| mitochondrion organization | GO:0007005 | 134 | 0.188 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.154 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.140 | |
| protein localization to organelle | GO:0033365 | 185 | 0.135 | |
| mitochondrial transport | GO:0006839 | 36 | 0.130 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.102 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.096 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.095 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.079 | |
| male gamete generation | GO:0048232 | 285 | 0.075 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.074 | |
| response to radiation | GO:0009314 | 165 | 0.072 | |
| dna metabolic process | GO:0006259 | 303 | 0.070 | |
| intracellular protein transport | GO:0006886 | 204 | 0.068 | |
| regulation of mitochondrial fission | GO:0090140 | 3 | 0.064 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.063 | |
| protein processing | GO:0016485 | 163 | 0.062 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.062 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.059 | |
| spermatid differentiation | GO:0048515 | 115 | 0.055 | |
| protein targeting | GO:0006605 | 143 | 0.054 | |
| transmembrane transport | GO:0055085 | 412 | 0.050 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.050 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.050 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.050 | |
| endocytosis | GO:0006897 | 168 | 0.050 | Worm |
| positive regulation of hydrolase activity | GO:0051345 | 148 | 0.050 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.049 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.046 | |
| protein maturation | GO:0051604 | 176 | 0.043 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.043 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.040 | |
| response to light stimulus | GO:0009416 | 135 | 0.040 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.040 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.039 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.038 | |
| sulfur compound biosynthetic process | GO:0044272 | 37 | 0.038 | |
| translation | GO:0006412 | 93 | 0.037 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.037 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.036 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.036 | |
| monocarboxylic acid metabolic process | GO:0032787 | 191 | 0.035 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.035 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.035 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.035 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.034 | |
| protein catabolic process | GO:0030163 | 221 | 0.034 | |
| multicellular organismal aging | GO:0010259 | 24 | 0.032 | Worm |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.032 | |
| protein targeting to peroxisome | GO:0006625 | 4 | 0.031 | |
| regulation of stress activated mapk cascade | GO:0032872 | 69 | 0.031 | |
| acetyl coa biosynthetic process from pyruvate | GO:0006086 | 3 | 0.031 | |
| neuron apoptotic process | GO:0051402 | 142 | 0.031 | |
| protein targeting to mitochondrion | GO:0006626 | 6 | 0.030 | |
| amine metabolic process | GO:0009308 | 45 | 0.030 | |
| peroxisomal transport | GO:0043574 | 4 | 0.030 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.030 | |
| protein localization to mitochondrion | GO:0070585 | 15 | 0.030 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.029 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.029 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.028 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.027 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.027 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.027 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.027 | |
| cellular homeostasis | GO:0019725 | 240 | 0.026 | |
| oxidation reduction process | GO:0055114 | 342 | 0.026 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.026 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.026 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 80 | 0.025 | |
| generation of precursor metabolites and energy | GO:0006091 | 103 | 0.025 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.025 | |
| atp metabolic process | GO:0046034 | 75 | 0.025 | |
| monocarboxylic acid biosynthetic process | GO:0072330 | 61 | 0.025 | |
| regulation of peptidase activity | GO:0052547 | 96 | 0.025 | |
| negative regulation of cell morphogenesis involved in differentiation | GO:0010771 | 48 | 0.025 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.025 | |
| protein oligomerization | GO:0051259 | 67 | 0.024 | |
| establishment of protein localization to peroxisome | GO:0072663 | 4 | 0.024 | |
| regulation of vesicle mediated transport | GO:0060627 | 139 | 0.024 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.024 | |
| tissue migration | GO:0090130 | 68 | 0.023 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.023 | |
| regulation of endopeptidase activity | GO:0052548 | 89 | 0.023 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.022 | |
| regulation of secretion | GO:0051046 | 274 | 0.022 | |
