| mrna processing | GO:0006397 | 63 | 0.417 | Fly |
| rna splicing | GO:0008380 | 54 | 0.313 | Fly |
| rna processing | GO:0006396 | 105 | 0.292 | Fly |
| nuclear division | GO:0000280 | 158 | 0.244 | Fly |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.230 | Fly |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.200 | Fly |
| regulation of rna splicing | GO:0043484 | 37 | 0.165 | Fly |
| alternative mrna splicing via spliceosome | GO:0000380 | 12 | 0.159 | Fly |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.109 | |
| male meiosis | GO:0007140 | 37 | 0.104 | |
| organelle fission | GO:0048285 | 170 | 0.101 | Fly |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 43 | 0.089 | Fly |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.088 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.086 | Fly |
| regulation of organelle organization | GO:0033043 | 289 | 0.086 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.082 | |
| regionalization | GO:0003002 | 337 | 0.079 | |
| mrna metabolic process | GO:0016071 | 84 | 0.073 | Fly |
| pole plasm assembly | GO:0007315 | 2 | 0.070 | |
| mitochondrion distribution | GO:0048311 | 4 | 0.068 | |
| translation | GO:0006412 | 93 | 0.066 | |
| establishment or maintenance of cell polarity | GO:0007163 | 86 | 0.064 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.060 | |
| microtubule based process | GO:0007017 | 236 | 0.058 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.055 | |
| centromere complex assembly | GO:0034508 | 3 | 0.054 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 2 | 0.054 | |
| synapse organization | GO:0050808 | 125 | 0.054 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 8 | 0.053 | Fly |
| adult locomotory behavior | GO:0008344 | 91 | 0.044 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.042 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.042 | |
| stem cell development | GO:0048864 | 219 | 0.041 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.041 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.041 | |
| ossification | GO:0001503 | 216 | 0.040 | |
| transmission of nerve impulse | GO:0019226 | 76 | 0.040 | |
| germ cell development | GO:0007281 | 185 | 0.039 | |
| transmembrane transport | GO:0055085 | 412 | 0.038 | |
| glucose metabolic process | GO:0006006 | 92 | 0.038 | |
| neuronal action potential | GO:0019228 | 54 | 0.037 | |
| regulation of transcription from rna polymerase iii promoter | GO:0006359 | 2 | 0.036 | |
| cell adhesion | GO:0007155 | 329 | 0.035 | |
| spermatid differentiation | GO:0048515 | 115 | 0.034 | |
| asymmetric stem cell division | GO:0098722 | 3 | 0.032 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.032 | |
| synapse assembly | GO:0007416 | 56 | 0.032 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.031 | |
| methylation | GO:0032259 | 134 | 0.030 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.030 | |
| dna metabolic process | GO:0006259 | 303 | 0.030 | |
| negative regulation of protein targeting to membrane | GO:0090315 | 1 | 0.030 | |
| regulation of gluconeogenesis | GO:0006111 | 30 | 0.029 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.029 | |
| monosaccharide metabolic process | GO:0005996 | 106 | 0.029 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.029 | |
| peptidyl tyrosine modification | GO:0018212 | 145 | 0.029 | |
| response to acid chemical | GO:0001101 | 111 | 0.029 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.028 | Fly |
| regulation of membrane potential | GO:0042391 | 192 | 0.028 | |
| regulation of synapse assembly | GO:0051963 | 29 | 0.027 | |
| spermatid development | GO:0007286 | 108 | 0.027 | |
| action potential | GO:0001508 | 78 | 0.026 | |
| chromatin organization | GO:0006325 | 206 | 0.026 | |
| multicellular organism growth | GO:0035264 | 161 | 0.026 | |
| stem cell differentiation | GO:0048863 | 268 | 0.026 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.026 | |
| regulation of carbohydrate metabolic process | GO:0006109 | 75 | 0.026 | |
| asymmetric neuroblast division | GO:0055059 | 1 | 0.025 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.025 | |
| regulation of glucose metabolic process | GO:0010906 | 60 | 0.025 | |
| histone methylation | GO:0016571 | 71 | 0.025 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.025 | |
| multicellular organismal signaling | GO:0035637 | 91 | 0.025 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.024 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.024 | |
| inflammatory response | GO:0006954 | 244 | 0.024 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.024 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.024 | |
| lung development | GO:0030324 | 164 | 0.024 | |
| peptidyl tyrosine phosphorylation | GO:0018108 | 143 | 0.024 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.023 | |
| cation transmembrane transport | GO:0098655 | 266 | 0.023 | |
| inter male aggressive behavior | GO:0002121 | 3 | 0.023 | |
