Rattus norvegicus

7 known processes

Pdlim1

PDZ and LIM domain 1

(Aliases: CLP36)

Pdlim1 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
apoptotic processGO:00069153810.335
programmed cell deathGO:00125013920.296
regulation of cellular component organizationGO:00511283680.267
Rat
regulation of apoptotic processGO:00429813350.197
rna metabolic processGO:00160704060.183
Mouse
positive regulation of cell communicationGO:00106472710.179
regulation of programmed cell deathGO:00430673410.168
response to other organismGO:00517072200.151
negative regulation of apoptotic processGO:00430661810.136
positive regulation of transportGO:00510502450.125
intracellular signal transductionGO:00355563140.107
regulation of nucleic acid templated transcriptionGO:19035063800.106
Mouse
positive regulation of cellular component organizationGO:00511302000.105
reproductive processGO:00224143720.102
locomotionGO:00400112370.102
oxoacid metabolic processGO:00434362900.093
vesicle mediated transportGO:00161921810.092
cellular response to stressGO:00335542690.091
macromolecular complex subunit organizationGO:00439333390.089
cell cell signalingGO:00072673350.088
Rat
positive regulation of phosphorus metabolic processGO:00105622620.088
regulation of cell proliferationGO:00421273590.087
cellular amino acid metabolic processGO:00065201070.086
response to peptide hormoneGO:00434342780.084
neuron differentiationGO:00301823680.081
Rat
negative regulation of metabolic processGO:00098923310.080
cellular component biogenesisGO:00440853680.079
Rat Fly
macromolecule localizationGO:00330362520.077
positive regulation of developmental processGO:00510942830.077
Rat
regulation of locomotionGO:00400121480.076
response to inorganic substanceGO:00100353770.075
regulation of phosphorus metabolic processGO:00511743490.069
tissue developmentGO:00098882520.069
muscle structure developmentGO:0061061870.068
Fly
regulation of cell differentiationGO:00455953200.067
Rat
anatomical structure morphogenesisGO:00096532980.066
Rat Fly
negative regulation of cellular metabolic processGO:00313242810.066
regulation of system processGO:00440572080.064
nucleic acid templated transcriptionGO:00976593790.064
Mouse
regulation of phosphate metabolic processGO:00192203490.062
cellular amine metabolic processGO:0044106380.062
neuron developmentGO:00486662860.061
Rat
regulation of transcription dna templatedGO:00063553740.060
Mouse
organic acid metabolic processGO:00060822920.059
regulation of cellular amine metabolic processGO:003323880.058
cell projection organizationGO:00300303020.057
Rat
localization of cellGO:00516742020.057
transcription dna templatedGO:00063513770.056
Mouse
single organism cellular localizationGO:19025801020.055
regulation of catalytic activityGO:00507903040.055
organonitrogen compound biosynthetic processGO:19015661670.054
cell migrationGO:00164771970.054
actin cytoskeleton organizationGO:0030036730.054
Fly
negative regulation of nucleobase containing compound metabolic processGO:00459341530.054
positive regulation of multicellular organismal processGO:00512403870.054
Rat
regulation of molecular functionGO:00650093980.054
cellular ketone metabolic processGO:0042180510.052
response to hypoxiaGO:00016662310.052
regulation of rna biosynthetic processGO:20011413810.051
Mouse
positive regulation of cell deathGO:00109421840.051
positive regulation of cellular amino acid metabolic processGO:004576410.051
carboxylic acid metabolic processGO:00197522890.051
positive regulation of response to stimulusGO:00485842850.051
positive regulation of protein phosphorylationGO:00019341350.050
regulation of secretion by cellGO:19035302080.050
regulation of cellular ketone metabolic processGO:0010565270.050
cell motilityGO:00488702020.050
regulation of phosphorylationGO:00423252480.050
hormone transportGO:00099141210.049
negative regulation of multicellular organismal processGO:00512412030.049
