| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.997 | Mouse Fly |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.992 | Mouse Fly |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.991 | Mouse Fly |
| alternative mrna splicing via spliceosome | GO:0000380 | 12 | 0.987 | Fly |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.986 | Mouse Fly |
| mrna processing | GO:0006397 | 63 | 0.976 | Mouse Fly |
| rna processing | GO:0006396 | 105 | 0.963 | Mouse Fly |
| negative regulation of rna splicing | GO:0033119 | 12 | 0.952 | Fly |
| regulation of mrna processing | GO:0050684 | 41 | 0.950 | Mouse Fly |
| mrna metabolic process | GO:0016071 | 84 | 0.937 | Mouse Fly |
| rna splicing | GO:0008380 | 54 | 0.936 | Mouse Fly |
| spermatogenesis | GO:0007283 | 284 | 0.935 | Mouse |
| regulation of rna splicing | GO:0043484 | 37 | 0.931 | Mouse Fly |
| 3 utr mediated mrna stabilization | GO:0070935 | 2 | 0.901 | |
| spermatid differentiation | GO:0048515 | 115 | 0.882 | |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 12 | 0.874 | |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.873 | Mouse Fly |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 8 | 0.840 | Fly |
| negative regulation of mrna processing | GO:0050686 | 12 | 0.807 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.768 | Mouse |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.742 | Mouse |
| translation | GO:0006412 | 93 | 0.724 | |
| nuclear division | GO:0000280 | 158 | 0.688 | |
| stem cell development | GO:0048864 | 219 | 0.684 | Mouse |
| mrna stabilization | GO:0048255 | 9 | 0.658 | |
| male gamete generation | GO:0048232 | 285 | 0.633 | Mouse |
| spermatid development | GO:0007286 | 108 | 0.600 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.591 | |
| organelle fission | GO:0048285 | 170 | 0.534 | |
| establishment or maintenance of microtubule cytoskeleton polarity | GO:0030951 | 1 | 0.439 | Fly |
| negative regulation of mrna metabolic process | GO:1903312 | 13 | 0.406 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.396 | |
| rna stabilization | GO:0043489 | 9 | 0.395 | |
| mesenchyme development | GO:0060485 | 152 | 0.370 | Mouse |
| gonad development | GO:0008406 | 141 | 0.339 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.331 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.306 | |
| response to heat | GO:0009408 | 27 | 0.287 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.287 | |
| multicellular organism growth | GO:0035264 | 161 | 0.276 | |
| regulation of translation | GO:0006417 | 71 | 0.263 | |
| regulation of rna stability | GO:0043487 | 26 | 0.249 | Mouse |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.214 | |
| mesenchymal cell differentiation | GO:0048762 | 107 | 0.211 | Mouse |
| response to extracellular stimulus | GO:0009991 | 127 | 0.189 | |
| oogenesis | GO:0048477 | 56 | 0.186 | Fly |
| dna repair | GO:0006281 | 107 | 0.184 | |
| oocyte construction | GO:0007308 | 2 | 0.181 | Fly |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.180 | |
| spliceosomal complex assembly | GO:0000245 | 6 | 0.174 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.164 | |
| germ cell development | GO:0007281 | 185 | 0.163 | Fly |
| inflammatory response | GO:0006954 | 244 | 0.160 | |
| pole plasm assembly | GO:0007315 | 2 | 0.159 | Fly |
| mitotic cell cycle | GO:0000278 | 195 | 0.152 | |
| response to temperature stimulus | GO:0009266 | 55 | 0.149 | |
| positive regulation of translation | GO:0045727 | 19 | 0.139 | |
| negative regulation of phagocytosis | GO:0050765 | 4 | 0.130 | |
| stem cell differentiation | GO:0048863 | 268 | 0.128 | Mouse |
| positive regulation of rna splicing | GO:0033120 | 12 | 0.125 | Mouse |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.123 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.111 | |
| development of primary female sexual characteristics | GO:0046545 | 73 | 0.110 | |
| compound eye development | GO:0048749 | 1 | 0.109 | |
| female gonad development | GO:0008585 | 71 | 0.109 | |
| genitalia development | GO:0048806 | 37 | 0.101 | |
| adult locomotory behavior | GO:0008344 | 91 | 0.100 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.099 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.097 | |