| muscle cell differentiation | GO:0042692 | 261 | 0.023 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.022 | |
| myeloid leukocyte differentiation | GO:0002573 | 119 | 0.022 | |
| protein ubiquitination | GO:0016567 | 171 | 0.022 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 199 | 0.022 | |
| cellular carbohydrate metabolic process | GO:0044262 | 119 | 0.021 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.021 | |
| meiotic cell cycle process | GO:1903046 | 77 | 0.021 | |
| inorganic ion transmembrane transport | GO:0098660 | 234 | 0.021 | |
| positive regulation of intracellular estrogen receptor signaling pathway | GO:0033148 | 4 | 0.021 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.020 | |
| negative regulation of cell activation | GO:0050866 | 111 | 0.020 | |
| translational initiation | GO:0006413 | 24 | 0.020 | |
| positive regulation of synaptic growth at neuromuscular junction | GO:0045887 | 1 | 0.020 | |
| carbohydrate catabolic process | GO:0016052 | 32 | 0.020 | |
| skeletal system development | GO:0001501 | 356 | 0.019 | |
| regulation of cell activation | GO:0050865 | 289 | 0.019 | |
| reactive oxygen species biosynthetic process | GO:1903409 | 8 | 0.019 | |
| synaptic transmission | GO:0007268 | 329 | 0.019 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.019 | |
| positive regulation of reactive oxygen species metabolic process | GO:2000379 | 11 | 0.019 | |
| protein dna complex subunit organization | GO:0071824 | 28 | 0.019 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.019 | Fly |
| l amino acid transport | GO:0015807 | 32 | 0.018 | |
| response to nutrient levels | GO:0031667 | 109 | 0.018 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.018 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.018 | |
| dna repair | GO:0006281 | 107 | 0.018 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.018 | |
| gluconeogenesis | GO:0006094 | 39 | 0.018 | |
| establishment or maintenance of microtubule cytoskeleton polarity | GO:0030951 | 1 | 0.018 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 183 | 0.018 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.018 | Fly |
| intracellular mrna localization | GO:0008298 | 4 | 0.018 | |
| regulation of anatomical structure size | GO:0090066 | 178 | 0.018 | |
| mitochondrion organization | GO:0007005 | 134 | 0.018 | |
| ribonucleoside catabolic process | GO:0042454 | 206 | 0.018 | |
| inorganic cation transmembrane transport | GO:0098662 | 207 | 0.017 | |
| regulation of chromosome organization | GO:0033044 | 83 | 0.017 | |
| cell maturation | GO:0048469 | 127 | 0.017 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 77 | 0.017 | |
| regulation of translation | GO:0006417 | 71 | 0.017 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.017 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.017 | |
| cellularization | GO:0007349 | 1 | 0.017 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.017 | |
| amine metabolic process | GO:0009308 | 45 | 0.017 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.017 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.017 | |
| nucleus organization | GO:0006997 | 45 | 0.017 | |
| muscle tissue development | GO:0060537 | 308 | 0.016 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.016 | |
| negative regulation of immune system process | GO:0002683 | 209 | 0.016 | |
| ribonucleotide catabolic process | GO:0009261 | 208 | 0.016 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.016 | |
| endocytosis | GO:0006897 | 168 | 0.016 | |
| regulation of metal ion transport | GO:0010959 | 106 | 0.016 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.016 | |
| cation transport | GO:0006812 | 399 | 0.016 | |
| cellular response to monosaccharide stimulus | GO:0071326 | 47 | 0.016 | |
| circadian rhythm | GO:0007623 | 114 | 0.015 | |
| regulation of cellular carbohydrate metabolic process | GO:0010675 | 75 | 0.015 | |
| locomotory behavior | GO:0007626 | 195 | 0.015 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.015 | |
| myelination | GO:0042552 | 74 | 0.015 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 159 | 0.015 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.015 | |
| oxidation reduction process | GO:0055114 | 342 | 0.015 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.015 | |
| hexose biosynthetic process | GO:0019319 | 39 | 0.015 | |
| circulatory system process | GO:0003013 | 197 | 0.015 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.015 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.015 | |
| positive regulation of translation | GO:0045727 | 19 | 0.015 | |
| cellular homeostasis | GO:0019725 | 240 | 0.015 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.015 | |
| tissue homeostasis | GO:0001894 | 115 | 0.014 | |
| muscle system process | GO:0003012 | 141 | 0.014 | |
| nucleotide transmembrane transport | GO:1901679 | 2 | 0.014 | |
| cell division | GO:0051301 | 120 | 0.014 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.014 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.014 | |
