| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.540 | |
| rna processing | GO:0006396 | 105 | 0.410 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.388 | |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.384 | |
| rna splicing | GO:0008380 | 54 | 0.357 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.188 | |
| mrna processing | GO:0006397 | 63 | 0.179 | |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.161 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.137 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.102 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 8 | 0.092 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.086 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.083 | |
| transmembrane transport | GO:0055085 | 412 | 0.078 | |
| rna interference | GO:0016246 | 2 | 0.075 | |
| mrna metabolic process | GO:0016071 | 84 | 0.072 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 12 | 0.070 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.064 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.061 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.060 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.060 | |
| spliceosomal complex assembly | GO:0000245 | 6 | 0.060 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.059 | |
| cation transport | GO:0006812 | 399 | 0.055 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.053 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.053 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.053 | |
| amine metabolic process | GO:0009308 | 45 | 0.052 | |
| regulation of rna splicing | GO:0043484 | 37 | 0.050 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.046 | |
| gene silencing | GO:0016458 | 38 | 0.044 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.044 | |
| mitochondrion organization | GO:0007005 | 134 | 0.044 | |
| regulation of cell division | GO:0051302 | 76 | 0.043 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.041 | |
| ribonucleoprotein complex disassembly | GO:0032988 | 3 | 0.040 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.039 | |
| organelle fission | GO:0048285 | 170 | 0.038 | |
| regulation of androgen receptor signaling pathway | GO:0060765 | 3 | 0.037 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.036 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.036 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.036 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.035 | |
| gonad development | GO:0008406 | 141 | 0.034 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.034 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.034 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.034 | |
| protein complex disassembly | GO:0043241 | 40 | 0.033 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.032 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.032 | |
| negative regulation of mrna processing | GO:0050686 | 12 | 0.032 | |
| posttranscriptional gene silencing | GO:0016441 | 10 | 0.032 | |
| protein refolding | GO:0042026 | 1 | 0.031 | |
| spermatogenesis | GO:0007283 | 284 | 0.031 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.031 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.030 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.030 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.030 | |
| positive regulation of intracellular estrogen receptor signaling pathway | GO:0033148 | 4 | 0.029 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.029 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.029 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.029 | |
| intrinsic apoptotic signaling pathway by p53 class mediator | GO:0072332 | 35 | 0.029 | |
| regulation of muscle tissue development | GO:1901861 | 97 | 0.027 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.027 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.026 | |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.026 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.026 | |
| regulation of ion transport | GO:0043269 | 215 | 0.026 | |
| blood circulation | GO:0008015 | 195 | 0.026 | |
| membrane organization | GO:0061024 | 245 | 0.026 | |
| positive regulation of cellular catabolic process | GO:0031331 | 148 | 0.026 | |
| negative regulation of phosphorylation | GO:0042326 | 166 | 0.026 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.026 | |
| muscle tissue development | GO:0060537 | 308 | 0.025 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.025 | |
| oxidation reduction process | GO:0055114 | 342 | 0.025 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.025 | |
| cellular homeostasis | GO:0019725 | 240 | 0.025 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.024 | |
| male gamete generation | GO:0048232 | 285 | 0.024 | |
| mitochondrial transport | GO:0006839 | 36 | 0.024 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.024 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.024 | |
| wnt signaling pathway | GO:0016055 | 188 | 0.024 | |
| androgen receptor signaling pathway | GO:0030521 | 8 | 0.024 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.024 | |
| nuclear division | GO:0000280 | 158 | 0.023 | |
| multicellular organism growth | GO:0035264 | 161 | 0.023 | |
| myosin filament organization | GO:0031033 | 3 | 0.023 | |
| muscle contraction | GO:0006936 | 101 | 0.023 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.023 | |
| angiogenesis | GO:0001525 | 201 | 0.023 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.023 | |
| regulation of transmembrane transport | GO:0034762 | 128 | 0.022 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.022 | |
| gene silencing by rna | GO:0031047 | 19 | 0.022 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 159 | 0.022 | |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.022 | |
