| cilium assembly | GO:0042384 | 81 | 0.954 | |
| cilium morphogenesis | GO:0060271 | 102 | 0.947 | |
| intraciliary transport | GO:0042073 | 9 | 0.645 | |
| organelle assembly | GO:0070925 | 177 | 0.544 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 139 | 0.540 | |
| intraciliary retrograde transport | GO:0035721 | 3 | 0.382 | |
| microtubule based process | GO:0007017 | 236 | 0.212 | |
| smoothened signaling pathway | GO:0007224 | 105 | 0.202 | |
| cytoskeleton dependent intracellular transport | GO:0030705 | 50 | 0.189 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.143 | |
| microtubule based movement | GO:0007018 | 84 | 0.131 | |
| regulation of cilium assembly | GO:1902017 | 7 | 0.129 | |
| protein maturation | GO:0051604 | 176 | 0.114 | |
| microtubule based transport | GO:0010970 | 50 | 0.091 | |
| neural tube development | GO:0021915 | 160 | 0.090 | |
| sensory organ morphogenesis | GO:0090596 | 242 | 0.075 | Zebrafish |
| regionalization | GO:0003002 | 337 | 0.070 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.067 | |
| dna metabolic process | GO:0006259 | 303 | 0.065 | |
| epithelial cilium movement | GO:0003351 | 12 | 0.064 | |
| regulation of microtubule based process | GO:0032886 | 52 | 0.060 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.058 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.055 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.054 | |
| camera type eye development | GO:0043010 | 266 | 0.053 | Zebrafish |
| fat cell differentiation | GO:0045444 | 160 | 0.053 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.049 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.049 | |
| amine metabolic process | GO:0009308 | 45 | 0.049 | |
| regulation of smoothened signaling pathway | GO:0008589 | 58 | 0.047 | |
| eye photoreceptor cell differentiation | GO:0001754 | 41 | 0.046 | |
| telencephalon development | GO:0021537 | 186 | 0.044 | |
| spermatogenesis | GO:0007283 | 284 | 0.044 | |
| forebrain development | GO:0030900 | 302 | 0.043 | |
| axoneme assembly | GO:0035082 | 15 | 0.042 | |
| regulation of protein maturation | GO:1903317 | 96 | 0.042 | |
| photoreceptor cell differentiation | GO:0046530 | 52 | 0.042 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.040 | |
| organelle localization | GO:0051640 | 179 | 0.039 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.039 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.039 | |
| spermatid development | GO:0007286 | 108 | 0.039 | |
| neural tube formation | GO:0001841 | 108 | 0.038 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.038 | |
| limb morphogenesis | GO:0035108 | 149 | 0.037 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.037 | |
| protein processing | GO:0016485 | 163 | 0.037 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.036 | |
| germ cell development | GO:0007281 | 185 | 0.036 | |
| nonmotile primary cilium assembly | GO:0035058 | 8 | 0.035 | |
| protein catabolic process | GO:0030163 | 221 | 0.035 | |
| retina development in camera type eye | GO:0060041 | 119 | 0.034 | Zebrafish |
| regulation of protein processing | GO:0070613 | 96 | 0.034 | |
| embryonic appendage morphogenesis | GO:0035113 | 126 | 0.034 | |
| organelle fission | GO:0048285 | 170 | 0.032 | |
| tube formation | GO:0035148 | 140 | 0.032 | |
| eye photoreceptor cell development | GO:0042462 | 31 | 0.031 | |
| spermatid differentiation | GO:0048515 | 115 | 0.031 | |
| microtubule organizing center organization | GO:0031023 | 28 | 0.031 | |
| spinal cord development | GO:0021510 | 81 | 0.031 | |
| nuclear division | GO:0000280 | 158 | 0.031 | |
| spinal cord dorsal ventral patterning | GO:0021513 | 23 | 0.031 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.031 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.030 | |
| male gamete generation | GO:0048232 | 285 | 0.030 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.030 | |
| epithelial tube formation | GO:0072175 | 130 | 0.029 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.029 | |
| embryonic digit morphogenesis | GO:0042733 | 56 | 0.028 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.028 | |
| photoreceptor cell development | GO:0042461 | 40 | 0.028 | |
| epithelial tube morphogenesis | GO:0060562 | 303 | 0.028 | |
| proteasomal protein catabolic process | GO:0010498 | 98 | 0.028 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.028 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.027 | |
| appendage morphogenesis | GO:0035107 | 149 | 0.027 | |
| protein ubiquitination | GO:0016567 | 171 | 0.027 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 3 | 0.027 | |
| embryonic limb morphogenesis | GO:0030326 | 126 | 0.026 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 4 | 0.026 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.026 | |
| urogenital system development | GO:0001655 | 261 | 0.025 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.025 | |
| modification dependent protein catabolic process | GO:0019941 | 133 | 0.025 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.025 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.025 | |
| sensory perception of sound | GO:0007605 | 97 | 0.024 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.024 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.024 | |
| regulation of fat cell differentiation | GO:0045598 | 81 | 0.024 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 88 | 0.024 | |
| carbohydrate homeostasis | GO:0033500 | 128 | 0.024 | |
| retina morphogenesis in camera type eye | GO:0060042 | 45 | 0.023 | Zebrafish |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.023 | |