multi organism reproductive processGO:00447032620.049
protein phosphorylationGO:00064683450.049
single organism organelle organizationGO:19025891800.049
Fly
vascular process in circulatory systemGO:0003018960.048
organelle organizationGO:00069962660.048
Fly
agingGO:00075682410.048
positive regulation of signalingGO:00230562700.048
signal releaseGO:00230611450.048
protein complex subunit organizationGO:00718223020.048
blood circulationGO:00080151830.048
response to metal ionGO:00100382530.048
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169850.047
regulation of protein phosphorylationGO:00019321830.047
response to peptideGO:19016522920.047
catabolic processGO:00090563510.047
positive regulation of nitrogen compound metabolic processGO:00511733340.046
regulation of intracellular signal transductionGO:19025312180.046
regulation of protein metabolic processGO:00512462890.046
positive regulation of catalytic activityGO:00430851840.046
regulation of cellular amino acid metabolic processGO:000652120.045
negative regulation of biosynthetic processGO:00098901680.045
cellular component assemblyGO:00226073600.044
Rat Fly
protein localizationGO:00081041910.044
positive regulation of cellular amine metabolic processGO:003324030.043
calcium ion transmembrane transportGO:0070588700.043
protein complex biogenesisGO:00702712630.042
lipid metabolic processGO:00066292830.042
negative regulation of programmed cell deathGO:00430691830.041
regulation of cellular localizationGO:00603412630.041
cellular catabolic processGO:00442482950.040
immune system processGO:00023762040.040
protein complex assemblyGO:00064612630.040
behaviorGO:00076102050.039
positive regulation of cellular biosynthetic processGO:00313282950.039
positive regulation of phosphorylationGO:00423271770.038
secretion by cellGO:00329402480.038
regulation of multicellular organismal developmentGO:20000263760.038
Rat
regulation of rna metabolic processGO:00512523910.038
Mouse
regulation of nervous system developmentGO:00519602640.037
Rat
transmission of nerve impulseGO:0019226420.037
transcription from rna polymerase ii promoterGO:00063662520.037
single organism reproductive processGO:00447022970.037
positive regulation of biosynthetic processGO:00098913190.037
regulation of protein modification processGO:00313991940.037
negative regulation of molecular functionGO:00440921330.036
response to woundingGO:00096112540.036
multicellular organismal reproductive processGO:00486092330.036
positive regulation of molecular functionGO:00440932300.036
circulatory system developmentGO:00723591340.036
amine metabolic processGO:0009308380.036
response to nutrient levelsGO:00316673700.035
response to transition metal nanoparticleGO:19902671220.035
positive regulation of cell proliferationGO:00082842490.035
response to corticosteroidGO:00319602350.035
actin filament based processGO:0030029860.034
Fly
cellular response to endogenous stimulusGO:00714953770.034
defense responseGO:00069521940.034
metal ion transportGO:00300012890.034
heart developmentGO:0007507720.033
regulation of ion transportGO:00432692450.033
cellular component movementGO:00069282480.032
neuron projection developmentGO:00311752730.032
Rat
positive regulation of phosphate metabolic processGO:00459372620.032
negative regulation of cellular biosynthetic processGO:00313271610.031
regulation of cell motilityGO:20001451310.031
nitrogen compound transportGO:00717052290.031
positive regulation of nervous system developmentGO:00519621780.031
cellular response to organic cyclic compoundGO:00714072020.031
organonitrogen compound catabolic processGO:19015651790.030
cytoskeleton organizationGO:00070101110.030
Fly
inorganic ion transmembrane transportGO:00986602290.030
response to glucocorticoidGO:00513842230.030
cellular response to steroid hormone stimulusGO:0071383930.030
positive regulation of programmed cell deathGO:00430681570.030
