
negative regulation of cellular protein metabolic processGO:00322692470.030
positive regulation of innate immune responseGO:0045089800.030
myeloid cell differentiationGO:00300992330.030
oxidation reduction processGO:00551143420.029
small gtpase mediated signal transductionGO:0007264970.029
ras protein signal transductionGO:0007265770.029
purine ribonucleotide metabolic processGO:00091502900.029
dna metabolic processGO:00062593030.028
cellular nitrogen compound catabolic processGO:00442702800.028
reactive oxygen species metabolic processGO:0072593840.027
activation of innate immune responseGO:0002218560.027
peptidyl amino acid modificationGO:00181933360.027
glycosyl compound metabolic processGO:19016572460.027
apoptotic signaling pathwayGO:00971903060.026
chromatin organizationGO:00063252060.026
negative regulation of cell developmentGO:00107211690.026
negative regulation of cellular component organizationGO:00511291940.026
ossificationGO:00015032160.026
intracellular protein transportGO:00068862040.026
cellular protein catabolic processGO:00442571550.026
heterocycle catabolic processGO:00467002800.026
ribonucleotide metabolic processGO:00092592910.025
negative regulation of immune system processGO:00026832090.025
positive regulation of interleukin 8 productionGO:003275720.025
transmembrane transportGO:00550854120.025
negative regulation of cell proliferationGO:00082852960.025
purine containing compound metabolic processGO:00725213110.025
cellular response to lipidGO:00713961450.024
posttranscriptional regulation of gene expressionGO:00106081550.024
purine nucleotide metabolic processGO:00061633020.024
regulation of establishment of protein localizationGO:00702011810.024
interleukin 8 productionGO:003263740.023
negative regulation of protein modification processGO:00314001630.023
membrane organizationGO:00610242450.023
organonitrogen compound catabolic processGO:19015652640.023
response to organonitrogen compoundGO:00102432460.023
nucleoside phosphate catabolic processGO:19012922220.023
ribose phosphate metabolic processGO:00196932910.023
regulation of cellular component biogenesisGO:00440871810.023
purine ribonucleotide catabolic processGO:00091542080.023
leukocyte differentiationGO:00025213420.023
ion transmembrane transportGO:00342203610.023
regulation of interleukin 8 productionGO:003267730.023
negative regulation of nlrp3 inflammasome complex assemblyGO:190022620.023
response to organic cyclic compoundGO:00140701980.023
nucleocytoplasmic transportGO:00069131390.022
cation transportGO:00068123990.022
purine ribonucleoside metabolic processGO:00461282410.022
histone modificationGO:00165701590.022
cytoplasmic transportGO:00164822340.022
anion transportGO:00068201770.022
modification dependent macromolecule catabolic processGO:00436321330.022
negative regulation of phosphorus metabolic processGO:00105631840.022
covalent chromatin modificationGO:00165691630.022
purine ribonucleoside triphosphate metabolic processGO:00092052200.022
t cell activationGO:00421102890.022
positive regulation of defense responseGO:00313491240.022
purine nucleoside triphosphate catabolic processGO:00091462030.021
regulation of cell activationGO:00508652890.021
nucleoside metabolic processGO:00091162460.021
nucleoside triphosphate metabolic processGO:00091412300.021
ribonucleoside triphosphate metabolic processGO:00091992200.021
positive regulation of protein modification processGO:00314012990.021
chromatin modificationGO:00165681870.021
negative regulation of cellular amino acid metabolic processGO:004576300.021
carbohydrate derivative catabolic processGO:19011362310.021
carbohydrate metabolic processGO:00059752300.021
purine nucleoside metabolic processGO:00422782410.021
spermatogenesisGO:00072832840.020
ribonucleoside metabolic processGO:00091192450.020
positive regulation of mapk cascadeGO:00434101700.020
regulation of mapk cascadeGO:00434082480.020
regulation of cellular catabolic processGO:00313292420.020
cation transmembrane transportGO:00986552660.020
cellular lipid metabolic processGO:00442553230.020
proteolysis involved in cellular protein catabolic processGO:00516031470.020
organonitrogen compound biosynthetic processGO:19015661920.020
positive regulation of hydrolase activityGO:00513451480.020
purine nucleoside catabolic processGO:00061522050.020
negative regulation of nervous system developmentGO:00519611560.020
positive regulation of protein phosphorylationGO:00019342420.020
regulation of intracellular transportGO:00323861590.020
homeostasis of number of cellsGO:00488722100.019
respiratory system developmentGO:00605411900.019
protein targetingGO:00066051430.019
negative regulation of phosphorylationGO:00423261660.019
regulation of reactive oxygen species metabolic processGO:2000377400.019