| sulfur compound metabolic process | GO:0006790 | 100 | 0.022 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.022 | |
| regulation of reactive oxygen species metabolic process | GO:2000377 | 40 | 0.021 | |
| guanosine containing compound metabolic process | GO:1901068 | 144 | 0.021 | |
| mitochondrion degradation | GO:0000422 | 3 | 0.021 | |
| cation homeostasis | GO:0055080 | 212 | 0.021 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.021 | |
| skeletal system development | GO:0001501 | 356 | 0.020 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 205 | 0.020 | |
| proteasomal protein catabolic process | GO:0010498 | 98 | 0.020 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.020 | |
| gland development | GO:0048732 | 330 | 0.019 | |
| gtp catabolic process | GO:0006184 | 143 | 0.019 | |
| mapk cascade | GO:0000165 | 281 | 0.019 | |
| response to transforming growth factor beta | GO:0071559 | 88 | 0.019 | |
| protein import into peroxisome matrix | GO:0016558 | 3 | 0.019 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.019 | |
| small molecule catabolic process | GO:0044282 | 71 | 0.018 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.018 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.018 | |
| forebrain development | GO:0030900 | 302 | 0.018 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.018 | |
| maintenance of location | GO:0051235 | 89 | 0.018 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.018 | |
| regulation of cellular response to growth factor stimulus | GO:0090287 | 82 | 0.017 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.017 | |
| gonad development | GO:0008406 | 141 | 0.017 | |
| localization within membrane | GO:0051668 | 4 | 0.017 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.017 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.017 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.017 | |
| response to growth factor | GO:0070848 | 198 | 0.017 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.017 | |
| cellular response to cytokine stimulus | GO:0071345 | 189 | 0.017 | |
| circulatory system process | GO:0003013 | 197 | 0.017 | |
| purine ribonucleoside catabolic process | GO:0046130 | 205 | 0.017 | |
| dephosphorylation | GO:0016311 | 129 | 0.017 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.017 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.016 | |
| peptide transport | GO:0015833 | 133 | 0.016 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 77 | 0.016 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.016 | |
| neuron neuron synaptic transmission | GO:0007270 | 69 | 0.016 | |
| amide transport | GO:0042886 | 138 | 0.016 | |
| regulation of secretion by cell | GO:1903530 | 249 | 0.016 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.016 | |
| cellular response to growth factor stimulus | GO:0071363 | 197 | 0.016 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.016 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.015 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.015 | |
| leukocyte proliferation | GO:0070661 | 172 | 0.015 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.015 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.015 | |
| coenzyme biosynthetic process | GO:0009108 | 23 | 0.015 | |
| cell adhesion | GO:0007155 | 329 | 0.015 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.015 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.015 | |
| camera type eye development | GO:0043010 | 266 | 0.015 | |
| mesenchymal cell differentiation | GO:0048762 | 107 | 0.015 | |
| response to oxidative stress | GO:0006979 | 123 | 0.015 | |
| inflammatory response | GO:0006954 | 244 | 0.015 | |
| muscle tissue development | GO:0060537 | 308 | 0.015 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.015 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.014 | |
| regulation of cell migration | GO:0030334 | 219 | 0.014 | |
| negative regulation of protein phosphorylation | GO:0001933 | 126 | 0.014 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 194 | 0.014 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.014 | |
| protein neddylation | GO:0045116 | 1 | 0.014 | |
| t cell activation | GO:0042110 | 289 | 0.014 | |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.014 | |
| metal ion homeostasis | GO:0055065 | 189 | 0.014 | |
| regulation of cysteine type endopeptidase activity involved in apoptotic process | GO:0043281 | 62 | 0.014 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.014 | |
| organelle fission | GO:0048285 | 170 | 0.014 | |
| centrosome separation | GO:0051299 | 4 | 0.014 | |
| phospholipid metabolic process | GO:0006644 | 87 | 0.014 | |
| carbohydrate homeostasis | GO:0033500 | 128 | 0.014 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.014 | |
| cell division | GO:0051301 | 120 | 0.014 | |
| regulation of cysteine type endopeptidase activity | GO:2000116 | 65 | 0.014 | |
| molting cycle | GO:0042303 | 90 | 0.013 | |
| protein secretion | GO:0009306 | 111 | 0.013 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.013 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.013 | |
| t cell proliferation | GO:0042098 | 120 | 0.013 | |
