| monocarboxylic acid metabolic process | GO:0032787 | 191 | 0.963 | Rat |
| monocarboxylic acid catabolic process | GO:0072329 | 27 | 0.960 | Rat |
| cellular lipid catabolic process | GO:0044242 | 52 | 0.959 | Rat |
| thioester metabolic process | GO:0035383 | 19 | 0.949 | |
| fatty acid beta oxidation | GO:0006635 | 16 | 0.928 | Rat |
| acyl coa metabolic process | GO:0006637 | 19 | 0.925 | |
| lipid catabolic process | GO:0016042 | 69 | 0.920 | Rat |
| fatty acid oxidation | GO:0019395 | 28 | 0.899 | Rat |
| cofactor metabolic process | GO:0051186 | 80 | 0.853 | |
| lipid oxidation | GO:0034440 | 29 | 0.773 | Rat |
| fatty acid catabolic process | GO:0009062 | 25 | 0.708 | Rat |
| very long chain fatty acid catabolic process | GO:0042760 | 2 | 0.666 | |
| organic acid catabolic process | GO:0016054 | 51 | 0.655 | Rat |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.652 | Rat |
| carboxylic acid catabolic process | GO:0046395 | 51 | 0.623 | Rat |
| oxidation reduction process | GO:0055114 | 342 | 0.576 | Rat |
| coenzyme metabolic process | GO:0006732 | 52 | 0.518 | |
| small molecule catabolic process | GO:0044282 | 71 | 0.473 | Rat |
| very long chain fatty acid metabolic process | GO:0000038 | 8 | 0.465 | |
| fatty acid metabolic process | GO:0006631 | 121 | 0.454 | Rat |
| lipid modification | GO:0030258 | 65 | 0.379 | Rat |
| steroid metabolic process | GO:0008202 | 119 | 0.280 | |
| carnitine metabolic process | GO:0009437 | 7 | 0.246 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.230 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.227 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.195 | |
| sulfur compound metabolic process | GO:0006790 | 100 | 0.185 | |
| acetyl coa metabolic process | GO:0006084 | 8 | 0.184 | |
| protein oligomerization | GO:0051259 | 67 | 0.163 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.124 | |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.100 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.100 | |
| protein homooligomerization | GO:0051260 | 43 | 0.088 | |
| sterol metabolic process | GO:0016125 | 58 | 0.080 | |
| epithelial cell development | GO:0002064 | 159 | 0.079 | |
| carboxylic acid biosynthetic process | GO:0046394 | 86 | 0.073 | |
| hormone metabolic process | GO:0042445 | 86 | 0.069 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.063 | |
| saturated monocarboxylic acid metabolic process | GO:0032788 | 2 | 0.060 | |
| maintenance of location | GO:0051235 | 89 | 0.056 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.056 | |
| innate immune response | GO:0045087 | 157 | 0.054 | |
| amine metabolic process | GO:0009308 | 45 | 0.052 | |
| membrane organization | GO:0061024 | 245 | 0.050 | |
| coenzyme biosynthetic process | GO:0009108 | 23 | 0.050 | |
| anion transport | GO:0006820 | 177 | 0.049 | |
| fatty acid alpha oxidation | GO:0001561 | 2 | 0.049 | |
| lipid biosynthetic process | GO:0008610 | 179 | 0.047 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.040 | |
| development of primary male sexual characteristics | GO:0046546 | 88 | 0.040 | |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.040 | |
| male gonad development | GO:0008584 | 88 | 0.039 | |
| defense response to bacterium | GO:0042742 | 119 | 0.039 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.038 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.038 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.038 | |
| male sex differentiation | GO:0046661 | 109 | 0.036 | |
| androgen metabolic process | GO:0008209 | 11 | 0.036 | |
| protein tetramerization | GO:0051262 | 23 | 0.036 | |
| mitochondrial outer membrane permeabilization involved in programmed cell death | GO:1902686 | 11 | 0.034 | |
| alcohol metabolic process | GO:0006066 | 116 | 0.033 | |
| fatty acyl coa metabolic process | GO:0035337 | 4 | 0.033 | |
| gonad development | GO:0008406 | 141 | 0.033 | |
| apoptotic mitochondrial changes | GO:0008637 | 48 | 0.033 | |
| mitochondrion organization | GO:0007005 | 134 | 0.033 | |
| response to oxygen levels | GO:0070482 | 62 | 0.032 | |
| transmembrane transport | GO:0055085 | 412 | 0.031 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.031 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.030 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.030 | |
| cholesterol metabolic process | GO:0008203 | 56 | 0.030 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.029 | |
| regulation of fatty acid oxidation | GO:0046320 | 10 | 0.029 | |
| protein processing | GO:0016485 | 163 | 0.029 | |
| cofactor biosynthetic process | GO:0051188 | 41 | 0.029 | |
| response to oxygen radical | GO:0000305 | 16 | 0.028 | |
| succinyl coa metabolic process | GO:0006104 | 1 | 0.028 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.028 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.028 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.027 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.027 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.027 | |
| protein maturation | GO:0051604 | 176 | 0.026 | |
| regulation of lipid metabolic process | GO:0019216 | 118 | 0.026 | |
| defense response to gram negative bacterium | GO:0050829 | 28 | 0.025 | |
| monocarboxylic acid biosynthetic process | GO:0072330 | 61 | 0.025 | |
