| rna biosynthetic process | GO:0032774 | 380 | 0.159 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 234 | 0.144 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 252 | 0.142 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.136 | |
| regulation of rna metabolic process | GO:0051252 | 391 | 0.133 | |
| transcription dna templated | GO:0006351 | 377 | 0.122 | |
| rna metabolic process | GO:0016070 | 406 | 0.113 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.105 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.066 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.065 | |
| negative regulation of metabolic process | GO:0009892 | 331 | 0.062 | Fly |
| inorganic cation transmembrane transport | GO:0098662 | 202 | 0.061 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 1 | 0.058 | |
| response to hexose | GO:0009746 | 144 | 0.058 | |
| regulation of molecular function | GO:0065009 | 398 | 0.055 | |
| immune system process | GO:0002376 | 204 | 0.052 | |
| regulation of phosphorylation | GO:0042325 | 248 | 0.049 | |
| response to wounding | GO:0009611 | 254 | 0.049 | |
| response to acid chemical | GO:0001101 | 222 | 0.047 | |
| chemical homeostasis | GO:0048878 | 292 | 0.047 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.047 | |
| response to monosaccharide | GO:0034284 | 159 | 0.046 | |
| regulation of protein import into nucleus | GO:0042306 | 24 | 0.042 | |
| amine metabolic process | GO:0009308 | 38 | 0.040 | |
| single organism intracellular transport | GO:1902582 | 166 | 0.039 | |
| neuron projection development | GO:0031175 | 273 | 0.038 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.038 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.038 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 262 | 0.037 | |
| regulation of phosphorus metabolic process | GO:0051174 | 349 | 0.036 | |
| anatomical structure morphogenesis | GO:0009653 | 298 | 0.035 | |
| protein ubiquitination | GO:0016567 | 28 | 0.035 | |
| protein phosphorylation | GO:0006468 | 345 | 0.032 | |
| cellular component assembly | GO:0022607 | 360 | 0.032 | |
| response to thyroxine | GO:0097068 | 3 | 0.029 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 28 | 0.029 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.029 | |
| cation transmembrane transport | GO:0098655 | 263 | 0.029 | |
| transmembrane transport | GO:0055085 | 412 | 0.029 | |
| positive regulation of synaptic transmission | GO:0050806 | 62 | 0.028 | |
| cellular chemical homeostasis | GO:0055082 | 247 | 0.027 | |
| intracellular transport | GO:0046907 | 185 | 0.027 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.026 | |
| nucleocytoplasmic transport | GO:0006913 | 48 | 0.026 | |
| neuron differentiation | GO:0030182 | 368 | 0.025 | |
| regulation of nervous system development | GO:0051960 | 264 | 0.025 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.025 | |
| regulation of protein transport | GO:0051223 | 68 | 0.025 | |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.024 | |
| inorganic ion transmembrane transport | GO:0098660 | 229 | 0.023 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.023 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 161 | 0.023 | |
| macromolecule localization | GO:0033036 | 252 | 0.023 | |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.022 | |
| regulation of nucleotide biosynthetic process | GO:0030808 | 47 | 0.022 | |
| glucose homeostasis | GO:0042593 | 75 | 0.022 | |
| oxidation reduction process | GO:0055114 | 304 | 0.022 | |
| negative regulation of rna metabolic process | GO:0051253 | 123 | 0.021 | |
| positive regulation of voltage gated calcium channel activity | GO:1901387 | 1 | 0.021 | |
| cellular macromolecule localization | GO:0070727 | 122 | 0.021 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.021 | |
| positive regulation of multicellular organismal process | GO:0051240 | 387 | 0.021 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 262 | 0.021 | |
| negative regulation of skeletal muscle cell differentiation | GO:2001015 | 1 | 0.021 | |
| cytoplasmic transport | GO:0016482 | 115 | 0.021 | |
| protein localization | GO:0008104 | 191 | 0.021 | |
| positive regulation of transcription dna templated | GO:0045893 | 197 | 0.020 | |
| regulation of cellular localization | GO:0060341 | 263 | 0.020 | |
| negative regulation of response to stimulus | GO:0048585 | 155 | 0.020 | |
| negative regulation of transcription dna templated | GO:0045892 | 116 | 0.019 | |
| cellular component morphogenesis | GO:0032989 | 155 | 0.019 | |
| cellular cation homeostasis | GO:0030003 | 180 | 0.019 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.019 | |
| regulation of protein modification process | GO:0031399 | 194 | 0.018 | |