nuclear transportGO:00511691390.019
negative regulation of intracellular signal transductionGO:19025321670.019
negative regulation of multi organism processGO:0043901680.019
myeloid cell homeostasisGO:00022621140.019
actin cytoskeleton organizationGO:00300362200.019
rho protein signal transductionGO:0007266320.019
defense response to other organismGO:00985421970.019
regulation of hydrolase activityGO:00513362460.018
negative regulation of cellular amine metabolic processGO:003323910.018
male gamete generationGO:00482322850.018
striated muscle tissue developmentGO:00147062930.018
regulation of cellular response to stressGO:00801351590.018
cellular response to dna damage stimulusGO:00069742070.018
ubiquitin dependent protein catabolic processGO:00065111290.018
negative regulation of defense responseGO:0031348770.018
synaptic transmissionGO:00072683290.018
divalent inorganic cation transportGO:00725111780.018
nucleotide catabolic processGO:00091662170.018
negative regulation of phosphate metabolic processGO:00459361840.018
nucleoside catabolic processGO:00091642060.018
positive regulation of viral entry into host cellGO:004659830.018
purine containing compound catabolic processGO:00725232130.017
defense response to bacteriumGO:00427421190.017
response to lipopolysaccharideGO:00324961280.017
regulation of membrane potentialGO:00423911920.017
nitrogen compound transportGO:00717052710.017
regulation of t cell activationGO:00508631700.017
regulation of nlrp3 inflammasome complex assemblyGO:190022540.017
regulation of sequence specific dna binding transcription factor activityGO:00510901060.017
cellular protein complex assemblyGO:00436231160.017
positive regulation of interferon alpha productionGO:003272740.017
regulation of transferase activityGO:00513382630.017
response to molecule of bacterial originGO:00022371430.017
response to oxidative stressGO:00069791230.017
regulation of protein complex assemblyGO:0043254830.017
protein localization to organelleGO:00333651850.016
carbohydrate derivative biosynthetic processGO:19011371830.016
hematopoietic progenitor cell differentiationGO:00022441430.016
protein localization to nucleusGO:00345041210.016
microtubule based processGO:00070172360.016
regulation of protein transportGO:00512231630.016
organophosphate catabolic processGO:00464342320.016
cell type specific apoptotic processGO:00972852680.016
cellular response to molecule of bacterial originGO:0071219830.016
purine ribonucleoside catabolic processGO:00461302050.016
modification dependent protein catabolic processGO:00199411330.016
organelle localizationGO:00516401790.016
purine nucleotide catabolic processGO:00061952110.016
compound eye developmentGO:004874910.016
pattern recognition receptor signaling pathwayGO:0002221470.016
regulation of response to woundingGO:19030341890.016
regulation of body fluid levelsGO:00508781620.016
single organism nuclear importGO:1902593950.016
lung developmentGO:00303241640.016
ribonucleotide catabolic processGO:00092612080.016
positive regulation of organelle organizationGO:00106381280.016
inorganic cation transmembrane transportGO:00986622070.016
gland developmentGO:00487323300.016
sensory perceptionGO:00076002450.015
muscle tissue developmentGO:00605373080.015
germ cell developmentGO:00072811850.015
cellular response to organonitrogen compoundGO:00714171450.015
cellular homeostasisGO:00197252400.015
positive regulation of cellular catabolic processGO:00313311480.015
interleukin 6 productionGO:0032635580.015
regulation of interleukin 6 productionGO:0032675550.015
cellular response to lipopolysaccharideGO:0071222770.015
endocytosisGO:00068971680.015
viral gene expressionGO:001908030.015
cofactor metabolic processGO:0051186800.015
rna processingGO:00063961050.015
leukocyte proliferationGO:00706611720.015
regulation of protein catabolic processGO:00421761080.015
positive regulation of apoptotic processGO:00430652170.015
respiratory tube developmentGO:00303231670.015
purine ribonucleoside triphosphate catabolic processGO:00092071990.015
blood vessel morphogenesisGO:00485142850.015
lymphocyte proliferationGO:00466511640.015
negative regulation of protein phosphorylationGO:00019331260.015
ribonucleoside catabolic processGO:00424542060.014
cellular response to cytokine stimulusGO:00713451890.014
regulation of response to biotic stimulusGO:0002831380.014
mrna metabolic processGO:0016071840.014
inorganic ion transmembrane transportGO:00986602340.014
inflammatory responseGO:00069542440.014
skeletal system developmentGO:00015013560.014
dephosphorylationGO:00163111290.014
maintenance of locationGO:0051235890.014
regulation of system processGO:00440572000.014
regulation of cytoplasmic transportGO:19036491120.014
regulation of actin nucleationGO:005112540.014