| trna processing | GO:0008033 | 11 | 0.096 | |
| regulation of response to dna damage stimulus | GO:2001020 | 34 | 0.094 | |
| neural crest cell differentiation | GO:0014033 | 54 | 0.091 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.090 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.089 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.087 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.085 | |
| rna interference | GO:0016246 | 2 | 0.085 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.085 | |
| cell junction organization | GO:0034330 | 77 | 0.083 | |
| gene silencing by rna | GO:0031047 | 19 | 0.082 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.080 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.079 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.077 | |
| intracellular mrna localization | GO:0008298 | 4 | 0.076 | Fly |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.074 | |
| body morphogenesis | GO:0010171 | 45 | 0.073 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.073 | |
| response to nutrient levels | GO:0031667 | 109 | 0.072 | |
| positive regulation of mrna splicing via spliceosome | GO:0048026 | 11 | 0.071 | Mouse |
| cell substrate junction assembly | GO:0007044 | 24 | 0.070 | |
| regulation of synapse assembly | GO:0051963 | 29 | 0.069 | |
| rna transport | GO:0050658 | 18 | 0.068 | |
| ossification | GO:0001503 | 216 | 0.063 | |
| amine metabolic process | GO:0009308 | 45 | 0.063 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 2 | 0.063 | Fly |
| response to organic cyclic compound | GO:0014070 | 198 | 0.063 | |
| dna metabolic process | GO:0006259 | 303 | 0.062 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.061 | |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.061 | |
| mesenchymal cell development | GO:0014031 | 93 | 0.058 | Mouse |
| nucleoside metabolic process | GO:0009116 | 246 | 0.056 | |
| axonogenesis | GO:0007409 | 274 | 0.055 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.055 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.052 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.052 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.051 | |
| negative regulation of nervous system development | GO:0051961 | 156 | 0.051 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.050 | |
| protein acylation | GO:0043543 | 64 | 0.049 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.048 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.048 | |
| oocyte development | GO:0048599 | 33 | 0.047 | Fly |
| cell division | GO:0051301 | 120 | 0.047 | |
| epithelial to mesenchymal transition | GO:0001837 | 47 | 0.046 | Mouse |
| negative regulation of keratinocyte differentiation | GO:0045617 | 4 | 0.046 | |
| female sex differentiation | GO:0046660 | 84 | 0.044 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.044 | |
| chromatin organization | GO:0006325 | 206 | 0.043 | |
| cellular response to cytokine stimulus | GO:0071345 | 189 | 0.043 | |
| developmental cell growth | GO:0048588 | 84 | 0.042 | |
| neuron projection extension | GO:1990138 | 64 | 0.041 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.039 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.039 | |
| positive regulation of intracellular estrogen receptor signaling pathway | GO:0033148 | 4 | 0.038 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.038 | |
| positive regulation of synaptic growth at neuromuscular junction | GO:0045887 | 1 | 0.038 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.037 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.037 | |
| lung development | GO:0030324 | 164 | 0.036 | |
| regulation of receptor biosynthetic process | GO:0010869 | 2 | 0.036 | |
| regulation of keratinocyte proliferation | GO:0010837 | 15 | 0.036 | |
| carboxylic acid biosynthetic process | GO:0046394 | 86 | 0.035 | |
| protein catabolic process | GO:0030163 | 221 | 0.034 | |
| female gamete generation | GO:0007292 | 74 | 0.034 | Fly |
| lung morphogenesis | GO:0060425 | 50 | 0.034 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.034 | |
| skin development | GO:0043588 | 220 | 0.034 | |
| germ line stem cell maintenance | GO:0030718 | 6 | 0.033 | |
| respiratory system development | GO:0060541 | 190 | 0.033 | |
