| dna conformation change | GO:0071103 | 37 | 0.661 | |
| meiosis i | GO:0007127 | 60 | 0.602 | |
| dna repair | GO:0006281 | 107 | 0.497 | |
| synapsis | GO:0007129 | 34 | 0.477 | |
| dna metabolic process | GO:0006259 | 303 | 0.463 | Worm |
| cellular response to dna damage stimulus | GO:0006974 | 207 | 0.453 | Human Worm Fly |
| nuclear transport | GO:0051169 | 139 | 0.321 | |
| meiotic cell cycle | GO:0051321 | 122 | 0.318 | |
| meiotic cell cycle process | GO:1903046 | 77 | 0.271 | |
| chromosome organization involved in meiosis | GO:0070192 | 39 | 0.266 | |
| negative regulation of cell cycle | GO:0045786 | 123 | 0.246 | Fly |
| microtubule based process | GO:0007017 | 236 | 0.242 | |
| recombinational repair | GO:0000725 | 21 | 0.234 | |
| nucleic acid transport | GO:0050657 | 18 | 0.208 | |
| gene silencing | GO:0016458 | 38 | 0.205 | |
| mitotic cell cycle process | GO:1903047 | 159 | 0.204 | Fly |
| cytoplasmic transport | GO:0016482 | 234 | 0.201 | |
| chromatin organization | GO:0006325 | 206 | 0.176 | |
| mrna transport | GO:0051028 | 13 | 0.171 | |
| regulation of hydrolase activity | GO:0051336 | 246 | 0.169 | |
| rna transport | GO:0050658 | 18 | 0.153 | |
| double strand break repair | GO:0006302 | 48 | 0.152 | |
| nucleocytoplasmic transport | GO:0006913 | 139 | 0.143 | |
| intracellular protein transport | GO:0006886 | 204 | 0.137 | |
| protein import into nucleus | GO:0006606 | 95 | 0.133 | |
| regulation of cell cycle | GO:0051726 | 281 | 0.133 | Fly |
| dna packaging | GO:0006323 | 30 | 0.123 | |
| protein localization to nucleus | GO:0034504 | 121 | 0.119 | |
| posttranscriptional gene silencing | GO:0016441 | 10 | 0.118 | |
| organelle fission | GO:0048285 | 170 | 0.115 | |
| protein targeting | GO:0006605 | 143 | 0.110 | |
| cell cycle checkpoint | GO:0000075 | 47 | 0.109 | Fly |
| establishment of rna localization | GO:0051236 | 18 | 0.099 | |
| gonad development | GO:0008406 | 141 | 0.099 | |
| dna recombination | GO:0006310 | 92 | 0.096 | |
| nitrogen compound transport | GO:0071705 | 271 | 0.094 | |
| regulation of cell cycle process | GO:0010564 | 160 | 0.094 | Fly |
| single organism nuclear import | GO:1902593 | 95 | 0.094 | |
| nuclear export | GO:0051168 | 34 | 0.088 | |
| base excision repair | GO:0006284 | 9 | 0.084 | |
| mitotic cell cycle | GO:0000278 | 195 | 0.078 | Fly |
| nucleobase containing compound transport | GO:0015931 | 27 | 0.077 | |
| mitotic chromosome condensation | GO:0007076 | 1 | 0.076 | |
| chromatin modification | GO:0016568 | 187 | 0.074 | |
| macromolecule methylation | GO:0043414 | 120 | 0.069 | |
| mitotic cell cycle checkpoint | GO:0007093 | 31 | 0.066 | Fly |
| nuclear division | GO:0000280 | 158 | 0.066 | |
| macromolecule catabolic process | GO:0009057 | 281 | 0.065 | |
| positive regulation of nfat protein import into nucleus | GO:0051533 | 1 | 0.064 | |
| rna localization | GO:0006403 | 23 | 0.064 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 45 | 0.063 | Fly |
| chromatin assembly | GO:0031497 | 13 | 0.062 | |
| mitotic nuclear division | GO:0007067 | 48 | 0.061 | |
| gene silencing by rna | GO:0031047 | 19 | 0.060 | |
| protein localization to organelle | GO:0033365 | 185 | 0.058 | |
| peptidyl amino acid modification | GO:0018193 | 336 | 0.058 | |
| regulation of organelle organization | GO:0033043 | 289 | 0.054 | |
| methylation | GO:0032259 | 134 | 0.054 | |
| nuclear import | GO:0051170 | 95 | 0.052 | |