| regulation of ion transmembrane transporter activity | GO:0032412 | 48 | 0.018 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.018 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.018 | |
| cell projection organization | GO:0030030 | 302 | 0.017 | |
| negative regulation of multicellular organismal process | GO:0051241 | 203 | 0.017 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 167 | 0.017 | |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.017 | |
| organelle organization | GO:0006996 | 266 | 0.017 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.017 | |
| positive regulation of camp metabolic process | GO:0030816 | 31 | 0.017 | |
| pyrimidine ribonucleoside triphosphate biosynthetic process | GO:0009209 | 2 | 0.016 | |
| protein localization to endoplasmic reticulum | GO:0070972 | 1 | 0.016 | |
| positive regulation of developmental process | GO:0051094 | 283 | 0.016 | |
| homeostatic process | GO:0042592 | 331 | 0.016 | |
| response to nutrient levels | GO:0031667 | 370 | 0.016 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 148 | 0.016 | |
| cellular catabolic process | GO:0044248 | 295 | 0.016 | Fly |
| cellular response to hexose stimulus | GO:0071331 | 65 | 0.016 | |
| positive regulation of protein metabolic process | GO:0051247 | 178 | 0.015 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 72 | 0.015 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.015 | |
| cellular homeostasis | GO:0019725 | 252 | 0.015 | |
| negative regulation of protein modification by small protein conjugation or removal | GO:1903321 | 4 | 0.015 | |
| response to oxygen levels | GO:0070482 | 265 | 0.015 | |
| cellular response to acid chemical | GO:0071229 | 75 | 0.014 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.014 | |
| cellular protein localization | GO:0034613 | 122 | 0.014 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 197 | 0.014 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 36 | 0.014 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 247 | 0.014 | |
| positive regulation of phosphorylation | GO:0042327 | 177 | 0.014 | |
| regulation of nucleotide metabolic process | GO:0006140 | 117 | 0.014 | |
| positive regulation of molecular function | GO:0044093 | 230 | 0.013 | |
| regulation of cell development | GO:0060284 | 263 | 0.013 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 141 | 0.013 | |
| single organism organelle organization | GO:1902589 | 180 | 0.013 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.013 | |
| carbohydrate homeostasis | GO:0033500 | 75 | 0.013 | |
| regulation of phosphate metabolic process | GO:0019220 | 349 | 0.013 | |
| regulation of neuron projection development | GO:0010975 | 161 | 0.013 | |
| programmed cell death | GO:0012501 | 392 | 0.013 | |
| neuron development | GO:0048666 | 286 | 0.012 | |
| spliceosomal complex assembly | GO:0000245 | 2 | 0.012 | |
| response to activity | GO:0014823 | 73 | 0.012 | |
| regulation of establishment of protein localization | GO:0070201 | 69 | 0.012 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.012 | |
| negative regulation of cell differentiation | GO:0045596 | 99 | 0.012 | |
| central nervous system development | GO:0007417 | 311 | 0.011 | |
| response to other organism | GO:0051707 | 220 | 0.011 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 153 | 0.011 | |
| negative regulation of molecular function | GO:0044092 | 133 | 0.011 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.011 | |
| regulation of calcium ion transmembrane transport | GO:1903169 | 18 | 0.011 | |
| camp metabolic process | GO:0046058 | 63 | 0.011 | |
| response to ketone | GO:1901654 | 182 | 0.011 | |
| cellular response to oxygen levels | GO:0071453 | 60 | 0.011 | |
| cellular response to stress | GO:0033554 | 269 | 0.011 | |
| ion transmembrane transport | GO:0034220 | 365 | 0.011 | |
| ion homeostasis | GO:0050801 | 212 | 0.011 | |
| metal ion transport | GO:0030001 | 289 | 0.011 | |
| cellular response to carbohydrate stimulus | GO:0071322 | 72 | 0.011 | |
| maintenance of protein localization in organelle | GO:0072595 | 1 | 0.011 | |
| response to glucocorticoid | GO:0051384 | 223 | 0.011 | |
| positive regulation of gene expression | GO:0010628 | 244 | 0.011 | |
| cell morphogenesis | GO:0000902 | 142 | 0.011 | |
| cellular glucose homeostasis | GO:0001678 | 66 | 0.010 | |
| cellular ion homeostasis | GO:0006873 | 184 | 0.010 | |
| regulation of signal transduction | GO:0009966 | 318 | 0.010 | |
| protein import into nucleus | GO:0006606 | 35 | 0.010 | |
| cellular response to monosaccharide stimulus | GO:0071326 | 67 | 0.010 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 35 | 0.010 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.010 | |
