| chromatin organization | GO:0006325 | 206 | 0.195 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.153 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.140 | Human Yeast |
| chromatin modification | GO:0016568 | 187 | 0.093 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.089 | Human |
| mrna metabolic process | GO:0016071 | 84 | 0.087 | Yeast |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.073 | Yeast |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.068 | |
| histone modification | GO:0016570 | 159 | 0.061 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.060 | |
| stem cell differentiation | GO:0048863 | 268 | 0.054 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.052 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.049 | |
| histone methylation | GO:0016571 | 71 | 0.048 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.047 | |
| digestive tract morphogenesis | GO:0048546 | 147 | 0.046 | |
| methylation | GO:0032259 | 134 | 0.046 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.045 | Human Yeast |
| negative regulation of nervous system development | GO:0051961 | 156 | 0.042 | |
| stem cell development | GO:0048864 | 219 | 0.042 | |
| regulation of myeloid cell differentiation | GO:0045637 | 96 | 0.042 | Human |
| negative regulation of dna replication | GO:0008156 | 4 | 0.039 | |
| membrane organization | GO:0061024 | 245 | 0.039 | |
| regulation of chromatin modification | GO:1903308 | 57 | 0.038 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.038 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.037 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.036 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.036 | |
| mrna splicing via spliceosome | GO:0000398 | 43 | 0.036 | |
| nuclear division | GO:0000280 | 158 | 0.036 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.036 | |
| germ cell development | GO:0007281 | 185 | 0.035 | |
| rna splicing | GO:0008380 | 54 | 0.034 | |
| histone lysine methylation | GO:0034968 | 50 | 0.034 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.034 | |
| negative regulation of cell development | GO:0010721 | 169 | 0.034 | |
| spermatogenesis | GO:0007283 | 284 | 0.034 | |
| macromolecule methylation | GO:0043414 | 120 | 0.034 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.033 | Human |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.033 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.032 | |
| male gamete generation | GO:0048232 | 285 | 0.032 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.032 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.031 | |
| myeloid cell homeostasis | GO:0002262 | 114 | 0.031 | |
| peptidyl lysine modification | GO:0018205 | 77 | 0.031 | |
| regulation of mrna metabolic process | GO:1903311 | 43 | 0.031 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.030 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.030 | Human Yeast |
| protein ubiquitination | GO:0016567 | 171 | 0.030 | Human Yeast |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.029 | |
| negative regulation of immune system process | GO:0002683 | 209 | 0.029 | Human |
| rna processing | GO:0006396 | 105 | 0.029 | Yeast |
| protein alkylation | GO:0008213 | 81 | 0.029 | |
| protein modification by small protein removal | GO:0070646 | 21 | 0.028 | |
| erythrocyte differentiation | GO:0030218 | 88 | 0.028 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.027 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.027 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.027 | |
| negative regulation of neuron differentiation | GO:0045665 | 101 | 0.026 | |
| regulation of chromosome organization | GO:0033044 | 83 | 0.026 | |
| engulfment of apoptotic cell | GO:0043652 | 3 | 0.026 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 147 | 0.026 | |
| endoderm formation | GO:0001706 | 20 | 0.025 | |
| amine metabolic process | GO:0009308 | 45 | 0.025 | |
| regulation of protein complex assembly | GO:0043254 | 83 | 0.024 | Yeast |
| mrna processing | GO:0006397 | 63 | 0.024 | Yeast |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.024 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.024 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.024 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.024 | Yeast |
| gliogenesis | GO:0042063 | 141 | 0.024 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.023 | Yeast |
| neural tube development | GO:0021915 | 160 | 0.023 | |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.023 | |
| digestive tract development | GO:0048565 | 190 | 0.023 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.023 | |
| protein methylation | GO:0006479 | 81 | 0.022 | |
| protein localization to organelle | GO:0033365 | 185 | 0.021 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.021 | |
| intracellular mrna localization | GO:0008298 | 4 | 0.021 | |
| gastrulation | GO:0007369 | 116 | 0.021 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.021 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.021 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.020 | |
| cell activation involved in immune response | GO:0002263 | 126 | 0.020 | |