heart contractionGO:0060047570.030
negative regulation of gene expressionGO:00106291990.030
cellular response to oxygen containing compoundGO:19017013860.029
positive regulation of signal transductionGO:00099671750.029
cation transportGO:00068123820.029
positive regulation of nucleobase containing compound metabolic processGO:00459353190.029
response to molecule of bacterial originGO:00022371940.029
hormone secretionGO:00468791150.028
positive regulation of neurogenesisGO:00507691650.028
cellular response to glucocorticoid stimulusGO:0071385680.028
rna biosynthetic processGO:00327743800.028
Mouse
cellular response to cytokine stimulusGO:00713451270.028
lipid biosynthetic processGO:00086101280.028
response to extracellular stimulusGO:00099913800.028
peptidyl tyrosine modificationGO:0018212720.028
regulation of cell developmentGO:00602842630.028
Rat
rhythmic processGO:00485111560.028
positive regulation of cellular protein metabolic processGO:00322701670.027
muscle tissue developmentGO:0060537580.027
positive regulation of protein modification processGO:00314011420.027
regulation of transcription from rna polymerase ii promoterGO:00063572340.027
single organism behaviorGO:00447081300.027
response to ketoneGO:19016541820.027
positive regulation of gene expressionGO:00106282440.027
response to tumor necrosis factorGO:0034612560.027
secretionGO:00469033070.027
response to ethanolGO:00454711620.027
amide transportGO:00428861050.027
regulation of cell projection organizationGO:00313441750.027
Rat
head developmentGO:00603222470.027
muscle cell differentiationGO:0042692520.026
Fly
regulation of anatomical structure morphogenesisGO:00226031410.026
Rat
response to oxygen levelsGO:00704822650.026
purine ribonucleoside metabolic processGO:00461281680.026
endocytosisGO:0006897840.026
positive regulation of transcription dna templatedGO:00458931970.026
central nervous system developmentGO:00074173110.026
organic substance catabolic processGO:19015753160.026
regulation of hormone levelsGO:00108171870.026
macromolecular complex assemblyGO:00650032730.026
divalent inorganic cation transportGO:00725111340.026
cellular lipid metabolic processGO:00442552080.025
positive regulation of intracellular signal transductionGO:19025331380.025
negative regulation of signalingGO:00230571570.025
cellular macromolecule localizationGO:00707271220.025
regulation of cell migrationGO:00303341280.025
cellular protein localizationGO:00346131220.025
gland developmentGO:00487321550.025
response to toxic substanceGO:00096361330.025
divalent metal ion transportGO:00708381320.025
response to lipopolysaccharideGO:00324961910.025
negative regulation of cell deathGO:00605482290.024
sexual reproductionGO:00199531480.024
chemical homeostasisGO:00488782920.024
regulation of neurogenesisGO:00507672470.024
Rat
regulation of signal transductionGO:00099663180.024
brain developmentGO:00074202470.024
purine nucleotide metabolic processGO:00061632290.024
cellular response to peptideGO:19016531330.024
positive regulation of apoptotic processGO:00430651540.023
lipid localizationGO:0010876620.023
homeostatic processGO:00425923310.023
single organism catabolic processGO:00447122830.023
neurological system processGO:00508772190.023
positive regulation of nucleic acid templated transcriptionGO:19035081970.023
gastrulationGO:000736920.022
response to cytokineGO:00340972150.022
cellular response to growth factor stimulusGO:00713631620.022
regulation of cellular catabolic processGO:00313291010.022
positive regulation of macromolecule biosynthetic processGO:00105572470.022
regulation of secretionGO:00510462240.022
negative regulation of nitrogen compound metabolic processGO:00511721610.022
response to growth factorGO:00708481890.022
response to biotic stimulusGO:00096072260.022
response to oxidative stressGO:00069791860.022
regulation of cellular protein metabolic processGO:00322682670.021