| sensory perception | GO:0007600 | 245 | 0.023 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.022 | |
| transmembrane transport | GO:0055085 | 412 | 0.022 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.022 | |
| cell division | GO:0051301 | 120 | 0.022 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.022 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.021 | |
| ear development | GO:0043583 | 200 | 0.021 | |
| glucose homeostasis | GO:0042593 | 128 | 0.021 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.021 | |
| endomembrane system organization | GO:0010256 | 147 | 0.021 | |
| skin development | GO:0043588 | 220 | 0.020 | |
| adult behavior | GO:0030534 | 135 | 0.020 | |
| skeletal system development | GO:0001501 | 356 | 0.020 | |
| metencephalon development | GO:0022037 | 89 | 0.020 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.020 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.020 | |
| limb development | GO:0060173 | 166 | 0.020 | |
| appendage development | GO:0048736 | 166 | 0.020 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.020 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.020 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.020 | |
| respiratory system development | GO:0060541 | 190 | 0.019 | |
| spinal cord patterning | GO:0021511 | 25 | 0.019 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.019 | |
| renal system development | GO:0072001 | 225 | 0.019 | |
| centrosome organization | GO:0051297 | 26 | 0.019 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.019 | |
| primary neural tube formation | GO:0014020 | 95 | 0.019 | |
| regulation of protein catabolic process | GO:0042176 | 108 | 0.019 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.019 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.019 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.019 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.019 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 37 | 0.018 | |
| muscle tissue development | GO:0060537 | 308 | 0.018 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.018 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.018 | |
| methylation | GO:0032259 | 134 | 0.018 | |
| b cell activation | GO:0042113 | 161 | 0.018 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 159 | 0.018 | |
| nucleoside catabolic process | GO:0009164 | 206 | 0.018 | |
| cerebellum development | GO:0021549 | 77 | 0.018 | |
| embryonic organ morphogenesis | GO:0048562 | 276 | 0.018 | |
| lymphocyte differentiation | GO:0030098 | 242 | 0.018 | |
| regulation of cell activation | GO:0050865 | 289 | 0.018 | |
| hindbrain development | GO:0030902 | 128 | 0.018 | |
| centrosome cycle | GO:0007098 | 23 | 0.017 | |
| intracellular protein transport | GO:0006886 | 204 | 0.017 | |
| protein localization to organelle | GO:0033365 | 185 | 0.017 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.017 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.017 | |
| chromosome organization involved in meiosis | GO:0070192 | 39 | 0.017 | |
| cellular homeostasis | GO:0019725 | 240 | 0.017 | |
| determination of left right symmetry | GO:0007368 | 80 | 0.017 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.017 | |
| sensory perception of mechanical stimulus | GO:0050954 | 107 | 0.017 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.016 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.016 | |
| response to radiation | GO:0009314 | 165 | 0.016 | |
| negative regulation of nervous system development | GO:0051961 | 156 | 0.016 | |
| lymphocyte mediated immunity | GO:0002449 | 139 | 0.016 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.016 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.016 | |
| chemotaxis | GO:0006935 | 247 | 0.016 | Worm |
| positive regulation of cell development | GO:0010720 | 237 | 0.016 | |
| carbohydrate derivative catabolic process | GO:1901136 | 231 | 0.016 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.015 | |
| cation transport | GO:0006812 | 399 | 0.015 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.015 | |
| photoreceptor cell maintenance | GO:0045494 | 19 | 0.015 | |
| chromatin modification | GO:0016568 | 187 | 0.015 | |
| chromatin organization | GO:0006325 | 206 | 0.015 | |
| meiotic cell cycle process | GO:1903046 | 77 | 0.015 | |
| epithelial cell development | GO:0002064 | 159 | 0.015 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.015 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.015 | |
| membrane organization | GO:0061024 | 245 | 0.015 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.015 | |
| response to oxidative stress | GO:0006979 | 123 | 0.015 | |
| immune effector process | GO:0002252 | 321 | 0.015 | |
| response to light stimulus | GO:0009416 | 135 | 0.015 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.015 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.015 | |
| regulation of microtubule polymerization or depolymerization | GO:0031110 | 20 | 0.015 | |
| neural tube patterning | GO:0021532 | 43 | 0.014 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.014 | |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.014 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.014 | |
| rhythmic process | GO:0048511 | 174 | 0.014 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.014 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 129 | 0.014 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.014 | |
| pancreas development | GO:0031016 | 57 | 0.014 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.014 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.014 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.014 | |
| digestive tract morphogenesis | GO:0048546 | 147 | 0.014 | |