| protein import | GO:0017038 | 101 | 0.052 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 280 | 0.050 | |
| protein complex disassembly | GO:0043241 | 40 | 0.049 | |
| forebrain development | GO:0030900 | 302 | 0.049 | |
| mitotic sister chromatid segregation | GO:0000070 | 14 | 0.047 | |
| cellular macromolecule catabolic process | GO:0044265 | 206 | 0.047 | |
| chromatin assembly or disassembly | GO:0006333 | 16 | 0.047 | |
| establishment of protein localization to organelle | GO:0072594 | 118 | 0.046 | |
| double strand break repair via homologous recombination | GO:0000724 | 21 | 0.046 | |
| positive regulation of hydrolase activity | GO:0051345 | 148 | 0.046 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 73 | 0.046 | |
| male gamete generation | GO:0048232 | 285 | 0.045 | |
| positive regulation of nucleocytoplasmic transport | GO:0046824 | 30 | 0.045 | |
| negative regulation of cellular component organization | GO:0051129 | 194 | 0.044 | |
| regulation of protein transport | GO:0051223 | 163 | 0.044 | |
| regulation of cell cycle phase transition | GO:1901987 | 77 | 0.043 | Fly |
| negative regulation of cellular protein metabolic process | GO:0032269 | 247 | 0.043 | |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 40 | 0.042 | |
| female meiotic division | GO:0007143 | 21 | 0.041 | |
| development of primary sexual characteristics | GO:0045137 | 143 | 0.041 | |
| regulation of multi organism process | GO:0043900 | 111 | 0.040 | |
| rna interference | GO:0016246 | 2 | 0.040 | |
| regulation of mitotic cell cycle | GO:0007346 | 126 | 0.040 | Fly |
| small gtpase mediated signal transduction | GO:0007264 | 97 | 0.038 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 73 | 0.036 | Fly |
| negative regulation of cell cycle process | GO:0010948 | 69 | 0.036 | Fly |
| spermatogenesis | GO:0007283 | 284 | 0.036 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 155 | 0.034 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 207 | 0.034 | |
| dna endoreduplication | GO:0042023 | 4 | 0.034 | |
| kinetochore organization | GO:0051383 | 2 | 0.034 | |
| regulation of cytoplasmic transport | GO:1903649 | 112 | 0.033 | |
| spermatid differentiation | GO:0048515 | 115 | 0.033 | |
| heterocycle catabolic process | GO:0046700 | 280 | 0.033 | |
| meiotic nuclear division | GO:0007126 | 115 | 0.032 | |
| positive regulation of programmed cell death | GO:0043068 | 218 | 0.032 | |
| cell type specific apoptotic process | GO:0097285 | 268 | 0.030 | |
| organelle assembly | GO:0070925 | 177 | 0.029 | |
| mitotic recombination | GO:0006312 | 3 | 0.029 | |
| ribonucleoside metabolic process | GO:0009119 | 245 | 0.029 | |
| regulation of centriole replication | GO:0046599 | 1 | 0.029 | |
| mrna export from nucleus | GO:0006406 | 11 | 0.028 | |
| maintenance of location | GO:0051235 | 89 | 0.028 | |
| cellular response to hormone stimulus | GO:0032870 | 150 | 0.027 | |
| positive regulation of intracellular transport | GO:0032388 | 70 | 0.027 | |
| cellular amine metabolic process | GO:0044106 | 44 | 0.027 | |
| nucleus organization | GO:0006997 | 45 | 0.027 | |
| centromere complex assembly | GO:0034508 | 3 | 0.027 | |
| cellular amino acid metabolic process | GO:0006520 | 103 | 0.027 | |
| dendrite development | GO:0016358 | 115 | 0.027 | |
| sister chromatid segregation | GO:0000819 | 20 | 0.026 | |
| spindle organization | GO:0007051 | 28 | 0.026 | |
| response to organic cyclic compound | GO:0014070 | 198 | 0.025 | |