| regulation of reactive oxygen species biosynthetic process | GO:1903426 | 2 | 0.014 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.014 | Fly |
| regulation of protein localization | GO:0032880 | 231 | 0.014 | |
| positive regulation of growth | GO:0045927 | 104 | 0.014 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.014 | |
| response to retinoic acid | GO:0032526 | 56 | 0.014 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.014 | |
| membrane organization | GO:0061024 | 245 | 0.013 | |
| protein processing | GO:0016485 | 163 | 0.013 | |
| regulation of system process | GO:0044057 | 200 | 0.013 | |
| peptidyl serine phosphorylation | GO:0018105 | 74 | 0.013 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 81 | 0.013 | |
| peptidyl lysine modification | GO:0018205 | 77 | 0.013 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.013 | |
| digestive tract morphogenesis | GO:0048546 | 147 | 0.013 | |
| transcription from rna polymerase iii promoter | GO:0006383 | 3 | 0.013 | |
| monosaccharide biosynthetic process | GO:0046364 | 44 | 0.013 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 2 | 0.013 | |
| hexose metabolic process | GO:0019318 | 98 | 0.013 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.013 | Rat |
| nucleotide catabolic process | GO:0009166 | 217 | 0.013 | |
| negative regulation of cellular amino acid metabolic process | GO:0045763 | 0 | 0.013 | |
| regulation of mrna stability | GO:0043488 | 23 | 0.013 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.013 | |
| actin cytoskeleton organization | GO:0030036 | 220 | 0.013 | |
| male meiosis i | GO:0007141 | 16 | 0.013 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.013 | |
| extrinsic apoptotic signaling pathway | GO:0097191 | 126 | 0.013 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.012 | |
| intracellular protein transport | GO:0006886 | 204 | 0.012 | |
| sodium ion transport | GO:0006814 | 73 | 0.012 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.012 | |
| sodium ion transmembrane transport | GO:0035725 | 49 | 0.012 | |
| synaptic vesicle localization | GO:0097479 | 59 | 0.012 | |
| axon ensheathment | GO:0008366 | 76 | 0.012 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.012 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.012 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.012 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.012 | Fly |
| positive regulation of chromatin modification | GO:1903310 | 28 | 0.012 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.012 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.012 | |
| potassium ion transport | GO:0006813 | 52 | 0.012 | |
| lymphocyte proliferation | GO:0046651 | 164 | 0.012 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 85 | 0.012 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.011 | |
| circadian regulation of gene expression | GO:0032922 | 48 | 0.011 | |
| divalent metal ion transport | GO:0070838 | 172 | 0.011 | |
| cell growth | GO:0016049 | 130 | 0.011 | |
| regulation of cell size | GO:0008361 | 72 | 0.011 | |
| regulation of rna stability | GO:0043487 | 26 | 0.011 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.011 | |
| gland development | GO:0048732 | 330 | 0.011 | |
| regulation of homeostatic process | GO:0032844 | 182 | 0.011 | |
| engulfment of apoptotic cell | GO:0043652 | 3 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.011 | |
| respiratory system development | GO:0060541 | 190 | 0.011 | |
| g protein coupled receptor signaling pathway | GO:0007186 | 243 | 0.011 | |
| cellular chemical homeostasis | GO:0055082 | 215 | 0.011 | |
| carbohydrate biosynthetic process | GO:0016051 | 74 | 0.011 | |
| regulation of myeloid cell differentiation | GO:0045637 | 96 | 0.011 | |
| localization within membrane | GO:0051668 | 4 | 0.011 | |
| nucleoside metabolic process | GO:0009116 | 246 | 0.010 | |
| cellular polysaccharide metabolic process | GO:0044264 | 38 | 0.010 | |
| canonical wnt signaling pathway | GO:0060070 | 130 | 0.010 | |
| peripheral nervous system neuron axonogenesis | GO:0048936 | 3 | 0.010 | |
| chromosome segregation | GO:0007059 | 48 | 0.010 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.010 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.010 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.010 | |
| negative regulation of lymphocyte activation | GO:0051250 | 91 | 0.010 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.010 | |
| lipid localization | GO:0010876 | 126 | 0.010 | |
| regulation of carbohydrate biosynthetic process | GO:0043255 | 40 | 0.010 | |
| cellular response to peptide | GO:1901653 | 92 | 0.010 | |
| cell fate commitment | GO:0045165 | 210 | 0.010 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.010 | |
| digestive system development | GO:0055123 | 200 | 0.010 | |
| chromosome movement towards spindle pole | GO:0051305 | 3 | 0.010 | |
| divalent inorganic cation transport | GO:0072511 | 178 | 0.010 | |
| neural tube formation | GO:0001841 | 108 | 0.010 | |
