| rna metabolic process | GO:0016070 | 406 | 0.283 | Mouse |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 161 | 0.128 | |
| organelle organization | GO:0006996 | 266 | 0.107 | Fly |
| regulation of rna metabolic process | GO:0051252 | 391 | 0.091 | Mouse |
| negative regulation of metabolic process | GO:0009892 | 331 | 0.078 | |
| immune system process | GO:0002376 | 204 | 0.069 | |
| dna packaging | GO:0006323 | 4 | 0.064 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.063 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.055 | |
| response to wounding | GO:0009611 | 254 | 0.053 | |
| positive regulation of response to stimulus | GO:0048584 | 285 | 0.053 | |
| negative regulation of biosynthetic process | GO:0009890 | 168 | 0.052 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 153 | 0.052 | |
| chromatin assembly or disassembly | GO:0006333 | 1 | 0.051 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 252 | 0.050 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 161 | 0.046 | |
| cellular component assembly | GO:0022607 | 360 | 0.045 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.044 | |
| positive regulation of rna metabolic process | GO:0051254 | 203 | 0.043 | Mouse |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.042 | Fly |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.041 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 148 | 0.041 | |
| cell motility | GO:0048870 | 202 | 0.041 | |
| neuron projection development | GO:0031175 | 273 | 0.040 | |
| protein complex biogenesis | GO:0070271 | 263 | 0.039 | |
| transcription dna templated | GO:0006351 | 377 | 0.038 | |
| negative regulation of transcription dna templated | GO:0045892 | 116 | 0.037 | |
| response to peptide | GO:1901652 | 292 | 0.037 | |
| apoptotic process | GO:0006915 | 381 | 0.036 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.036 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.035 | |
| negative regulation of cellular metabolic process | GO:0031324 | 281 | 0.034 | |
| protein complex assembly | GO:0006461 | 263 | 0.034 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 118 | 0.034 | |
| neuron development | GO:0048666 | 286 | 0.034 | |
| response to decreased oxygen levels | GO:0036293 | 237 | 0.034 | |
| regulation of protein metabolic process | GO:0051246 | 289 | 0.032 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.032 | |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.032 | |
| cellular response to stress | GO:0033554 | 269 | 0.032 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 234 | 0.031 | |
| regulation of phosphate metabolic process | GO:0019220 | 349 | 0.031 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.030 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 75 | 0.030 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 117 | 0.030 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 262 | 0.030 | |
| single organism reproductive process | GO:0044702 | 297 | 0.029 | |
| cell projection organization | GO:0030030 | 302 | 0.029 | |
| anatomical structure morphogenesis | GO:0009653 | 298 | 0.029 | |
| tissue development | GO:0009888 | 252 | 0.028 | |
| locomotion | GO:0040011 | 237 | 0.028 | |
| female pregnancy | GO:0007565 | 122 | 0.028 | |
| smooth muscle cell proliferation | GO:0048659 | 77 | 0.028 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 167 | 0.027 | |
| histone h3 acetylation | GO:0043966 | 2 | 0.027 | |
| single organism organelle organization | GO:1902589 | 180 | 0.027 | Fly |
| protein complex subunit organization | GO:0071822 | 302 | 0.027 | Fly |
| positive regulation of protein metabolic process | GO:0051247 | 178 | 0.026 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.026 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.026 | |
| neuron differentiation | GO:0030182 | 368 | 0.025 | |
| reproductive process | GO:0022414 | 372 | 0.025 | |
| cellular chemical homeostasis | GO:0055082 | 247 | 0.025 | |