| histone modification | GO:0016570 | 159 | 0.025 | |
| response to growth factor | GO:0070848 | 198 | 0.025 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 58 | 0.025 | Fly |
| mitotic g2 dna damage checkpoint | GO:0007095 | 8 | 0.025 | Fly |
| dna methylation | GO:0006306 | 43 | 0.024 | |
| regulation of intracellular protein transport | GO:0033157 | 82 | 0.024 | |
| interspecies interaction between organisms | GO:0044419 | 83 | 0.024 | |
| reciprocal dna recombination | GO:0035825 | 16 | 0.024 | |
| negative regulation of multi organism process | GO:0043901 | 68 | 0.024 | |
| protein maturation | GO:0051604 | 176 | 0.023 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 352 | 0.023 | |
| regulation of neuron death | GO:1901214 | 134 | 0.023 | |
| intra s dna damage checkpoint | GO:0031573 | 4 | 0.023 | |
| double strand break repair via nonhomologous end joining | GO:0006303 | 10 | 0.023 | |
| positive regulation of protein transport | GO:0051222 | 93 | 0.023 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 122 | 0.023 | |
| endocytosis | GO:0006897 | 168 | 0.023 | |
| regulation of establishment of protein localization | GO:0070201 | 181 | 0.022 | |
| compound eye development | GO:0048749 | 1 | 0.022 | |
| regulation of cellular amine metabolic process | GO:0033238 | 20 | 0.021 | |
| protein modification by small protein removal | GO:0070646 | 21 | 0.021 | |
| cell fate commitment | GO:0045165 | 210 | 0.021 | |
| regulation of meiosis i | GO:0060631 | 7 | 0.021 | |
| negative regulation of synapse assembly | GO:0051964 | 3 | 0.021 | |
| cellular response to growth factor stimulus | GO:0071363 | 197 | 0.021 | |
| chromosome segregation | GO:0007059 | 48 | 0.021 | |
| heterochromatin organization | GO:0070828 | 4 | 0.020 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 10 | 0.020 | |
| anatomical structure homeostasis | GO:0060249 | 145 | 0.020 | |
| dna replication | GO:0006260 | 52 | 0.020 | Worm |
| developmental cell growth | GO:0048588 | 84 | 0.020 | |
| regulation of protein targeting | GO:1903533 | 61 | 0.020 | |
| axonogenesis | GO:0007409 | 274 | 0.019 | |
| chromatin remodeling at centromere | GO:0031055 | 2 | 0.019 | |
| microtubule organizing center organization | GO:0031023 | 28 | 0.019 | |
| negative regulation of phagocytosis | GO:0050765 | 4 | 0.019 | |
| regulation of cellular catabolic process | GO:0031329 | 242 | 0.019 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 247 | 0.019 | |
| dna alkylation | GO:0006305 | 43 | 0.019 | |
| germ cell development | GO:0007281 | 185 | 0.019 | |
| digestive system development | GO:0055123 | 200 | 0.019 | |
| cellular protein catabolic process | GO:0044257 | 155 | 0.019 | |
| dna dependent dna replication | GO:0006261 | 24 | 0.018 | |
| neuron projection extension | GO:1990138 | 64 | 0.018 | |
| ribonucleoprotein complex localization | GO:0071166 | 1 | 0.018 | |
| histone mrna metabolic process | GO:0008334 | 3 | 0.018 | |
| homeostasis of number of cells | GO:0048872 | 210 | 0.018 | |
| positive regulation of protein modification process | GO:0031401 | 299 | 0.018 | |
| regulation of microtubule based process | GO:0032886 | 52 | 0.018 | |
| viral process | GO:0016032 | 41 | 0.018 | |
| positive regulation of cell death | GO:0010942 | 224 | 0.017 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 143 | 0.017 | |
| cellular ketone metabolic process | GO:0042180 | 84 | 0.017 | |
| receptor mediated endocytosis | GO:0006898 | 51 | 0.016 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 226 | 0.016 | |