striated muscle tissue developmentGO:0014706580.021
g protein coupled receptor signaling pathwayGO:00071862420.021
multicellular organismal signalingGO:0035637440.021
epithelium developmentGO:0060429960.021
ras protein signal transductionGO:0007265290.021
regulation of cellular component movementGO:00512701500.021
positive regulation of protein metabolic processGO:00512471780.021
cellular nitrogen compound catabolic processGO:00442701630.021
response to bacteriumGO:00096172000.021
cellular response to extracellular stimulusGO:0031668730.021
transmembrane transportGO:00550854120.021
single organism intracellular transportGO:19025821660.021
proteolysisGO:00065081750.021
regulation of transmembrane transportGO:00347621220.021
regulation of neuron projection developmentGO:00109751610.020
Rat
cellular chemical homeostasisGO:00550822470.020
response to decreased oxygen levelsGO:00362932370.020
negative regulation of extrinsic apoptotic signaling pathwayGO:200123740.020
negative regulation of cell differentiationGO:0045596990.020
peptide transportGO:0015833970.020
inorganic cation transmembrane transportGO:00986622020.020
negative regulation of cell developmentGO:0010721820.020
negative regulation of cell proliferationGO:00082851190.020
negative regulation of nervous system developmentGO:0051961790.020
organic anion transportGO:00157111320.020
biological adhesionGO:00226101100.020
Fly
positive regulation of defense responseGO:0031349370.020
muscle contractionGO:0006936880.020
wound healingGO:00420601220.020
multicellular organism growthGO:003526410.019
cellular response to metal ionGO:0071248550.019
heart morphogenesisGO:000300730.019
neuronal action potentialGO:0019228350.019
protein transportGO:00150311320.019
reactive nitrogen species metabolic processGO:200105710.019
regulation of ion transmembrane transportGO:00347651210.019
protein homooligomerizationGO:0051260910.019
nucleobase containing small molecule metabolic processGO:00550863160.019
regulation of protein localizationGO:0032880810.019
ribonucleotide metabolic processGO:00092592310.018
regulation of blood circulationGO:19035221100.018
aromatic compound catabolic processGO:00194391680.018
nucleoside phosphate metabolic processGO:00067532830.018
organic cyclic compound catabolic processGO:19013611750.018
negative regulation of cell communicationGO:00106481580.018
regulation of hormone secretionGO:00468831060.018
cognitionGO:0050890920.018
positive regulation of cell developmentGO:00107201760.018
regulation of vesicle mediated transportGO:0060627810.018
negative regulation of macromolecule metabolic processGO:00106052600.018
establishment of protein localizationGO:00451841410.018
axis specificationGO:000979840.018
gamete generationGO:00072761240.018
positive regulation of synaptic transmissionGO:0050806620.018
regulation of membrane potentialGO:00423911100.018
negative regulation of macromolecule biosynthetic processGO:00105581480.018
cellular response to nitrogen compoundGO:19016992100.018
positive regulation of cell differentiationGO:00455972170.018
Rat
glial cell differentiationGO:0010001650.018
synaptic transmissionGO:00072682350.017
Rat
peptide secretionGO:0002790860.017
regulation of muscle system processGO:0090257790.017
protein heterooligomerizationGO:0051291890.017
cell cycleGO:00070491010.017
organ morphogenesisGO:0009887750.017
negative regulation of rna metabolic processGO:00512531230.017
regulation of endocytosisGO:0030100420.017
small molecule biosynthetic processGO:00442831240.017
adult locomotory behaviorGO:000834440.017
nucleoside metabolic processGO:00091161790.017
positive regulation of oxidoreductase activityGO:005135370.017
reactive oxygen species metabolic processGO:0072593370.017
small gtpase mediated signal transductionGO:0007264360.017
negative regulation of signal transductionGO:0009968830.017
action potentialGO:0001508540.017