| intracellular steroid hormone receptor signaling pathway | GO:0030518 | 29 | 0.022 | |
| receptor biosynthetic process | GO:0032800 | 3 | 0.022 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.022 | |
| regulation of cell activation | GO:0050865 | 289 | 0.022 | |
| camera type eye development | GO:0043010 | 266 | 0.021 | |
| blood vessel morphogenesis | GO:0048514 | 285 | 0.021 | |
| circulatory system process | GO:0003013 | 197 | 0.021 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.021 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.021 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.021 | |
| regulation of transferase activity | GO:0051338 | 263 | 0.021 | |
| carboxylic acid biosynthetic process | GO:0046394 | 86 | 0.021 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.021 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.020 | |
| oogenesis | GO:0048477 | 56 | 0.020 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.020 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.020 | |
| extrinsic apoptotic signaling pathway | GO:0097191 | 126 | 0.019 | |
| ossification | GO:0001503 | 216 | 0.019 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.019 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.019 | |
| nuclear transport | GO:0051169 | 139 | 0.019 | |
| protein targeting | GO:0006605 | 143 | 0.019 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.019 | |
| cellular chemical homeostasis | GO:0055082 | 215 | 0.019 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.019 | |
| regulation of meiotic cell cycle | GO:0051445 | 34 | 0.019 | |
| macromolecular complex disassembly | GO:0032984 | 43 | 0.018 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.018 | |
| carbohydrate homeostasis | GO:0033500 | 128 | 0.018 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.018 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.018 | |
| nucleotide catabolic process | GO:0009166 | 217 | 0.018 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.018 | |
| establishment of rna localization | GO:0051236 | 18 | 0.018 | |
| germ cell development | GO:0007281 | 185 | 0.018 | |
| regulation of binding | GO:0051098 | 111 | 0.018 | |
| sequestering of metal ion | GO:0051238 | 19 | 0.018 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.018 | |
| negative regulation of protein modification process | GO:0031400 | 163 | 0.018 | |
| skeletal muscle cell differentiation | GO:0035914 | 66 | 0.018 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.017 | |
| sensory perception | GO:0007600 | 245 | 0.017 | |
| regulation of metal ion transport | GO:0010959 | 106 | 0.017 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.017 | |
| glucose homeostasis | GO:0042593 | 128 | 0.017 | |
| immune effector process | GO:0002252 | 321 | 0.017 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.017 | |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.017 | |
| stem cell differentiation | GO:0048863 | 268 | 0.017 | |
| cell division | GO:0051301 | 120 | 0.017 | |
| fertilization | GO:0009566 | 127 | 0.016 | |
| positive regulation of transcription from rna polymerase i promoter | GO:0045943 | 3 | 0.016 | |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.016 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.016 | |
| regulation of ion transmembrane transport | GO:0034765 | 119 | 0.016 | |
| transmission of nerve impulse | GO:0019226 | 76 | 0.016 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.016 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.016 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.016 | |
| b cell activation | GO:0042113 | 161 | 0.016 | |
| calcium ion transport | GO:0006816 | 159 | 0.016 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 157 | 0.016 | |
| purine nucleotide catabolic process | GO:0006195 | 211 | 0.016 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.015 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.015 | |
| multicellular organismal signaling | GO:0035637 | 91 | 0.015 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 220 | 0.015 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.015 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.015 | |
| positive regulation of apoptotic signaling pathway | GO:2001235 | 95 | 0.015 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.015 | |
| endocytosis | GO:0006897 | 168 | 0.015 | |
| cell adhesion | GO:0007155 | 329 | 0.015 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.015 | |
| regulation of protein kinase activity | GO:0045859 | 232 | 0.015 | |
| signal transduction by p53 class mediator | GO:0072331 | 51 | 0.015 | |
| lipid transport | GO:0006869 | 98 | 0.015 | |
| regulation of cell cycle checkpoint | GO:1901976 | 9 | 0.015 | |
| regulation of response to wounding | GO:1903034 | 189 | 0.015 | |
| negative regulation of mrna splicing via spliceosome | GO:0048025 | 12 | 0.014 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.014 | |
| sperm motility | GO:0030317 | 47 | 0.014 | |
| action potential | GO:0001508 | 78 | 0.014 | |
| regulation of exit from mitosis | GO:0007096 | 1 | 0.014 | |
| inflammatory response | GO:0006954 | 244 | 0.014 | |
| embryonic limb morphogenesis | GO:0030326 | 126 | 0.014 | |
| regulation of cell adhesion | GO:0030155 | 154 | 0.014 | |
| myosin filament assembly | GO:0031034 | 2 | 0.014 | |
| glycosyl compound catabolic process | GO:1901658 | 206 | 0.014 | |
| tissue homeostasis | GO:0001894 | 115 | 0.014 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.014 | |
| protein catabolic process | GO:0030163 | 221 | 0.014 | |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.014 | |
| protein targeting to mitochondrion | GO:0006626 | 6 | 0.014 | |
| intracellular receptor signaling pathway | GO:0030522 | 74 | 0.014 | |
| regulation of protein localization | GO:0032880 | 231 | 0.013 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.013 | |