| ras protein signal transduction | GO:0007265 | 77 | 0.016 | |
| microtubule cytoskeleton organization | GO:0000226 | 157 | 0.016 | |
| cellular response to transforming growth factor beta stimulus | GO:0071560 | 88 | 0.016 | |
| camera type eye development | GO:0043010 | 266 | 0.016 | |
| lung development | GO:0030324 | 164 | 0.016 | |
| male gonad development | GO:0008584 | 88 | 0.015 | |
| neuron migration | GO:0001764 | 122 | 0.015 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 16 | 0.015 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 5 | 0.015 | |
| dna damage checkpoint | GO:0000077 | 26 | 0.015 | Fly |
| nucleoside metabolic process | GO:0009116 | 246 | 0.015 | |
| organophosphate catabolic process | GO:0046434 | 232 | 0.015 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.015 | |
| transcription factor import into nucleus | GO:0042991 | 26 | 0.015 | |
| aromatic compound catabolic process | GO:0019439 | 286 | 0.015 | |
| negative regulation of b cell differentiation | GO:0045578 | 4 | 0.015 | |
| regulation of protein localization | GO:0032880 | 231 | 0.015 | |
| rna export from nucleus | GO:0006405 | 15 | 0.015 | |
| chromatin remodeling | GO:0006338 | 32 | 0.014 | |
| positive regulation of peptidase activity | GO:0010952 | 49 | 0.014 | |
| amine metabolic process | GO:0009308 | 45 | 0.014 | |
| purine nucleoside metabolic process | GO:0042278 | 241 | 0.014 | |
| regulation of endopeptidase activity | GO:0052548 | 89 | 0.014 | |
| protein processing | GO:0016485 | 163 | 0.014 | |
| dna replication checkpoint | GO:0000076 | 2 | 0.014 | Fly |
| cell division | GO:0051301 | 120 | 0.014 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 66 | 0.014 | |
| ribonucleotide metabolic process | GO:0009259 | 291 | 0.014 | |
| centrosome organization | GO:0051297 | 26 | 0.014 | |
| regulation of ras protein signal transduction | GO:0046578 | 114 | 0.014 | |
| regulation of protein import into nucleus | GO:0042306 | 52 | 0.014 | |
| regulation of nuclear division | GO:0051783 | 56 | 0.014 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 91 | 0.014 | |
| synaptonemal complex organization | GO:0070193 | 15 | 0.014 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 192 | 0.014 | |
| negative regulation of neuron death | GO:1901215 | 98 | 0.013 | |
| synaptonemal complex assembly | GO:0007130 | 13 | 0.013 | |
| non recombinational repair | GO:0000726 | 10 | 0.013 | |
| regulation of apoptotic signaling pathway | GO:2001233 | 197 | 0.013 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 57 | 0.013 | |
| negative regulation of organelle organization | GO:0010639 | 90 | 0.013 | |
| regulation of neuron apoptotic process | GO:0043523 | 122 | 0.013 | |
| engulfment of apoptotic cell | GO:0043652 | 3 | 0.013 | |
| neural precursor cell proliferation | GO:0061351 | 121 | 0.013 | |
| dna modification | GO:0006304 | 50 | 0.013 | |
| humoral immune response | GO:0006959 | 57 | 0.013 | |
| chemotaxis | GO:0006935 | 247 | 0.013 | |
| regulation of symbiosis encompassing mutualism through parasitism | GO:0043903 | 52 | 0.013 | |
| purine ribonucleoside metabolic process | GO:0046128 | 241 | 0.013 | |
| cellular response to organonitrogen compound | GO:0071417 | 145 | 0.013 | |
| regulation of cell cycle g1 s phase transition | GO:1902806 | 35 | 0.013 | |
| respiratory tube development | GO:0030323 | 167 | 0.013 | |
