| protein targeting to peroxisome | GO:0006625 | 4 | 0.659 | |
| establishment of protein localization to peroxisome | GO:0072663 | 4 | 0.613 | |
| peroxisomal transport | GO:0043574 | 4 | 0.521 | |
| protein import into peroxisome matrix | GO:0016558 | 3 | 0.446 | |
| fatty acid oxidation | GO:0019395 | 28 | 0.443 | |
| lipid catabolic process | GO:0016042 | 69 | 0.358 | |
| monocarboxylic acid metabolic process | GO:0032787 | 191 | 0.344 | |
| monocarboxylic acid catabolic process | GO:0072329 | 27 | 0.343 | |
| protein localization to peroxisome | GO:0072662 | 4 | 0.338 | |
| cellular lipid catabolic process | GO:0044242 | 52 | 0.303 | |
| oxidation reduction process | GO:0055114 | 342 | 0.280 | |
| carboxylic acid catabolic process | GO:0046395 | 51 | 0.263 | |
| cellular lipid metabolic process | GO:0044255 | 323 | 0.260 | |
| small molecule catabolic process | GO:0044282 | 71 | 0.220 | |
| fatty acid metabolic process | GO:0006631 | 121 | 0.205 | |
| transmembrane transport | GO:0055085 | 412 | 0.196 | |
| lipid modification | GO:0030258 | 65 | 0.163 | |
| lipid oxidation | GO:0034440 | 29 | 0.160 | |
| organic acid catabolic process | GO:0016054 | 51 | 0.153 | |
| fatty acid catabolic process | GO:0009062 | 25 | 0.129 | |
| peroxisome organization | GO:0007031 | 7 | 0.124 | |
| protein localization to organelle | GO:0033365 | 185 | 0.100 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.097 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.093 | |
| lipid biosynthetic process | GO:0008610 | 179 | 0.089 | |
| small molecule biosynthetic process | GO:0044283 | 132 | 0.085 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.080 | |
| fatty acid beta oxidation | GO:0006635 | 16 | 0.076 | |
| cytoplasmic transport | GO:0016482 | 234 | 0.072 | |
| amine metabolic process | GO:0009308 | 45 | 0.069 | |
| membrane organization | GO:0061024 | 245 | 0.064 | |
| very long chain fatty acid metabolic process | GO:0000038 | 8 | 0.064 | |
| lipid transport | GO:0006869 | 98 | 0.055 | |
| organic anion transport | GO:0015711 | 137 | 0.054 | |
| protein import | GO:0017038 | 101 | 0.048 | |
| dna metabolic process | GO:0006259 | 303 | 0.048 | |
| alcohol metabolic process | GO:0006066 | 116 | 0.048 | |
| fatty acid alpha oxidation | GO:0001561 | 2 | 0.045 | |
| anion transport | GO:0006820 | 177 | 0.044 | |
| protein targeting | GO:0006605 | 143 | 0.044 | |
| steroid metabolic process | GO:0008202 | 119 | 0.042 | |
| spermatogenesis | GO:0007283 | 284 | 0.041 | |
| male gamete generation | GO:0048232 | 285 | 0.041 | |
| glycerolipid metabolic process | GO:0046486 | 122 | 0.037 | |
| glycosyl compound metabolic process | GO:1901657 | 246 | 0.037 | Human |
| protein localization to plasma membrane | GO:0072659 | 57 | 0.037 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.036 | |
| myeloid cell differentiation | GO:0030099 | 233 | 0.035 | |
| protein localization to membrane | GO:0072657 | 108 | 0.035 | |
| intracellular protein transport | GO:0006886 | 204 | 0.035 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.035 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.035 | |
| cofactor metabolic process | GO:0051186 | 80 | 0.034 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.034 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.033 | |
| negative regulation of immune system process | GO:0002683 | 209 | 0.032 | Mouse |
| carboxylic acid transport | GO:0046942 | 100 | 0.032 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.032 | Human |
| synaptic transmission | GO:0007268 | 329 | 0.031 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.031 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.030 | |
| protein transmembrane transport | GO:0071806 | 8 | 0.030 | |
| negative regulation of cell proliferation | GO:0008285 | 296 | 0.029 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.029 | |
| lipid localization | GO:0010876 | 126 | 0.028 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.028 | Human |
| regulation of synaptic plasticity | GO:0048167 | 87 | 0.028 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 4 | 0.028 | |