| respiratory system development | GO:0060541 | 190 | 0.013 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 167 | 0.013 | |
| regulation of adaptive immune response | GO:0002819 | 90 | 0.013 | |
| rho protein signal transduction | GO:0007266 | 32 | 0.013 | |
| sequestering of calcium ion | GO:0051208 | 18 | 0.013 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.013 | |
| morphogenesis of a branching epithelium | GO:0061138 | 193 | 0.013 | |
| negative regulation of transferase activity | GO:0051348 | 85 | 0.013 | |
| female gamete generation | GO:0007292 | 74 | 0.013 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.013 | |
| heart process | GO:0003015 | 94 | 0.013 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.013 | |
| skeletal system development | GO:0001501 | 356 | 0.013 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.013 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.013 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.013 | |
| cognition | GO:0050890 | 149 | 0.013 | |
| nucleic acid transport | GO:0050657 | 18 | 0.013 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.013 | |
| response to oxidative stress | GO:0006979 | 123 | 0.013 | |
| regulation of cell motility | GO:2000145 | 236 | 0.013 | |
| regulation of ras protein signal transduction | GO:0046578 | 114 | 0.013 | |
| regulation of ossification | GO:0030278 | 112 | 0.012 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.012 | |
| negative regulation of adaptive immune response | GO:0002820 | 25 | 0.012 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.012 | |
| epithelial tube morphogenesis | GO:0060562 | 303 | 0.012 | |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 1 | 0.012 | |
| adaptive immune response | GO:0002250 | 155 | 0.012 | |
| ribosome biogenesis | GO:0042254 | 20 | 0.012 | |
| mapk cascade | GO:0000165 | 281 | 0.012 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.012 | |
| negative regulation of binding | GO:0051100 | 39 | 0.012 | |
| actomyosin structure organization | GO:0031032 | 56 | 0.012 | |
| positive regulation of growth | GO:0045927 | 104 | 0.012 | |
| stem cell development | GO:0048864 | 219 | 0.012 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.012 | |
| regulation of proteolysis | GO:0030162 | 164 | 0.012 | |
| trna wobble base modification | GO:0002097 | 2 | 0.012 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 83 | 0.012 | |
| intracellular protein transport | GO:0006886 | 204 | 0.012 | |
| circadian regulation of gene expression | GO:0032922 | 48 | 0.012 | |
| calcium ion transmembrane transport | GO:0070588 | 85 | 0.012 | |
| negative regulation of rna splicing | GO:0033119 | 12 | 0.012 | |
| positive regulation of cysteine type endopeptidase activity | GO:2001056 | 39 | 0.012 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.012 | |
| single fertilization | GO:0007338 | 82 | 0.012 | |
| muscle system process | GO:0003012 | 141 | 0.012 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.012 | |
| cellular divalent inorganic cation homeostasis | GO:0072503 | 127 | 0.011 | |
| mrna splice site selection | GO:0006376 | 5 | 0.011 | |
| regionalization | GO:0003002 | 337 | 0.011 | |
| heart contraction | GO:0060047 | 93 | 0.011 | |
| cell activation involved in immune response | GO:0002263 | 126 | 0.011 | |
| spermatid differentiation | GO:0048515 | 115 | 0.011 | |
| striated muscle cell development | GO:0055002 | 125 | 0.011 | |
| dna metabolic process | GO:0006259 | 303 | 0.011 | |
| neuronal action potential | GO:0019228 | 54 | 0.011 | |
| ear development | GO:0043583 | 200 | 0.011 | |
| striated muscle contraction | GO:0006941 | 45 | 0.011 | |
| cellular response to oxidative stress | GO:0034599 | 76 | 0.011 | |
| protein localization to organelle | GO:0033365 | 185 | 0.011 | |
| response to extracellular stimulus | GO:0009991 | 127 | 0.011 | |
| pharynx development | GO:0060465 | 1 | 0.011 | |
| epidermis development | GO:0008544 | 187 | 0.011 | |
| negative regulation of kinase activity | GO:0033673 | 81 | 0.011 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.011 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.011 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.011 | |
| regulation of lymphocyte mediated immunity | GO:0002706 | 84 | 0.011 | |
| regulation of wnt signaling pathway | GO:0030111 | 123 | 0.011 | |
| rna catabolic process | GO:0006401 | 29 | 0.010 | |
| striated muscle myosin thick filament assembly | GO:0071688 | 1 | 0.010 | |
| circadian rhythm | GO:0007623 | 114 | 0.010 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.010 | |
| regulation of transcription by chromatin organization | GO:0034401 | 0 | 0.010 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.010 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.010 | |
| monocarboxylic acid biosynthetic process | GO:0072330 | 61 | 0.010 | |
| somatic diversification of immunoglobulins involved in immune response | GO:0002208 | 36 | 0.010 | |
| lung development | GO:0030324 | 164 | 0.010 | |
| regulation of plasma lipoprotein particle levels | GO:0097006 | 23 | 0.010 | |
| cellular potassium ion transport | GO:0071804 | 43 | 0.010 | |
| translation | GO:0006412 | 93 | 0.010 | |
| adult locomotory behavior | GO:0008344 | 91 | 0.010 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.010 | |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.010 | |
| skin development | GO:0043588 | 220 | 0.010 | |
| gland development | GO:0048732 | 330 | 0.010 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 169 | 0.010 | |
| cellular ion homeostasis | GO:0006873 | 165 | 0.010 | |
| cytokine production | GO:0001816 | 319 | 0.010 | |
| regulation of dna damage checkpoint | GO:2000001 | 3 | 0.010 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.010 | |
| adult behavior | GO:0030534 | 135 | 0.010 | |