| nucleic acid transport | GO:0050657 | 18 | 0.032 | |
| positive regulation of growth | GO:0045927 | 104 | 0.032 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.031 | |
| cell growth | GO:0016049 | 130 | 0.031 | |
| calcium ion transport | GO:0006816 | 159 | 0.031 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.031 | |
| negative regulation of growth | GO:0045926 | 99 | 0.030 | |
| fatty acid metabolic process | GO:0006631 | 121 | 0.030 | |
| maternal placenta development | GO:0001893 | 20 | 0.029 | Mouse |
| meiotic cell cycle | GO:0051321 | 122 | 0.028 | |
| gene silencing | GO:0016458 | 38 | 0.028 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.027 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.027 | |
| multicellular organismal aging | GO:0010259 | 24 | 0.027 | |
| negative regulation of cell activation | GO:0050866 | 111 | 0.027 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.026 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.026 | |
| negative regulation of synapse assembly | GO:0051964 | 3 | 0.026 | |
| stem cell maintenance | GO:0019827 | 130 | 0.026 | |
| ribosomal small subunit biogenesis | GO:0042274 | 4 | 0.025 | |
| antimicrobial peptide biosynthetic process | GO:0002777 | 2 | 0.025 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.025 | |
| posttranscriptional gene silencing | GO:0016441 | 10 | 0.025 | |
| protein complex disassembly | GO:0043241 | 40 | 0.025 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.024 | |
| regulation of intrinsic apoptotic signaling pathway by p53 class mediator | GO:1902253 | 13 | 0.024 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.024 | |
| regulation of cell division | GO:0051302 | 76 | 0.024 | |
| positive regulation of transferase activity | GO:0051347 | 167 | 0.024 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.024 | |
| ncrna processing | GO:0034470 | 26 | 0.023 | |
| nuclear transport | GO:0051169 | 139 | 0.023 | |
| rna localization | GO:0006403 | 23 | 0.022 | Fly |
| regulation of circadian rhythm | GO:0042752 | 58 | 0.022 | |
| meiotic cell cycle process | GO:1903046 | 77 | 0.022 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 94 | 0.022 | |
| synapse organization | GO:0050808 | 125 | 0.021 | |
| mrna splice site selection | GO:0006376 | 5 | 0.021 | |
| respiratory tube development | GO:0030323 | 167 | 0.021 | |
| adult behavior | GO:0030534 | 135 | 0.020 | |
| innate immune response | GO:0045087 | 157 | 0.020 | |
| positive regulation of cellular catabolic process | GO:0031331 | 148 | 0.020 | |
| maternal process involved in female pregnancy | GO:0060135 | 32 | 0.019 | Mouse |
| regulation of plasma lipoprotein particle levels | GO:0097006 | 23 | 0.019 | |
| regulation of epidermal cell differentiation | GO:0045604 | 21 | 0.019 | |
| locomotory behavior | GO:0007626 | 195 | 0.019 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.019 | |
| regulation of cysteine type endopeptidase activity involved in apoptotic process | GO:0043281 | 62 | 0.019 | |
| monocarboxylic acid biosynthetic process | GO:0072330 | 61 | 0.018 | |
| gland development | GO:0048732 | 330 | 0.018 | |
| regulation of cell activation | GO:0050865 | 289 | 0.018 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.018 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.018 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.018 | Fly |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.018 | |
| l amino acid transport | GO:0015807 | 32 | 0.017 | |
| regulation of endopeptidase activity | GO:0052548 | 89 | 0.017 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.017 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.017 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.017 | |
| regulation of rna export from nucleus | GO:0046831 | 4 | 0.017 | |
| interspecies interaction between organisms | GO:0044419 | 83 | 0.017 | |
| carbohydrate metabolic process | GO:0005975 | 230 | 0.017 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.017 | |
| microtubule nucleation | GO:0007020 | 2 | 0.017 | |
| regulation of carbohydrate metabolic process | GO:0006109 | 75 | 0.016 | |
| receptor biosynthetic process | GO:0032800 | 3 | 0.016 | |
| epidermis development | GO:0008544 | 187 | 0.016 | |
| maturation of ssu rrna | GO:0030490 | 1 | 0.016 | |