| homeostatic process | GO:0042592 | 331 | 0.025 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 141 | 0.025 | |
| ras protein signal transduction | GO:0007265 | 29 | 0.025 | |
| response to peptide hormone | GO:0043434 | 278 | 0.025 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 197 | 0.025 | |
| defense response | GO:0006952 | 194 | 0.025 | |
| sexual reproduction | GO:0019953 | 148 | 0.024 | |
| rna biosynthetic process | GO:0032774 | 380 | 0.024 | |
| response to oxygen levels | GO:0070482 | 265 | 0.024 | |
| cellular response to endogenous stimulus | GO:0071495 | 377 | 0.024 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.024 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 197 | 0.023 | |
| neurological system process | GO:0050877 | 219 | 0.023 | |
| regulation of cell motility | GO:2000145 | 131 | 0.023 | |
| negative regulation of rna metabolic process | GO:0051253 | 123 | 0.023 | |
| protein oligomerization | GO:0051259 | 191 | 0.023 | |
| negative regulation of rna splicing | GO:0033119 | 3 | 0.023 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.023 | |
| response to ionizing radiation | GO:0010212 | 59 | 0.023 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.023 | |
| chemical homeostasis | GO:0048878 | 292 | 0.023 | |
| response to hypoxia | GO:0001666 | 231 | 0.023 | |
| regulation of cell proliferation | GO:0042127 | 359 | 0.023 | |
| regulation of cellular localization | GO:0060341 | 263 | 0.023 | |
| regulation of phosphorus metabolic process | GO:0051174 | 349 | 0.022 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 262 | 0.022 | |
| positive regulation of protein kinase activity | GO:0045860 | 73 | 0.022 | |
| cellular response to cytokine stimulus | GO:0071345 | 127 | 0.022 | |
| positive regulation of transport | GO:0051050 | 245 | 0.022 | |
| response to temperature stimulus | GO:0009266 | 94 | 0.022 | |
| amine metabolic process | GO:0009308 | 38 | 0.021 | |
| positive regulation of phosphorylation | GO:0042327 | 177 | 0.021 | |
| positive regulation of cell communication | GO:0010647 | 271 | 0.021 | |
| positive regulation of cell proliferation | GO:0008284 | 249 | 0.021 | |
| cellular homeostasis | GO:0019725 | 252 | 0.021 | |
| response to nutrient levels | GO:0031667 | 370 | 0.020 | |
| cellular component movement | GO:0006928 | 248 | 0.020 | |
| regulation of apoptotic process | GO:0042981 | 335 | 0.020 | |
| response to metal ion | GO:0010038 | 253 | 0.020 | |
| response to inorganic substance | GO:0010035 | 377 | 0.020 | |
| innate immune response | GO:0045087 | 35 | 0.019 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.019 | |
| response to corticosteroid | GO:0031960 | 235 | 0.019 | |
| protein phosphorylation | GO:0006468 | 345 | 0.019 | |
| regulation of signal transduction | GO:0009966 | 318 | 0.019 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.019 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.019 | |
| multicellular organism reproduction | GO:0032504 | 233 | 0.019 | |
| regulation of protein import into nucleus | GO:0042306 | 24 | 0.019 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.019 | |
| synaptic transmission | GO:0007268 | 235 | 0.019 | |
| response to heat | GO:0009408 | 60 | 0.019 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.019 | Mouse |
| growth | GO:0040007 | 165 | 0.018 | |
| single organism intracellular transport | GO:1902582 | 166 | 0.018 | |
| regulation of phosphorylation | GO:0042325 | 248 | 0.018 | |
| positive regulation of transcription factor import into nucleus | GO:0042993 | 4 | 0.018 | |
| regulation of programmed cell death | GO:0043067 | 341 | 0.018 | |
| small gtpase mediated signal transduction | GO:0007264 | 36 | 0.018 | |
| chromosome organization | GO:0051276 | 36 | 0.018 | |
| positive regulation of protein modification process | GO:0031401 | 142 | 0.018 | |
| response to radiation | GO:0009314 | 137 | 0.018 | |
| positive regulation of transferase activity | GO:0051347 | 81 | 0.017 | |
| dna metabolic process | GO:0006259 | 96 | 0.017 | |