organelle assemblyGO:00709251770.014
wnt signaling pathwayGO:00160551880.014
neuronal action potentialGO:0019228540.014
protein importGO:00170381010.014
actin polymerization or depolymerizationGO:0008154540.014
nucleoside triphosphate catabolic processGO:00091432050.014
positive regulation of immune effector processGO:00026991070.014
protein import into nucleusGO:0006606950.014
negative regulation of viral processGO:0048525230.014
stem cell differentiationGO:00488632680.014
regulation of kinase activityGO:00435492490.014
purine nucleoside triphosphate metabolic processGO:00091442260.014
wound healingGO:00420601570.014
muscle cell differentiationGO:00426922610.014
microtubule cytoskeleton organizationGO:00002261570.014
fat cell differentiationGO:00454441600.014
protein processingGO:00164851630.014
ribonucleoside triphosphate catabolic processGO:00092031990.014
cell adhesionGO:00071553290.014
organic hydroxy compound transportGO:0015850930.014
regulation of leukocyte differentiationGO:19021051590.014
regulation of purine nucleotide metabolic processGO:19005421690.014
leukocyte mediated immunityGO:00024431740.014
regulation of ossificationGO:00302781120.013
regulation of lymphocyte activationGO:00512492400.013
positive regulation of viral genome replicationGO:004507020.013
regulation of apoptotic signaling pathwayGO:20012331970.013
transmission of nerve impulseGO:0019226760.013
t cell proliferationGO:00420981200.013
carbohydrate homeostasisGO:00335001280.013
urogenital system developmentGO:00016552610.013
proteasomal protein catabolic processGO:0010498980.013
divalent metal ion transportGO:00708381720.013
gtp catabolic processGO:00061841430.013
actin filament organizationGO:00070151130.013
innate immune response activating signal transductionGO:0002758500.013
negative regulation of cytokine productionGO:0001818840.013
regulation of cell cycleGO:00517262810.013
positive regulation of cell deathGO:00109422240.013
epithelial cell proliferationGO:00506731740.013
transmembrane receptor protein serine threonine kinase signaling pathwayGO:00071781940.013
regulation of nucleotide catabolic processGO:00308111220.013
entry into cell of other organism involved in symbiotic interactionGO:0051806150.013
regulation of organ morphogenesisGO:20000271440.013
organophosphate biosynthetic processGO:00904071220.013
spermatid differentiationGO:00485151150.013
lymphocyte differentiationGO:00300982420.013
protein maturationGO:00516041760.013
regulation of purine nucleotide catabolic processGO:00331211220.013
lipid biosynthetic processGO:00086101790.013
regulation of ion transportGO:00432692150.013
lymphocyte mediated immunityGO:00024491390.013
type i interferon productionGO:0032606290.013
renal system developmentGO:00720012250.013
proteasome mediated ubiquitin dependent protein catabolic processGO:0043161880.013
transmembrane receptor protein tyrosine kinase signaling pathwayGO:00071692470.013
cation homeostasisGO:00550802120.013
fertilizationGO:00095661270.013
lipid transportGO:0006869980.013
i kappab kinase nf kappab signalingGO:0007249850.013
forebrain developmentGO:00309003020.013
regulation of cytoskeleton organizationGO:00514931220.013
alcohol metabolic processGO:00060661160.013
cellular response to biotic stimulusGO:0071216920.013
organic hydroxy compound metabolic processGO:19016152030.013
glycosyl compound catabolic processGO:19016582060.013
regulation of symbiosis encompassing mutualism through parasitismGO:0043903520.013
regulation of cell migrationGO:00303342190.013
multicellular organismal signalingGO:0035637910.013
cellular chemical homeostasisGO:00550822150.012
action potentialGO:0001508780.012
monocarboxylic acid metabolic processGO:00327871910.012
response to extracellular stimulusGO:00099911270.012
response to acid chemicalGO:00011011110.012
positive regulation of nervous system developmentGO:00519622210.012
regulation of cellular component sizeGO:00325351210.012
mitotic cell cycleGO:00002781950.012
regulation of hormone levelsGO:00108172110.012
intracellular receptor signaling pathwayGO:0030522740.012
viral transcriptionGO:001908330.012
negative regulation of organelle organizationGO:0010639900.012
regulation of secretionGO:00510462740.012
intrinsic apoptotic signaling pathwayGO:00971931320.012
positive regulation of t cell receptor signaling pathwayGO:005086240.012
plasma membrane organizationGO:0007009900.012
regulation of inflammatory responseGO:00507271470.012
regulation of neuron differentiationGO:00456642810.012
small molecule biosynthetic processGO:00442831320.012
establishment of protein localization to organelleGO:00725941180.012
regulation of nucleotide metabolic processGO:00061401690.012
response to endoplasmic reticulum stressGO:0034976530.012