| formation of primary germ layer | GO:0001704 | 77 | 0.020 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.020 | |
| regulation of neuron death | GO:1901214 | 134 | 0.020 | |
| regulation of neuron projection development | GO:0010975 | 169 | 0.019 | |
| glial cell differentiation | GO:0010001 | 131 | 0.019 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.019 | |
| regulation of defense response | GO:0031347 | 233 | 0.019 | |
| dna repair | GO:0006281 | 107 | 0.019 | Yeast |
| purine nucleotide metabolic process | GO:0006163 | 302 | 0.019 | |
| immune effector process | GO:0002252 | 321 | 0.019 | |
| regulation of chromatin organization | GO:1902275 | 57 | 0.019 | |
| organelle assembly | GO:0070925 | 177 | 0.019 | |
| endomembrane system organization | GO:0010256 | 147 | 0.019 | |
| myelination | GO:0042552 | 74 | 0.018 | |
| neuron death | GO:0070997 | 154 | 0.018 | |
| positive regulation of chromatin modification | GO:1903310 | 28 | 0.018 | |
| oocyte axis specification | GO:0007309 | 2 | 0.018 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.018 | |
| regulation of neuron differentiation | GO:0045664 | 281 | 0.018 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.018 | |
| digestive system development | GO:0055123 | 200 | 0.018 | |
| modification dependent protein catabolic process | GO:0019941 | 133 | 0.018 | |
| establishment or maintenance of cytoskeleton polarity | GO:0030952 | 2 | 0.018 | |
| regulation of vesicle mediated transport | GO:0060627 | 139 | 0.018 | |
| protein import | GO:0017038 | 101 | 0.017 | |
| male sex differentiation | GO:0046661 | 109 | 0.017 | |
| stem cell maintenance | GO:0019827 | 130 | 0.017 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.017 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.017 | |
| muscle tissue development | GO:0060537 | 308 | 0.017 | |
| neuronal action potential | GO:0019228 | 54 | 0.017 | |
| protein catabolic process | GO:0030163 | 221 | 0.017 | |
| intracellular protein transport | GO:0006886 | 204 | 0.017 | |
| transmission of nerve impulse | GO:0019226 | 76 | 0.016 | |
| negative regulation of cell cycle | GO:0045786 | 123 | 0.016 | |
| cellularization | GO:0007349 | 1 | 0.016 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.016 | |
| protein acylation | GO:0043543 | 64 | 0.016 | |
| organelle fission | GO:0048285 | 170 | 0.016 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.016 | |
| organic cyclic compound catabolic process | GO:1901361 | 295 | 0.016 | |
| multicellular organism growth | GO:0035264 | 161 | 0.016 | |
| morphogenesis of embryonic epithelium | GO:0016331 | 159 | 0.015 | |
| regionalization | GO:0003002 | 337 | 0.015 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.015 | |
| cellular response to oxidative stress | GO:0034599 | 76 | 0.015 | |
| skin development | GO:0043588 | 220 | 0.015 | |
| camera type eye development | GO:0043010 | 266 | 0.015 | |
| establishment or maintenance of microtubule cytoskeleton polarity | GO:0030951 | 1 | 0.015 | |
| forebrain development | GO:0030900 | 302 | 0.015 | |
| negative regulation of cellular amine metabolic process | GO:0033239 | 1 | 0.015 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 139 | 0.015 | |
| ensheathment of neurons | GO:0007272 | 76 | 0.015 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 94 | 0.015 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.015 | |
| dna metabolic process | GO:0006259 | 303 | 0.015 | Yeast |
| regulation of epithelial cell proliferation | GO:0050678 | 141 | 0.015 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.015 | Yeast |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.014 | |
| leukocyte proliferation | GO:0070661 | 172 | 0.014 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.014 | |
| histone h3 k4 methylation | GO:0051568 | 23 | 0.014 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.014 | |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.014 | |
| multicellular organismal signaling | GO:0035637 | 91 | 0.014 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.014 | |
| gene silencing | GO:0016458 | 38 | 0.014 | Yeast |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.014 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 199 | 0.014 | |
| spermatid differentiation | GO:0048515 | 115 | 0.014 | |
| gtp catabolic process | GO:0006184 | 143 | 0.014 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 2 | 0.014 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.013 | |
| regulation of intrinsic apoptotic signaling pathway | GO:2001242 | 61 | 0.013 | |
| cell division | GO:0051301 | 120 | 0.013 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.013 | |
| purine ribonucleotide metabolic process | GO:0009150 | 290 | 0.013 | |
| cellular protein complex assembly | GO:0043623 | 116 | 0.013 | |
| regulation of mrna processing | GO:0050684 | 41 | 0.013 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.013 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.013 | |
| sensory organ morphogenesis | GO:0090596 | 242 | 0.013 | |
| dephosphorylation | GO:0016311 | 129 | 0.013 | |