| alcohol biosynthetic process | GO:0046165 | 43 | 0.027 | |
| forebrain development | GO:0030900 | 302 | 0.027 | |
| nucleotide metabolic process | GO:0009117 | 332 | 0.027 | Human |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.027 | |
| regulation of mapk cascade | GO:0043408 | 248 | 0.026 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.026 | |
| spermatid differentiation | GO:0048515 | 115 | 0.026 | |
| organic acid transport | GO:0015849 | 101 | 0.026 | |
| regulation of lipid metabolic process | GO:0019216 | 118 | 0.026 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.025 | Human |
| neuron migration | GO:0001764 | 122 | 0.025 | |
| histone modification | GO:0016570 | 159 | 0.024 | |
| maintenance of location | GO:0051235 | 89 | 0.024 | |
| regulation of lymphocyte activation | GO:0051249 | 240 | 0.024 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.024 | |
| organophosphate biosynthetic process | GO:0090407 | 122 | 0.023 | |
| response to oxidative stress | GO:0006979 | 123 | 0.023 | |
| endomembrane system organization | GO:0010256 | 147 | 0.023 | |
| germ cell development | GO:0007281 | 185 | 0.022 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.022 | Human |
| rab protein signal transduction | GO:0032482 | 1 | 0.022 | |
| organic acid biosynthetic process | GO:0016053 | 86 | 0.022 | |
| regulation of response to wounding | GO:1903034 | 189 | 0.022 | |
| leukocyte differentiation | GO:0002521 | 342 | 0.022 | |
| oocyte anterior posterior axis specification | GO:0007314 | 2 | 0.022 | |
| ion transmembrane transport | GO:0034220 | 361 | 0.022 | |
| chromatin organization | GO:0006325 | 206 | 0.022 | |
| nuclear division | GO:0000280 | 158 | 0.021 | |
| carboxylic acid biosynthetic process | GO:0046394 | 86 | 0.021 | |
| microtubule based process | GO:0007017 | 236 | 0.020 | |
| immune effector process | GO:0002252 | 321 | 0.020 | |
| establishment of protein localization to vacuole | GO:0072666 | 4 | 0.020 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.020 | |
| gland development | GO:0048732 | 330 | 0.020 | |
| intracellular cholesterol transport | GO:0032367 | 3 | 0.020 | |
| regulation of secretion | GO:0051046 | 274 | 0.020 | Human |
| dna recombination | GO:0006310 | 92 | 0.020 | |
| response to peptide | GO:1901652 | 136 | 0.020 | |
| purine ribonucleotide catabolic process | GO:0009154 | 208 | 0.019 | Human |
| mapk cascade | GO:0000165 | 281 | 0.019 | |
| skeletal system morphogenesis | GO:0048705 | 203 | 0.019 | |
| very long chain fatty acid catabolic process | GO:0042760 | 2 | 0.018 | |
| cholesterol homeostasis | GO:0042632 | 44 | 0.018 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.018 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 3 | 0.018 | |
| phospholipid metabolic process | GO:0006644 | 87 | 0.018 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.018 | Human |
| bone morphogenesis | GO:0060349 | 78 | 0.018 | |
| reactive oxygen species metabolic process | GO:0072593 | 84 | 0.018 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.018 | Human |
| lymphocyte proliferation | GO:0046651 | 164 | 0.018 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.018 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.018 | Human |
| cellular response to lipopolysaccharide | GO:0071222 | 77 | 0.018 | |
| regulation of hormone levels | GO:0010817 | 211 | 0.018 | |
| c21 steroid hormone biosynthetic process | GO:0006700 | 3 | 0.017 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.017 | Human |
| glycerophospholipid metabolic process | GO:0006650 | 71 | 0.017 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.017 | |
| regulation of membrane potential | GO:0042391 | 192 | 0.017 | |
| leukocyte mediated immunity | GO:0002443 | 174 | 0.017 | |
| sterol metabolic process | GO:0016125 | 58 | 0.016 | |
| positive regulation of kinase activity | GO:0033674 | 155 | 0.016 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.016 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.016 | |