retrograde transport endosome to golgiGO:004214720.012
cell activation involved in immune responseGO:00022631260.012
nuclear importGO:0051170950.012
positive regulation of programmed cell deathGO:00430682180.012
morphogenesis of a branching structureGO:00017632030.012
angiogenesisGO:00015252010.012
multicellular organismal homeostasisGO:00488711640.012
digestive system developmentGO:00551232000.012
positive regulation of protein catabolic processGO:0045732600.012
chemotaxisGO:00069352470.012
cellular ion homeostasisGO:00068731650.012
endomembrane system organizationGO:00102561470.012
actin filament polymerizationGO:0030041440.012
protein polymerizationGO:0051258570.012
sensory organ morphogenesisGO:00905962420.012
regulation of proteolysisGO:00301621640.012
regulation of secretion by cellGO:19035302490.012
response to oxygen levelsGO:0070482620.012
myeloid leukocyte differentiationGO:00025731190.012
regulation of cell motilityGO:20001452360.012
rna interferenceGO:001624620.011
organic anion transportGO:00157111370.011
epithelial tube morphogenesisGO:00605623030.011
muscle system processGO:00030121410.011
positive regulation of protein transportGO:0051222930.011
regulation of anatomical structure sizeGO:00900661780.011
rna catabolic processGO:0006401290.011
response to growth factorGO:00708481980.011
protein localization to membraneGO:00726571080.011
leukocyte activation involved in immune responseGO:00023661260.011
mitotic cytokinesisGO:000028140.011
anatomical structure homeostasisGO:00602491450.011
extrinsic apoptotic signaling pathwayGO:00971911260.011
regulation of protein targetingGO:1903533610.011
regulation of cell cycle processGO:00105641600.011
ear developmentGO:00435832000.011
erythrocyte differentiationGO:0030218880.011
extracellular structure organizationGO:00430621480.011
dna repairGO:00062811070.011
kidney developmentGO:00018222130.011
lateral inhibitionGO:004633110.011
vesicle localizationGO:0051648860.011
regulation of viral transcriptionGO:004678230.011
skin developmentGO:00435882200.011
regulation of feeding behaviorGO:006025930.011
mitotic cell cycle processGO:19030471590.011
multicellular organism growthGO:00352641610.011
reactive nitrogen species metabolic processGO:200105700.011
regulation of cell projection organizationGO:00313442060.011
oocyte constructionGO:000730820.011
negative regulation of viral transcriptionGO:003289730.011
positive regulation of cell developmentGO:00107202370.011
muscle cell developmentGO:00550011330.011
purine nucleoside monophosphate metabolic processGO:0009126810.011
cellular response to hormone stimulusGO:00328701500.011
regulation of lymphocyte proliferationGO:00506701170.011
nuclear divisionGO:00002801580.011
carboxylic acid biosynthetic processGO:0046394860.011
tissue homeostasisGO:00018941150.011
g protein coupled receptor signaling pathwayGO:00071862430.011
sequestering of calcium ionGO:0051208180.011
nucleoside monophosphate metabolic processGO:0009123850.011
camera type eye developmentGO:00430102660.011
pharynx developmentGO:006046510.011
organelle fissionGO:00482851700.011
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domainsGO:00024601450.010
response to peptideGO:19016521360.010
positive regulation of actin nucleationGO:005112730.010
response to nutrient levelsGO:00316671090.010
cellular response to growth factor stimulusGO:00713631970.010
tissue remodelingGO:00487711020.010
glucose homeostasisGO:00425931280.010
methylationGO:00322591340.010
regulation of mitotic cell cycleGO:00073461260.010
neuron deathGO:00709971540.010
membrane tubulationGO:009732040.010
positive regulation of cell activationGO:00508671580.010
axonogenesisGO:00074092740.010
regulation of wnt signaling pathwayGO:00301111230.010
telencephalon developmentGO:00215371860.010
cytokinetic processGO:003250620.010
t cell differentiationGO:00302171740.010
positive regulation of nucleotide metabolic processGO:00459811140.010
regionalizationGO:00030023370.010
negative regulation of growthGO:0045926990.010
metal ion homeostasisGO:00550651890.010
cell divisionGO:00513011200.010
organic acid biosynthetic processGO:0016053860.010

Trim56 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in mouse and predicted with the mouse functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
cancerDOID:16200.020
organ system cancerDOID:005068600.020
disease of cellular proliferationDOID:1456600.020
disease of metabolismDOID:001466700.019
nervous system diseaseDOID:86300.018
disease of anatomical entityDOID:700.018
immune system diseaseDOID:291400.016
hematopoietic system diseaseDOID:7400.013
connective tissue diseaseDOID:6500.011
musculoskeletal system diseaseDOID:1700.011
bone diseaseDOID:008000100.011
central nervous system diseaseDOID:33100.010