| lipid localization | GO:0010876 | 126 | 0.025 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.024 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.024 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.024 | |
| amino acid betaine metabolic process | GO:0006577 | 7 | 0.024 | |
| liver development | GO:0001889 | 66 | 0.024 | |
| ossification | GO:0001503 | 216 | 0.024 | |
| retinoid metabolic process | GO:0001523 | 24 | 0.024 | |
| cation transport | GO:0006812 | 399 | 0.023 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.022 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.022 | |
| organic anion transport | GO:0015711 | 137 | 0.022 | |
| defense response to other organism | GO:0098542 | 197 | 0.022 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.022 | |
| acylglycerol metabolic process | GO:0006639 | 55 | 0.022 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.021 | |
| response to hypoxia | GO:0001666 | 58 | 0.021 | |
| response to epidermal growth factor | GO:0070849 | 4 | 0.021 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.020 | |
| regulation of mitochondrion organization | GO:0010821 | 27 | 0.020 | |
| cellular response to lipid | GO:0071396 | 145 | 0.019 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.019 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.019 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.019 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.019 | |
| renal system development | GO:0072001 | 225 | 0.019 | |
| progesterone metabolic process | GO:0042448 | 4 | 0.019 | |
| response to decreased oxygen levels | GO:0036293 | 59 | 0.018 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.018 | |
| reactive nitrogen species metabolic process | GO:2001057 | 0 | 0.018 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.018 | |
| regulation of protein kinase activity | GO:0045859 | 232 | 0.018 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.018 | |
| diterpenoid metabolic process | GO:0016101 | 24 | 0.018 | |
| inflammatory response | GO:0006954 | 244 | 0.017 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.017 | |
| positive regulation of mitochondrial membrane permeability | GO:0035794 | 12 | 0.017 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.017 | |
| ethanol metabolic process | GO:0006067 | 3 | 0.017 | |
| response to nutrient levels | GO:0031667 | 109 | 0.017 | |
| pyruvate transport | GO:0006848 | 2 | 0.017 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.017 | |
| isoprenoid metabolic process | GO:0006720 | 29 | 0.017 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.017 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.017 | |
| action potential | GO:0001508 | 78 | 0.017 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.017 | |
| spermatogenesis | GO:0007283 | 284 | 0.017 | |
| negative regulation of protein processing | GO:0010955 | 79 | 0.016 | |
| kidney development | GO:0001822 | 213 | 0.016 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.016 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.016 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.016 | |
| response to starvation | GO:0042594 | 65 | 0.016 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.016 | |
| regulation of secretion | GO:0051046 | 274 | 0.016 | |
| fatty acid biosynthetic process | GO:0006633 | 41 | 0.016 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.015 | |
| estrogen metabolic process | GO:0008210 | 8 | 0.015 | |
| protein homotetramerization | GO:0051289 | 12 | 0.015 | |
| sulfur compound biosynthetic process | GO:0044272 | 37 | 0.015 | |
| cellular homeostasis | GO:0019725 | 240 | 0.015 | |
| cellular response to oxidative stress | GO:0034599 | 76 | 0.015 | |
| endomembrane system organization | GO:0010256 | 147 | 0.015 | |
| response to steroid hormone | GO:0048545 | 56 | 0.015 | |
| microtubule based process | GO:0007017 | 236 | 0.015 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.015 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.015 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.015 | |
| regulation of response to wounding | GO:1903034 | 189 | 0.014 | |
| synaptic transmission | GO:0007268 | 329 | 0.014 | |
| cellular ion homeostasis | GO:0006873 | 165 | 0.014 | |
| neuron death | GO:0070997 | 154 | 0.014 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.014 | |
| cellular amide metabolic process | GO:0043603 | 58 | 0.014 | |
| cellular modified amino acid metabolic process | GO:0006575 | 63 | 0.014 | |
| mitochondrial transport | GO:0006839 | 36 | 0.014 | |
| gland development | GO:0048732 | 330 | 0.014 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.014 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.014 | |
| transmission of nerve impulse | GO:0019226 | 76 | 0.014 | |
| metal ion homeostasis | GO:0055065 | 189 | 0.014 | |
| response to drug | GO:0042493 | 75 | 0.014 | |
| negative regulation of protein maturation | GO:1903318 | 79 | 0.013 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.013 | |
| cellular response to oxygen radical | GO:0071450 | 14 | 0.013 | |
| negative regulation of intracellular transport | GO:0032387 | 38 | 0.013 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.013 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.013 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.013 | |