| positive regulation of secretion by cell | GO:1903532 | 114 | 0.013 | |
| telencephalon development | GO:0021537 | 186 | 0.013 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.013 | |
| blood circulation | GO:0008015 | 195 | 0.013 | |
| regulation of chromosome organization | GO:0033044 | 83 | 0.013 | |
| endomembrane system organization | GO:0010256 | 147 | 0.013 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.013 | |
| positive regulation of proteolysis involved in cellular protein catabolic process | GO:1903052 | 31 | 0.013 | |
| membrane organization | GO:0061024 | 245 | 0.013 | Worm |
| spermatogenesis | GO:0007283 | 284 | 0.013 | |
| vasodilation | GO:0042311 | 28 | 0.013 | |
| regulation of establishment of protein localization | GO:0070201 | 181 | 0.013 | |
| response to inorganic substance | GO:0010035 | 96 | 0.013 | |
| germ cell development | GO:0007281 | 185 | 0.013 | |
| regulation of peptide transport | GO:0090087 | 91 | 0.013 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 151 | 0.013 | |
| regulation of lipid metabolic process | GO:0019216 | 118 | 0.012 | |
| dna repair | GO:0006281 | 107 | 0.012 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.012 | |
| lipid localization | GO:0010876 | 126 | 0.012 | |
| guanosine containing compound catabolic process | GO:1901069 | 144 | 0.012 | |
| neuron death | GO:0070997 | 154 | 0.012 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.012 | |
| establishment of protein localization to mitochondrion | GO:0072655 | 11 | 0.012 | |
| exocytosis | GO:0006887 | 121 | 0.012 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.012 | |
| positive regulation of meiosis i | GO:0060903 | 5 | 0.012 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.012 | |
| protein import | GO:0017038 | 101 | 0.012 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.012 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.012 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.012 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.012 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.012 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.012 | |
| thioester biosynthetic process | GO:0035384 | 7 | 0.012 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.012 | |
| immune effector process | GO:0002252 | 321 | 0.011 | |
| regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045898 | 2 | 0.011 | |
| regulation of neuron apoptotic process | GO:0043523 | 122 | 0.011 | |
| histone modification | GO:0016570 | 159 | 0.011 | |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.011 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.011 | |
| acyl coa biosynthetic process | GO:0071616 | 7 | 0.011 | |
| lipid oxidation | GO:0034440 | 29 | 0.011 | |
| protein transmembrane transport | GO:0071806 | 8 | 0.011 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.011 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.011 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 88 | 0.011 | |
| retrograde transport endosome to golgi | GO:0042147 | 2 | 0.011 | |
| positive regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045899 | 2 | 0.011 | |
| protein localization to membrane | GO:0072657 | 108 | 0.011 | |
| hormone secretion | GO:0046879 | 128 | 0.011 | |
| regulation of cell motility | GO:2000145 | 236 | 0.011 | |
| organic hydroxy compound transport | GO:0015850 | 93 | 0.011 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 58 | 0.011 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.011 | |
| regulation of response to wounding | GO:1903034 | 189 | 0.011 | |
| regulation of cell activation | GO:0050865 | 289 | 0.011 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.011 | |
| phagocytosis | GO:0006909 | 66 | 0.011 | Worm |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.011 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.011 | |
| cation transport | GO:0006812 | 399 | 0.011 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.011 | |
| chromatin modification | GO:0016568 | 187 | 0.011 | |
| locomotory behavior | GO:0007626 | 195 | 0.011 | |
| stress activated mapk cascade | GO:0051403 | 80 | 0.011 | |
| endoplasmic reticulum organization | GO:0007029 | 10 | 0.010 | |
| positive regulation of secretion | GO:0051047 | 130 | 0.010 | |
| negative regulation of protein processing | GO:0010955 | 79 | 0.010 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 34 | 0.010 | |
| positive regulation of protein kinase activity | GO:0045860 | 144 | 0.010 | |
| lymphocyte proliferation | GO:0046651 | 164 | 0.010 | |
| glucose homeostasis | GO:0042593 | 128 | 0.010 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.010 | |
| negative regulation of cell cycle process | GO:0010948 | 69 | 0.010 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.010 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.010 | |
| canonical wnt signaling pathway | GO:0060070 | 130 | 0.010 | |
| lipid biosynthetic process | GO:0008610 | 179 | 0.010 | |
| cellular response to oxidative stress | GO:0034599 | 76 | 0.010 | |
| cerebral cortex development | GO:0021987 | 86 | 0.010 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.010 | |