| acylglycerol metabolic process | GO:0006639 | 55 | 0.016 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 2 | 0.016 | |
| protein homooligomerization | GO:0051260 | 43 | 0.016 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.016 | |
| regulation of vesicle mediated transport | GO:0060627 | 139 | 0.016 | Human |
| negative regulation of phosphorus metabolic process | GO:0010563 | 184 | 0.016 | |
| regulation of steroid metabolic process | GO:0019218 | 39 | 0.015 | |
| ossification | GO:0001503 | 216 | 0.015 | |
| covalent chromatin modification | GO:0016569 | 163 | 0.015 | |
| spermatid development | GO:0007286 | 108 | 0.015 | |
| protein localization to vacuole | GO:0072665 | 4 | 0.015 | |
| regionalization | GO:0003002 | 337 | 0.015 | |
| regulation of cell activation | GO:0050865 | 289 | 0.015 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 5 | 0.015 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.015 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.015 | |
| development of primary male sexual characteristics | GO:0046546 | 88 | 0.015 | |
| multicellular organism growth | GO:0035264 | 161 | 0.015 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.015 | |
| positive regulation of protein phosphorylation | GO:0001934 | 242 | 0.015 | |
| learning or memory | GO:0007611 | 148 | 0.015 | |
| amide transport | GO:0042886 | 138 | 0.015 | |
| bone development | GO:0060348 | 120 | 0.015 | |
| cellular response to lipid | GO:0071396 | 145 | 0.014 | |
| response to organonitrogen compound | GO:0010243 | 246 | 0.014 | |
| lipid homeostasis | GO:0055088 | 63 | 0.014 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.014 | |
| cellular homeostasis | GO:0019725 | 240 | 0.014 | |
| hormone metabolic process | GO:0042445 | 86 | 0.014 | |
| chromatin modification | GO:0016568 | 187 | 0.014 | |
| organic hydroxy compound biosynthetic process | GO:1901617 | 77 | 0.014 | |
| histone h2a ubiquitination | GO:0033522 | 3 | 0.014 | |
| plasma membrane organization | GO:0007009 | 90 | 0.014 | |
| inflammatory response | GO:0006954 | 244 | 0.014 | |
| regulated secretory pathway | GO:0045055 | 32 | 0.014 | |
| progesterone biosynthetic process | GO:0006701 | 1 | 0.014 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 220 | 0.014 | Human |
| negative regulation of phosphate metabolic process | GO:0045936 | 184 | 0.014 | |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.014 | |
| response to inorganic substance | GO:0010035 | 96 | 0.013 | |
| locomotory behavior | GO:0007626 | 195 | 0.013 | |
| rhythmic process | GO:0048511 | 174 | 0.013 | |
| circulatory system process | GO:0003013 | 197 | 0.013 | |
| triglyceride metabolic process | GO:0006641 | 51 | 0.013 | |
| regulation of cell migration | GO:0030334 | 219 | 0.013 | |
| regulation of cellular response to stress | GO:0080135 | 159 | 0.013 | |
| organelle assembly | GO:0070925 | 177 | 0.013 | |
| oocyte axis specification | GO:0007309 | 2 | 0.013 | |
| glycosyl compound catabolic process | GO:1901658 | 206 | 0.013 | Human |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.013 | Human |
| macromolecule methylation | GO:0043414 | 120 | 0.013 | |
| blood circulation | GO:0008015 | 195 | 0.013 | |
| regulation of protein stability | GO:0031647 | 52 | 0.013 | |
| organophosphate ester transport | GO:0015748 | 28 | 0.013 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.013 | |
| skeletal system development | GO:0001501 | 356 | 0.013 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.013 | |
| cytokine production | GO:0001816 | 319 | 0.013 | |
| negative regulation of sequence specific dna binding transcription factor activity | GO:0043433 | 40 | 0.012 | |
| axonogenesis | GO:0007409 | 274 | 0.012 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.012 | |
| lymphocyte mediated immunity | GO:0002449 | 139 | 0.012 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 106 | 0.012 | |
| atp metabolic process | GO:0046034 | 75 | 0.012 | |
| response to steroid hormone | GO:0048545 | 56 | 0.012 | |
| regulation of body fluid levels | GO:0050878 | 162 | 0.012 | |