| cellular alcohol biosynthetic process | GO:0044108 | 3 | 0.013 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.013 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.013 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.013 | |
| triglyceride metabolic process | GO:0006641 | 51 | 0.013 | |
| endocytosis | GO:0006897 | 168 | 0.013 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.013 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.013 | |
| regulation of secretion by cell | GO:1903530 | 249 | 0.013 | |
| multicellular organismal signaling | GO:0035637 | 91 | 0.012 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.012 | |
| response to inorganic substance | GO:0010035 | 96 | 0.012 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.012 | |
| negative regulation of immune system process | GO:0002683 | 209 | 0.012 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.012 | |
| cation homeostasis | GO:0055080 | 212 | 0.012 | |
| cellular response to biotic stimulus | GO:0071216 | 92 | 0.012 | |
| fat cell differentiation | GO:0045444 | 160 | 0.012 | |
| extracellular structure organization | GO:0043062 | 148 | 0.012 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.012 | |
| glycerophospholipid metabolic process | GO:0006650 | 71 | 0.012 | |
| male gamete generation | GO:0048232 | 285 | 0.012 | |
| regulation of transferase activity | GO:0051338 | 263 | 0.012 | |
| regulation of body fluid levels | GO:0050878 | 162 | 0.012 | |
| positive regulation of secretion by cell | GO:1903532 | 114 | 0.012 | |
| cellular response to molecule of bacterial origin | GO:0071219 | 83 | 0.012 | |
| phospholipid metabolic process | GO:0006644 | 87 | 0.012 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.012 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.012 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 77 | 0.012 | |
| cellular aldehyde metabolic process | GO:0006081 | 12 | 0.012 | |
| regulation of fatty acid beta oxidation | GO:0031998 | 1 | 0.012 | |
| organic hydroxy compound biosynthetic process | GO:1901617 | 77 | 0.012 | |
| regulation of cholesterol metabolic process | GO:0090181 | 14 | 0.012 | |
| regulation of neuron death | GO:1901214 | 134 | 0.012 | |
| circulatory system process | GO:0003013 | 197 | 0.012 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.012 | |
| positive regulation of reactive oxygen species metabolic process | GO:2000379 | 11 | 0.012 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.012 | |
| generation of precursor metabolites and energy | GO:0006091 | 103 | 0.012 | |
| regulation of reactive oxygen species metabolic process | GO:2000377 | 40 | 0.012 | |
| organic hydroxy compound transport | GO:0015850 | 93 | 0.012 | |
| negative regulation of fatty acid metabolic process | GO:0045922 | 10 | 0.011 | |
| regulation of cell activation | GO:0050865 | 289 | 0.011 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.011 | |
| response to oxidative stress | GO:0006979 | 123 | 0.011 | |
| regulation of cytokine production | GO:0001817 | 266 | 0.011 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.011 | |
| cytokine production | GO:0001816 | 319 | 0.011 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.011 | |
| regulation of defense response | GO:0031347 | 233 | 0.011 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.011 | |
| response to reactive oxygen species | GO:0000302 | 56 | 0.011 | |
| porphyrin containing compound metabolic process | GO:0006778 | 22 | 0.011 | |
| sensory perception | GO:0007600 | 245 | 0.011 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.011 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.011 | |
| regulation of phosphatidylcholine catabolic process | GO:0010899 | 2 | 0.011 | |
| positive regulation of protein serine threonine kinase activity | GO:0071902 | 106 | 0.011 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.011 | |
| protein import | GO:0017038 | 101 | 0.011 | |
| lipid storage | GO:0019915 | 36 | 0.011 | |
| divalent inorganic cation homeostasis | GO:0072507 | 138 | 0.011 | |
| regulation of removal of superoxide radicals | GO:2000121 | 4 | 0.011 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.011 | |
| fatty acid transmembrane transport | GO:1902001 | 1 | 0.011 | |
| response to metal ion | GO:0010038 | 47 | 0.011 | |
| skin development | GO:0043588 | 220 | 0.011 | |
| positive regulation of kinase activity | GO:0033674 | 155 | 0.011 | |
| neuronal action potential | GO:0019228 | 54 | 0.011 | |
| immune effector process | GO:0002252 | 321 | 0.010 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.010 | |
| negative regulation of cellular amino acid metabolic process | GO:0045763 | 0 | 0.010 | |
| epithelial tube morphogenesis | GO:0060562 | 303 | 0.010 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 73 | 0.010 | |
| water soluble vitamin biosynthetic process | GO:0042364 | 3 | 0.010 | |
| activation of immune response | GO:0002253 | 138 | 0.010 | |
| acetate metabolic process | GO:0006083 | 1 | 0.010 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.010 | |
| negative regulation of neuron apoptotic process | GO:0043524 | 92 | 0.010 | |
| citrate metabolic process | GO:0006101 | 3 | 0.010 | |
| regulation of neuron apoptotic process | GO:0043523 | 122 | 0.010 | |
| neural tube formation | GO:0001841 | 108 | 0.010 | |
| hexose metabolic process | GO:0019318 | 98 | 0.010 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.010 | |