| response to insulin | GO:0032868 | 100 | 0.014 | |
| t cell activation | GO:0042110 | 289 | 0.014 | |
| lung development | GO:0030324 | 164 | 0.014 | |
| b cell differentiation | GO:0030183 | 78 | 0.014 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.014 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.014 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.014 | |
| positive regulation of cell cycle process | GO:0090068 | 61 | 0.013 | |
| cilium movement | GO:0003341 | 28 | 0.013 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.013 | |
| axonogenesis | GO:0007409 | 274 | 0.013 | |
| notch signaling pathway | GO:0007219 | 71 | 0.013 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.013 | |
| centrosome duplication | GO:0051298 | 16 | 0.013 | |
| regulation of t cell activation | GO:0050863 | 170 | 0.013 | |
| gastrulation | GO:0007369 | 116 | 0.013 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.013 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.013 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.013 | |
| sister chromatid segregation | GO:0000819 | 20 | 0.013 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.013 | |
| regulation of neuron projection development | GO:0010975 | 169 | 0.013 | |
| digestive tract development | GO:0048565 | 190 | 0.013 | |
| peptide transport | GO:0015833 | 133 | 0.013 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.012 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.012 | |
| cerebellar cortex development | GO:0021695 | 48 | 0.012 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.012 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.012 | |
| protein dna complex subunit organization | GO:0071824 | 28 | 0.012 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.012 | |
| neural retina development | GO:0003407 | 41 | 0.012 | |
| neuron death | GO:0070997 | 154 | 0.012 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.012 | |
| cellular response to gamma radiation | GO:0071480 | 4 | 0.012 | |
| substantia nigra development | GO:0021762 | 2 | 0.012 | |
| macromolecule methylation | GO:0043414 | 120 | 0.012 | |
| spermatid nucleus differentiation | GO:0007289 | 19 | 0.012 | |
| vesicle localization | GO:0051648 | 86 | 0.012 | |
| cytoplasmic microtubule organization | GO:0031122 | 14 | 0.012 | |
| microtubule polymerization or depolymerization | GO:0031109 | 26 | 0.012 | |
| digestive system development | GO:0055123 | 200 | 0.012 | |
| heart morphogenesis | GO:0003007 | 178 | 0.012 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.012 | |
| adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | GO:0002460 | 145 | 0.012 | |
| olfactory learning | GO:0008355 | 2 | 0.011 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.011 | |
| regulation of neuron differentiation | GO:0045664 | 281 | 0.011 | |
| peptide hormone secretion | GO:0030072 | 109 | 0.011 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.011 | |
| protein polymerization | GO:0051258 | 57 | 0.011 | |
| gland development | GO:0048732 | 330 | 0.011 | |
| positive regulation of smoothened signaling pathway | GO:0045880 | 23 | 0.011 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.011 | |
| dna repair | GO:0006281 | 107 | 0.011 | |
| cellular response to peptide hormone stimulus | GO:0071375 | 92 | 0.011 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.011 | |
| nucleus organization | GO:0006997 | 45 | 0.011 | |
| peptide secretion | GO:0002790 | 114 | 0.011 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.011 | |
| response to peptide hormone | GO:0043434 | 127 | 0.011 | |
| morphogenesis of a polarized epithelium | GO:0001738 | 37 | 0.011 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.011 | |
| regulation of secretion | GO:0051046 | 274 | 0.011 | |
| regulation of lymphocyte differentiation | GO:0045619 | 107 | 0.011 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 85 | 0.011 | |
| negative regulation of proteolysis | GO:0045861 | 74 | 0.011 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.011 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.011 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.011 | |
| neural tube closure | GO:0001843 | 90 | 0.011 | |
| negative regulation of t helper 2 cell differentiation | GO:0045629 | 4 | 0.011 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.011 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.011 | |
| neuron apoptotic process | GO:0051402 | 142 | 0.010 | |
| kidney development | GO:0001822 | 213 | 0.010 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.010 | |
| centriole assembly | GO:0098534 | 6 | 0.010 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 199 | 0.010 | |
| positive regulation of lymphocyte activation | GO:0051251 | 140 | 0.010 | |
| insulin secretion | GO:0030073 | 89 | 0.010 | |
| negative regulation of cell cycle process | GO:0010948 | 69 | 0.010 | |
| negative regulation of cell cycle | GO:0045786 | 123 | 0.010 | |
| left right pattern formation | GO:0060972 | 23 | 0.010 | |
| purine nucleoside catabolic process | GO:0006152 | 205 | 0.010 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.010 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 57 | 0.010 | |
| sodium ion transport | GO:0006814 | 73 | 0.010 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.010 | |
| developmental growth involved in morphogenesis | GO:0060560 | 138 | 0.010 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.010 | |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 40 | 0.010 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 151 | 0.010 | |
| regulation of chromosome organization | GO:0033044 | 83 | 0.010 | |