| response to molecule of bacterial origin | GO:0002237 | 143 | 0.012 | |
| response to reactive oxygen species | GO:0000302 | 56 | 0.012 | |
| regulation of cellular component biogenesis | GO:0044087 | 181 | 0.012 | |
| regulation of t cell activation | GO:0050863 | 170 | 0.012 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 2 | 0.012 | |
| cellularization | GO:0007349 | 1 | 0.012 | |
| steroid biosynthetic process | GO:0006694 | 47 | 0.012 | |
| negative regulation of synapse assembly | GO:0051964 | 3 | 0.012 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.012 | |
| compound eye development | GO:0048749 | 1 | 0.012 | |
| regulation of protein kinase activity | GO:0045859 | 232 | 0.012 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.012 | |
| regulation of circadian sleep wake cycle | GO:0042749 | 3 | 0.012 | |
| glutamine family amino acid biosynthetic process | GO:0009084 | 2 | 0.012 | |
| phosphatidylinositol metabolic process | GO:0046488 | 45 | 0.011 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.011 | |
| cofactor biosynthetic process | GO:0051188 | 41 | 0.011 | |
| monocarboxylic acid biosynthetic process | GO:0072330 | 61 | 0.011 | |
| g protein coupled receptor signaling pathway | GO:0007186 | 243 | 0.011 | |
| t cell activation | GO:0042110 | 289 | 0.011 | |
| cytokine mediated signaling pathway | GO:0019221 | 115 | 0.011 | |
| leukocyte proliferation | GO:0070661 | 172 | 0.011 | |
| respiratory tube development | GO:0030323 | 167 | 0.011 | |
| positive regulation of protein serine threonine kinase activity | GO:0071902 | 106 | 0.011 | |
| organelle localization | GO:0051640 | 179 | 0.011 | |
| oogenesis | GO:0048477 | 56 | 0.011 | |
| protein targeting to vacuole | GO:0006623 | 3 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.011 | Human |
| purine containing compound catabolic process | GO:0072523 | 213 | 0.011 | Human |
| response to extracellular stimulus | GO:0009991 | 127 | 0.011 | |
| negative regulation of apoptotic signaling pathway | GO:2001234 | 104 | 0.011 | |
| regulation of intracellular transport | GO:0032386 | 159 | 0.011 | |
| fatty acid transmembrane transport | GO:1902001 | 1 | 0.011 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.011 | |
| male sex differentiation | GO:0046661 | 109 | 0.011 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 230 | 0.011 | Human |
| positive regulation of cell development | GO:0010720 | 237 | 0.011 | |
| establishment of vesicle localization | GO:0051650 | 81 | 0.011 | |
| regulation of secretion by cell | GO:1903530 | 249 | 0.011 | Human |
| response to lipopolysaccharide | GO:0032496 | 128 | 0.011 | |
| cognition | GO:0050890 | 149 | 0.011 | |
| epithelial cell proliferation | GO:0050673 | 174 | 0.011 | |
| synaptonemal complex organization | GO:0070193 | 15 | 0.011 | |
| cell maturation | GO:0048469 | 127 | 0.011 | |
| methylation | GO:0032259 | 134 | 0.011 | |
| hormone secretion | GO:0046879 | 128 | 0.011 | |
| striated muscle tissue development | GO:0014706 | 293 | 0.011 | |
| regulation of cell projection organization | GO:0031344 | 206 | 0.010 | |
| myeloid leukocyte differentiation | GO:0002573 | 119 | 0.010 | |
| sterol transport | GO:0015918 | 38 | 0.010 | |
| asymmetric stem cell division | GO:0098722 | 3 | 0.010 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.010 | |
| regulation of leukocyte differentiation | GO:1902105 | 159 | 0.010 | |
| regulation of lipid biosynthetic process | GO:0046890 | 54 | 0.010 | |
| regulation of lymphocyte differentiation | GO:0045619 | 107 | 0.010 | |
| cellular response to biotic stimulus | GO:0071216 | 92 | 0.010 | |
| glutamate biosynthetic process | GO:0006537 | 2 | 0.010 | |
| positive regulation of secretion | GO:0051047 | 130 | 0.010 | Human |
| developmental maturation | GO:0021700 | 193 | 0.010 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.010 | |
| meiotic cell cycle process | GO:1903046 | 77 | 0.010 | |
| vesicle organization | GO:0016050 | 60 | 0.010 | |
| wnt signaling pathway | GO:0016055 | 188 | 0.010 | |
| tube formation | GO:0035148 | 140 | 0.010 | |