| rna splicing via transesterification reactions | GO:0000375 | 43 | 0.013 | |
| response to radiation | GO:0009314 | 165 | 0.013 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 4 | 0.013 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.013 | |
| positive regulation of organelle organization | GO:0010638 | 128 | 0.013 | |
| myeloid leukocyte differentiation | GO:0002573 | 119 | 0.013 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 132 | 0.013 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.013 | |
| action potential | GO:0001508 | 78 | 0.013 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.013 | |
| negative regulation of multi organism process | GO:0043901 | 68 | 0.013 | |
| positive regulation of apoptotic signaling pathway | GO:2001235 | 95 | 0.013 | |
| leukocyte activation involved in immune response | GO:0002366 | 126 | 0.013 | |
| viral process | GO:0016032 | 41 | 0.013 | |
| fertilization | GO:0009566 | 127 | 0.013 | |
| male anatomical structure morphogenesis | GO:0090598 | 4 | 0.012 | |
| positive regulation of nervous system development | GO:0051962 | 221 | 0.012 | |
| protein targeting to vacuole | GO:0006623 | 3 | 0.012 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.012 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.012 | |
| rhythmic process | GO:0048511 | 174 | 0.012 | |
| nucleoside phosphate catabolic process | GO:1901292 | 222 | 0.012 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 133 | 0.012 | |
| neuron apoptotic process | GO:0051402 | 142 | 0.012 | |
| pole plasm assembly | GO:0007315 | 2 | 0.012 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 3 | 0.012 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.012 | |
| dna replication | GO:0006260 | 52 | 0.012 | |
| skeletal system development | GO:0001501 | 356 | 0.012 | |
| response to acid chemical | GO:0001101 | 111 | 0.012 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 194 | 0.012 | |
| gland development | GO:0048732 | 330 | 0.012 | |
| regulation of ral gtpase activity | GO:0032315 | 4 | 0.012 | |
| regulation of cell activation | GO:0050865 | 289 | 0.012 | |
| positive regulation of lymphocyte activation | GO:0051251 | 140 | 0.012 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 32 | 0.012 | |
| negative regulation of molecular function | GO:0044092 | 258 | 0.011 | |
| ribonucleoprotein complex disassembly | GO:0032988 | 3 | 0.011 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.011 | |
| regulation of gliogenesis | GO:0014013 | 50 | 0.011 | |
| regulation of histone modification | GO:0031056 | 56 | 0.011 | |
| male gonad development | GO:0008584 | 88 | 0.011 | |
| regulation of cellular protein catabolic process | GO:1903362 | 61 | 0.011 | |
| histone deacetylation | GO:0016575 | 26 | 0.011 | |
| lens development in camera type eye | GO:0002088 | 62 | 0.011 | |
| oocyte construction | GO:0007308 | 2 | 0.011 | |
| male genitalia morphogenesis | GO:0048808 | 4 | 0.011 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 9 | 0.011 | Human Yeast |
| maintenance of location | GO:0051235 | 89 | 0.011 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.011 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.011 | |
| positive regulation of synaptic growth at neuromuscular junction | GO:0045887 | 1 | 0.011 | |
| glycerolipid metabolic process | GO:0046486 | 122 | 0.011 | |
| blood vessel morphogenesis | GO:0048514 | 285 | 0.011 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.011 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 203 | 0.011 | |
| dna endoreduplication | GO:0042023 | 4 | 0.011 | |
| negative regulation of neuron apoptotic process | GO:0043524 | 92 | 0.011 | |
| response to oxidative stress | GO:0006979 | 123 | 0.011 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.011 | |
| axon target recognition | GO:0007412 | 4 | 0.011 | |
| internal peptidyl lysine acetylation | GO:0018393 | 42 | 0.011 | |
| positive regulation of chromosome organization | GO:2001252 | 33 | 0.011 | |
| histone deubiquitination | GO:0016578 | 2 | 0.011 | |
| protein polymerization | GO:0051258 | 57 | 0.011 | |
| gonad development | GO:0008406 | 141 | 0.011 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.010 | |
| lateral inhibition | GO:0046331 | 1 | 0.010 | |
| negative regulation of dna dependent dna replication | GO:2000104 | 1 | 0.010 | |
| regulation of cell motility | GO:2000145 | 236 | 0.010 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.010 | |
| double strand break repair | GO:0006302 | 48 | 0.010 | |
| positive regulation of proteolysis | GO:0045862 | 85 | 0.010 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.010 | |
| peptidyl tyrosine phosphorylation | GO:0018108 | 143 | 0.010 | |
| protein targeting | GO:0006605 | 143 | 0.010 | |
| leukocyte mediated immunity | GO:0002443 | 174 | 0.010 | |
| molting cycle | GO:0042303 | 90 | 0.010 | |
| regulation of neuron apoptotic process | GO:0043523 | 122 | 0.010 | |
| multicellular organismal homeostasis | GO:0048871 | 164 | 0.010 | |
| proteasomal protein catabolic process | GO:0010498 | 98 | 0.010 | |
| lipid modification | GO:0030258 | 65 | 0.010 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.010 | |