response to external biotic stimulusGO:00432072210.017
intracellular transportGO:00469071850.017
calcium ion transportGO:00068161310.017
regenerationGO:00310991630.016
purine ribonucleotide metabolic processGO:00091502270.016
growthGO:00400071650.016
lipid transportGO:0006869610.016
signal transduction by phosphorylationGO:00230141440.016
negative regulation of developmental processGO:00510931250.016
ion transmembrane transportGO:00342203650.016
multicellular organism reproductionGO:00325042330.016
vasoconstrictionGO:0042310540.016
negative regulation of protein metabolic processGO:00512481140.016
purine nucleotide catabolic processGO:00061951360.016
positive regulation of rna metabolic processGO:00512542030.015
regulation of metal ion transportGO:00109591180.015
organophosphate metabolic processGO:00196373700.015
regulation of transferase activityGO:00513381230.015
regulation of transmembrane transporter activityGO:0022898490.015
anatomical structure formation involved in morphogenesisGO:0048646830.015
Fly
muscle cell developmentGO:0055001260.015
Fly
cellular cation homeostasisGO:00300031800.015
regulation of blood vessel sizeGO:0050880890.015
purine nucleoside monophosphate metabolic processGO:0009126840.015
regulation of transporter activityGO:0032409500.015
purine containing compound catabolic processGO:00725231380.015
cellular component morphogenesisGO:00329891550.015
Rat Fly
positive regulation of organelle organizationGO:0010638480.015
apoptotic signaling pathwayGO:0097190270.015
regulation of tube sizeGO:0035150890.015
inflammatory responseGO:00069541500.015
heterocycle catabolic processGO:00467001670.015
positive regulation of rna biosynthetic processGO:19026801970.015
protein targetingGO:0006605610.015
single organism biosynthetic processGO:00447113420.015
jak stat cascadeGO:0007259260.014
purine ribonucleotide catabolic processGO:00091541360.014
glucose homeostasisGO:0042593750.014
purine nucleoside metabolic processGO:00422781690.014
regulation of calcium ion transportGO:0051924770.014
anterior posterior pattern specificationGO:000995210.014
regulation of mapk cascadeGO:00434081160.014
response to alkaloidGO:00432791320.014
intrinsic apoptotic signaling pathway in response to dna damageGO:000863010.014
positive regulation of cell projection organizationGO:00313461110.014
peptidyl amino acid modificationGO:00181931260.014
cellular response to oxidative stressGO:0034599760.014
response to reactive oxygen speciesGO:00003021200.014
negative regulation of response to stimulusGO:00485851550.013
positive regulation of transferase activityGO:0051347810.013
negative regulation of rna biosynthetic processGO:19026791180.013
peptide hormone secretionGO:0030072840.013
organic acid transportGO:00158491160.013
positive regulation of mapk cascadeGO:0043410920.013
positive regulation of secretion by cellGO:19035321280.013
circulatory system processGO:00030131830.013
regulation of kinase activityGO:00435491170.013
regulation of cell morphogenesisGO:0022604770.013
Rat
regulation of peptide transportGO:0090087870.013
negative regulation of catalytic activityGO:00430861030.013
pinocytosisGO:000690710.013
positive regulation of ion transportGO:0043270940.013
response to acid chemicalGO:00011012220.013
axon ensheathmentGO:0008366400.013
nucleotide metabolic processGO:00091172790.013
regulation of skeletal muscle cell differentiationGO:200101410.013
cellular response to hormone stimulusGO:00328702470.013
embryo developmentGO:0009790490.013
purine ribonucleoside monophosphate catabolic processGO:0009169550.013
ribonucleotide catabolic processGO:00092611360.013
cellular response to hypoxiaGO:0071456510.013
negative regulation of cellular macromolecule biosynthetic processGO:20001131410.012
response to hydrogen peroxideGO:0042542890.012
cellular response to alcoholGO:0097306870.012
purine nucleoside triphosphate catabolic processGO:00091461220.012