| developmental maturation | GO:0021700 | 193 | 0.016 | Fly |
| lipid localization | GO:0010876 | 126 | 0.015 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.015 | |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.015 | |
| glucose metabolic process | GO:0006006 | 92 | 0.015 | |
| extrinsic apoptotic signaling pathway via death domain receptors | GO:0008625 | 34 | 0.015 | |
| negative regulation of lymphocyte activation | GO:0051250 | 91 | 0.015 | |
| developmental growth involved in morphogenesis | GO:0060560 | 138 | 0.015 | |
| synapse assembly | GO:0007416 | 56 | 0.015 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.015 | |
| male meiosis i | GO:0007141 | 16 | 0.015 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.015 | |
| positive regulation of glycogen catabolic process | GO:0045819 | 2 | 0.015 | |
| circadian regulation of translation | GO:0097167 | 3 | 0.014 | |
| regulation of dna templated transcription termination | GO:0031554 | 1 | 0.014 | |
| positive regulation of epithelial cell proliferation | GO:0050679 | 68 | 0.014 | |
| microtubule based process | GO:0007017 | 236 | 0.014 | Fly |
| humoral immune response | GO:0006959 | 57 | 0.014 | |
| transmembrane transport | GO:0055085 | 412 | 0.014 | |
| skeletal muscle cell differentiation | GO:0035914 | 66 | 0.014 | |
| mrna localization resulting in posttranscriptional regulation of gene expression | GO:0010609 | 2 | 0.014 | |
| circadian rhythm | GO:0007623 | 114 | 0.014 | |
| rna modification | GO:0009451 | 20 | 0.013 | |
| regionalization | GO:0003002 | 337 | 0.013 | Fly |
| skeletal system development | GO:0001501 | 356 | 0.013 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.013 | |
| cellular response to organic cyclic compound | GO:0071407 | 87 | 0.013 | |
| regulation of binding | GO:0051098 | 111 | 0.012 | |
| dna packaging | GO:0006323 | 30 | 0.012 | |
| regulation of organ morphogenesis | GO:2000027 | 144 | 0.012 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.012 | |
| positive regulation of mapk cascade | GO:0043410 | 170 | 0.012 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.012 | |
| peripheral nervous system neuron axonogenesis | GO:0048936 | 3 | 0.012 | |
| calcium ion transmembrane transport | GO:0070588 | 85 | 0.012 | |
| phagocytosis | GO:0006909 | 66 | 0.012 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.012 | Fly |
| negative regulation of immune system process | GO:0002683 | 209 | 0.012 | |
| protein maturation | GO:0051604 | 176 | 0.012 | |
| synaptic growth at neuromuscular junction | GO:0051124 | 6 | 0.012 | |
| regulation of glucose metabolic process | GO:0010906 | 60 | 0.011 | |
| platelet derived growth factor receptor beta signaling pathway | GO:0035791 | 4 | 0.011 | |
| regulation of transferase activity | GO:0051338 | 263 | 0.011 | |
| response to starvation | GO:0042594 | 65 | 0.011 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.011 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.011 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.011 | |
| positive regulation of cysteine type endopeptidase activity | GO:2001056 | 39 | 0.011 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.011 | |
| regulation of low density lipoprotein particle receptor biosynthetic process | GO:0045714 | 2 | 0.011 | |
| synapse assembly involved in innervation | GO:0060386 | 1 | 0.011 | |
| cation transport | GO:0006812 | 399 | 0.011 | |
| lipid transport | GO:0006869 | 98 | 0.011 | |
| regulation of response to wounding | GO:1903034 | 189 | 0.010 | |
| negative regulation of extrinsic apoptotic signaling pathway | GO:2001237 | 45 | 0.010 | |
| positive regulation of chromosome organization | GO:2001252 | 33 | 0.010 | |
| ribonucleoside catabolic process | GO:0042454 | 206 | 0.010 | |
| negative regulation of lymphocyte differentiation | GO:0045620 | 32 | 0.010 | |
| positive regulation of histone methylation | GO:0031062 | 16 | 0.010 | |
| histone acetylation | GO:0016573 | 41 | 0.010 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.010 | |
| positive regulation of intrinsic apoptotic signaling pathway | GO:2001244 | 25 | 0.010 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.010 | |
| positive regulation of translational initiation | GO:0045948 | 4 | 0.010 | |