| peptidyl amino acid modification | GO:0018193 | 126 | 0.017 | |
| aging | GO:0007568 | 241 | 0.017 | |
| axis specification | GO:0009798 | 4 | 0.017 | |
| central nervous system development | GO:0007417 | 311 | 0.017 | |
| response to cytokine | GO:0034097 | 215 | 0.017 | |
| fertilization | GO:0009566 | 3 | 0.017 | |
| intracellular protein transport | GO:0006886 | 79 | 0.016 | |
| regulation of cellular protein metabolic process | GO:0032268 | 267 | 0.016 | |
| regulation of molecular function | GO:0065009 | 398 | 0.016 | |
| negative regulation of viral process | GO:0048525 | 4 | 0.016 | |
| vesicle mediated transport | GO:0016192 | 181 | 0.016 | |
| regulation of catalytic activity | GO:0050790 | 304 | 0.016 | |
| inflammatory response | GO:0006954 | 150 | 0.016 | |
| positive regulation of protein phosphorylation | GO:0001934 | 135 | 0.016 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.016 | Mouse |
| cellular response to nitrogen compound | GO:1901699 | 210 | 0.015 | |
| positive regulation of apoptotic process | GO:0043065 | 154 | 0.015 | |
| regulation of response to stress | GO:0080134 | 126 | 0.015 | |
| intracellular transport | GO:0046907 | 185 | 0.015 | |
| cellular response to biotic stimulus | GO:0071216 | 59 | 0.015 | |
| developmental growth | GO:0048589 | 100 | 0.015 | |
| developmental growth involved in morphogenesis | GO:0060560 | 33 | 0.015 | |
| positive regulation of catalytic activity | GO:0043085 | 184 | 0.015 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.015 | |
| positive regulation of transcription dna templated | GO:0045893 | 197 | 0.015 | |
| axis elongation | GO:0003401 | 2 | 0.015 | |
| rhythmic process | GO:0048511 | 156 | 0.015 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.015 | |
| ion homeostasis | GO:0050801 | 212 | 0.015 | |
| response to oxidative stress | GO:0006979 | 186 | 0.015 | |
| regulation of cell development | GO:0060284 | 263 | 0.015 | |
| cytoplasmic transport | GO:0016482 | 115 | 0.015 | |
| spermatogenesis | GO:0007283 | 99 | 0.015 | |
| multi multicellular organism process | GO:0044706 | 138 | 0.015 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 1 | 0.015 | |
| positive regulation of signaling | GO:0023056 | 270 | 0.015 | |
| negative regulation of cell differentiation | GO:0045596 | 99 | 0.015 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 138 | 0.014 | |
| negative regulation of developmental process | GO:0051093 | 125 | 0.014 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.014 | |
| reproduction | GO:0000003 | 245 | 0.014 | |
| secretion | GO:0046903 | 307 | 0.014 | |
| cytoskeleton organization | GO:0007010 | 111 | 0.014 | Fly |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 247 | 0.014 | |
| cell part morphogenesis | GO:0032990 | 123 | 0.014 | |
| response to acid chemical | GO:0001101 | 222 | 0.014 | |
| positive regulation of kinase activity | GO:0033674 | 77 | 0.014 | |
| cellular response to organic cyclic compound | GO:0071407 | 202 | 0.014 | |
| regulation of cellular component movement | GO:0051270 | 150 | 0.014 | |
| negative regulation of multicellular organismal process | GO:0051241 | 203 | 0.013 | |
| leukocyte activation | GO:0045321 | 76 | 0.013 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.013 | |
| positive regulation of mapk cascade | GO:0043410 | 92 | 0.013 | |
| activation of protein kinase activity | GO:0032147 | 47 | 0.013 | |
| regulation of smooth muscle cell proliferation | GO:0048660 | 75 | 0.013 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 64 | 0.013 | |
| regulation of cellular component organization | GO:0051128 | 368 | 0.013 | |
| response to glucose | GO:0009749 | 136 | 0.013 | |
| positive regulation of programmed cell death | GO:0043068 | 157 | 0.013 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 2 | 0.013 | |
| cell cycle checkpoint | GO:0000075 | 2 | 0.013 | |
| regulation of transferase activity | GO:0051338 | 123 | 0.013 | |
| organ morphogenesis | GO:0009887 | 75 | 0.013 | |