reproductive system developmentGO:00614581280.012
positive regulation of cell motilityGO:2000147970.012
regulation of erk1 and erk2 cascadeGO:0070372410.012
response to glucoseGO:00097491360.012
reproductionGO:00000032450.012
nucleoside monophosphate catabolic processGO:0009125560.012
gonad developmentGO:00084061040.012
carboxylic acid transportGO:00469421150.012
organelle assemblyGO:0070925220.012
Fly
cell cell signaling involved in cell fate commitmentGO:004516820.012
regulation of protein kinase activityGO:00458591050.012
heart processGO:0003015570.012
cellular homeostasisGO:00197252520.012
negative regulation of phosphate metabolic processGO:0045936800.012
response to amino acidGO:0043200750.012
acid secretionGO:0046717480.012
gliogenesisGO:0042063930.012
cellular response to inorganic substanceGO:0071241650.012
lipid catabolic processGO:0016042460.012
alcohol metabolic processGO:0006066770.012
regulation of reactive oxygen species biosynthetic processGO:190342650.012
positive regulation of neuron differentiationGO:00456661260.012
cation transmembrane transportGO:00986552630.011
cellular response to interleukin 1GO:0071347370.011
muscle system processGO:00030121150.011
cell type specific apoptotic processGO:00972851340.011
cellular modified amino acid metabolic processGO:0006575610.011
anion transportGO:00068201780.011
ribose phosphate metabolic processGO:00196932350.011
cellular response to organonitrogen compoundGO:00714171970.011
intracellular protein transportGO:0006886790.011
male gamete generationGO:0048232990.011
regulation of peptide secretionGO:0002791820.011
carbohydrate derivative catabolic processGO:19011361470.011
ribonucleoside metabolic processGO:00091191740.011
positive regulation of protein kinase activityGO:0045860730.011
protein oligomerizationGO:00512591910.011
regulation of anatomical structure sizeGO:00900661350.011
carbohydrate derivative biosynthetic processGO:19011371240.011
purine containing compound metabolic processGO:00725212530.011
regulation of organelle organizationGO:0033043800.011
positive regulation of endocytosisGO:0045807280.011
positive regulation of kinase activityGO:0033674770.011
dendrite developmentGO:0016358720.010
Rat
exocytosisGO:0006887600.010
purine ribonucleoside catabolic processGO:00461301240.010
positive regulation of blood circulationGO:1903524650.010
response to estrogenGO:00436272320.010
negative regulation of nucleotide metabolic processGO:0045980230.010
purine nucleoside triphosphate metabolic processGO:00091441410.010
positive regulation of secretionGO:00510471400.010
regulation of reactive oxygen species metabolic processGO:2000377260.010
learning or memoryGO:0007611900.010
cold acclimationGO:000963110.010
axon developmentGO:0061564960.010
cellular response to monosaccharide stimulusGO:0071326670.010
cell morphogenesis involved in differentiationGO:00009041190.010
Rat
cellular response to reactive oxygen speciesGO:0034614550.010
cellular response to nutrient levelsGO:0031669600.010
purine nucleoside catabolic processGO:00061521240.010
hormone metabolic processGO:0042445690.010
female sex differentiationGO:0046660590.010
ribonucleoside monophosphate metabolic processGO:0009161880.010
spermatogenesisGO:0007283990.010
mesoderm developmentGO:000749820.010
protein importGO:0017038370.010
response to nutrientGO:00075842480.010

Pdlim1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
nervous system diseaseDOID:86300.022
disease of anatomical entityDOID:700.022
muscular diseaseDOID:008000000.018
muscle tissue diseaseDOID:6600.018
musculoskeletal system diseaseDOID:1700.018
cardiomyopathyDOID:005070000.018
myopathyDOID:42300.018
heart diseaseDOID:11400.018
dilated cardiomyopathyDOID:1293000.018
cardiovascular system diseaseDOID:128700.018
intrinsic cardiomyopathyDOID:006003600.018
central nervous system diseaseDOID:33100.014
urinary system diseaseDOID:1800.011