| negative regulation of protein metabolic process | GO:0051248 | 282 | 0.013 | |
| cellular protein complex disassembly | GO:0043624 | 36 | 0.013 | |
| regulation of chromatin modification | GO:1903308 | 57 | 0.012 | |
| spermatid development | GO:0007286 | 108 | 0.012 | |
| response to oxidative stress | GO:0006979 | 123 | 0.012 | |
| positive regulation of cell development | GO:0010720 | 237 | 0.012 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 194 | 0.012 | |
| respiratory system development | GO:0060541 | 190 | 0.012 | |
| definitive hemopoiesis | GO:0060216 | 20 | 0.012 | |
| response to inorganic substance | GO:0010035 | 96 | 0.012 | |
| innate immune response | GO:0045087 | 157 | 0.012 | |
| neuron apoptotic process | GO:0051402 | 142 | 0.012 | |
| regulation of dna endoreduplication | GO:0032875 | 3 | 0.012 | |
| regulation of protein complex disassembly | GO:0043244 | 28 | 0.012 | |
| positive regulation of gtp catabolic process | GO:0033126 | 85 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 338 | 0.012 | |
| antimicrobial peptide production | GO:0002775 | 2 | 0.012 | |
| regulation of exit from mitosis | GO:0007096 | 1 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 311 | 0.012 | |
| ear development | GO:0043583 | 200 | 0.012 | |
| heterochromatin assembly | GO:0031507 | 2 | 0.012 | |
| proteasomal protein catabolic process | GO:0010498 | 98 | 0.012 | |
| regulation of cell activation | GO:0050865 | 289 | 0.011 | |
| viral life cycle | GO:0019058 | 36 | 0.011 | |
| regulation of meiotic cell cycle | GO:0051445 | 34 | 0.011 | |
| neuron death | GO:0070997 | 154 | 0.011 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 48 | 0.011 | Fly |
| striated muscle contraction | GO:0006941 | 45 | 0.011 | |
| protein modification by small protein conjugation | GO:0032446 | 187 | 0.011 | |
| ribose phosphate metabolic process | GO:0019693 | 291 | 0.011 | |
| epidermis development | GO:0008544 | 187 | 0.011 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 114 | 0.011 | |
| regulation of peptidase activity | GO:0052547 | 96 | 0.011 | |
| regulation of protein localization to nucleus | GO:1900180 | 60 | 0.011 | |
| positive regulation of apoptotic process | GO:0043065 | 217 | 0.011 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 106 | 0.011 | |
| organic hydroxy compound metabolic process | GO:1901615 | 203 | 0.011 | |
| telencephalon development | GO:0021537 | 186 | 0.011 | |
| negative regulation of chromatin silencing | GO:0031936 | 1 | 0.011 | |
| regulation of neuron projection development | GO:0010975 | 169 | 0.011 | |
| developmental growth involved in morphogenesis | GO:0060560 | 138 | 0.011 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 83 | 0.011 | |
| positive regulation of nucleotide catabolic process | GO:0030813 | 88 | 0.011 | |
| reciprocal meiotic recombination | GO:0007131 | 16 | 0.010 | |
| positive regulation of intracellular protein transport | GO:0090316 | 42 | 0.010 | |
| fertilization | GO:0009566 | 127 | 0.010 | |
| regulation of cellular response to growth factor stimulus | GO:0090287 | 82 | 0.010 | |
| axon guidance | GO:0007411 | 141 | 0.010 | |
| regulation of kinase activity | GO:0043549 | 249 | 0.010 | |
| regulation of cytoskeleton organization | GO:0051493 | 122 | 0.010 | |
| organonitrogen compound catabolic process | GO:1901565 | 264 | 0.010 | |
| apoptotic signaling pathway | GO:0097190 | 306 | 0.010 | |
| regulation of nucleotide metabolic process | GO:0006140 | 169 | 0.010 | |