| regulation of establishment of protein localization | GO:0070201 | 69 | 0.013 | |
| macromolecule localization | GO:0033036 | 252 | 0.013 | |
| response to biotic stimulus | GO:0009607 | 226 | 0.013 | |
| anterior posterior pattern specification | GO:0009952 | 1 | 0.013 | |
| regulation of cell migration | GO:0030334 | 128 | 0.013 | |
| cell projection morphogenesis | GO:0048858 | 123 | 0.013 | |
| regulation of dna metabolic process | GO:0051052 | 60 | 0.012 | |
| cellular response to growth factor stimulus | GO:0071363 | 162 | 0.012 | |
| intrinsic apoptotic signaling pathway in response to dna damage | GO:0008630 | 1 | 0.012 | |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.012 | |
| protein transport | GO:0015031 | 132 | 0.012 | |
| regulation of intracellular signal transduction | GO:1902531 | 218 | 0.012 | |
| regulation of protein transport | GO:0051223 | 68 | 0.012 | |
| positive regulation of nervous system development | GO:0051962 | 178 | 0.012 | |
| male gamete generation | GO:0048232 | 99 | 0.012 | |
| feeding behavior | GO:0007631 | 53 | 0.012 | |
| positive regulation of cell death | GO:0010942 | 184 | 0.012 | |
| response to extracellular stimulus | GO:0009991 | 380 | 0.012 | |
| negative regulation of nervous system development | GO:0051961 | 79 | 0.012 | |
| cell morphogenesis | GO:0000902 | 142 | 0.012 | |
| heart morphogenesis | GO:0003007 | 3 | 0.012 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.012 | |
| negative regulation of cell development | GO:0010721 | 82 | 0.012 | |
| single fertilization | GO:0007338 | 3 | 0.012 | |
| response to estrogen | GO:0043627 | 232 | 0.012 | |
| cell morphogenesis involved in neuron differentiation | GO:0048667 | 106 | 0.012 | |
| covalent chromatin modification | GO:0016569 | 30 | 0.012 | |
| dendrite development | GO:0016358 | 72 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.012 | |
| immune response | GO:0006955 | 104 | 0.012 | |
| lipid metabolic process | GO:0006629 | 283 | 0.012 | |
| response to ethanol | GO:0045471 | 162 | 0.012 | |
| cellular response to oxygen levels | GO:0071453 | 60 | 0.012 | |
| response to amino acid | GO:0043200 | 75 | 0.011 | |
| negative regulation of cell death | GO:0060548 | 229 | 0.011 | |
| ovulation cycle | GO:0042698 | 67 | 0.011 | |
| response to glucocorticoid | GO:0051384 | 223 | 0.011 | |
| eye morphogenesis | GO:0048592 | 4 | 0.011 | |
| regulation of growth | GO:0040008 | 105 | 0.011 | |
| intracellular signal transduction | GO:0035556 | 314 | 0.011 | |
| muscle cell proliferation | GO:0033002 | 84 | 0.011 | |
| programmed cell death | GO:0012501 | 392 | 0.011 | |
| rna localization | GO:0006403 | 4 | 0.011 | |
| embryo development | GO:0009790 | 49 | 0.011 | |
| calcium ion homeostasis | GO:0055074 | 162 | 0.011 | |
| behavior | GO:0007610 | 205 | 0.011 | |
| cellular response to abiotic stimulus | GO:0071214 | 85 | 0.011 | |
| positive regulation of cell differentiation | GO:0045597 | 217 | 0.011 | |
| positive regulation of developmental process | GO:0051094 | 283 | 0.011 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.011 | |
| meiotic cell cycle process | GO:1903046 | 3 | 0.011 | |
| cellular response to organonitrogen compound | GO:0071417 | 197 | 0.011 | |
| regulation of intracellular transport | GO:0032386 | 65 | 0.010 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 2 | 0.010 | |
| regulation of neurogenesis | GO:0050767 | 247 | 0.010 | |
| brain development | GO:0007420 | 247 | 0.010 | |
| cellular cation homeostasis | GO:0030003 | 180 | 0.010 | |
| cellular component morphogenesis | GO:0032989 | 155 | 0.010 | |
| response to estradiol | GO:0032355 | 164 | 0.010 | |
| histone modification | GO:0016570 | 30 | 0.010 | |
| multicellular organism growth | GO:0035264 | 1 | 0.010 | |
| negative regulation of cell communication | GO:0010648 | 158 | 0.010 | |
| chromatin modification | GO:0016568 | 33 | 0.010 | |
| positive regulation of gene expression | GO:0010628 | 244 | 0.010 | Mouse |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.010 | |
