| alternative mrna splicing via spliceosome | GO:0000380 | 4 | 0.874 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 2 | 0.510 | |
| rna metabolic process | GO:0016070 | 406 | 0.326 | |
| mrna metabolic process | GO:0016071 | 20 | 0.260 | |
| regulation of rna metabolic process | GO:0051252 | 391 | 0.179 | |
| mrna processing | GO:0006397 | 14 | 0.098 | |
| rna splicing via transesterification reactions | GO:0000375 | 7 | 0.088 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 161 | 0.082 | |
| negative regulation of rna metabolic process | GO:0051253 | 123 | 0.081 | |
| transcription dna templated | GO:0006351 | 377 | 0.078 | Mouse Rat |
| reproduction | GO:0000003 | 245 | 0.059 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 7 | 0.051 | |
| rna biosynthetic process | GO:0032774 | 380 | 0.045 | Mouse Rat |
| cellular component biogenesis | GO:0044085 | 368 | 0.043 | |
| microtubule organizing center organization | GO:0031023 | 1 | 0.040 | |
| positive regulation of transcription dna templated | GO:0045893 | 197 | 0.039 | Mouse Rat |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.038 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.038 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.036 | Mouse Rat |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.036 | |
| centrosome cycle | GO:0007098 | 1 | 0.032 | |
| negative regulation of rna splicing | GO:0033119 | 3 | 0.032 | |
| mrna stabilization | GO:0048255 | 2 | 0.032 | |
| amine metabolic process | GO:0009308 | 38 | 0.031 | |
| rna stabilization | GO:0043489 | 2 | 0.030 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.030 | |
| organic substance catabolic process | GO:1901575 | 316 | 0.029 | |
| chromatin assembly or disassembly | GO:0006333 | 1 | 0.029 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.028 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.028 | Mouse Rat |
| regulation of cell proliferation | GO:0042127 | 359 | 0.027 | |
| sexual reproduction | GO:0019953 | 148 | 0.027 | |
| regulation of rna splicing | GO:0043484 | 6 | 0.026 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.026 | Mouse Rat |
| protein complex biogenesis | GO:0070271 | 263 | 0.024 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.024 | Mouse Rat |
| organelle organization | GO:0006996 | 266 | 0.024 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.024 | |
| single organism reproductive process | GO:0044702 | 297 | 0.023 | |
| regulation of protein metabolic process | GO:0051246 | 289 | 0.023 | |
| regulation of mrna stability | GO:0043488 | 3 | 0.023 | |
| regulation of cellular protein metabolic process | GO:0032268 | 267 | 0.022 | |
| sex differentiation | GO:0007548 | 113 | 0.022 | |
| regulation of programmed cell death | GO:0043067 | 341 | 0.021 | |
| reproductive process | GO:0022414 | 372 | 0.021 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.021 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.020 | |
| centrosome organization | GO:0051297 | 1 | 0.020 | |
| cellular component assembly | GO:0022607 | 360 | 0.020 | |
| organelle fission | GO:0048285 | 25 | 0.020 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 234 | 0.020 | Mouse |
| transcription from rna polymerase ii promoter | GO:0006366 | 252 | 0.019 | Mouse |
| organ regeneration | GO:0031100 | 101 | 0.019 | |
| multicellular organism reproduction | GO:0032504 | 233 | 0.019 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 197 | 0.018 | Mouse Rat |
| regulation of molecular function | GO:0065009 | 398 | 0.018 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 148 | 0.018 | |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.018 | |
| regulation of apoptotic process | GO:0042981 | 335 | 0.018 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 197 | 0.017 | Mouse Rat |
| nucleobase containing compound catabolic process | GO:0034655 | 152 | 0.017 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 148 | 0.017 | Mouse |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.017 | |
| gamete generation | GO:0007276 | 124 | 0.017 | |
| nucleosome organization | GO:0034728 | 1 | 0.016 | |
| rna catabolic process | GO:0006401 | 3 | 0.016 | |
| organic cyclic compound catabolic process | GO:1901361 | 175 | 0.016 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.016 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.016 | Mouse Rat |
| positive regulation of gene expression | GO:0010628 | 244 | 0.015 | |
| camera type eye development | GO:0043010 | 48 | 0.015 | |
| cell type specific apoptotic process | GO:0097285 | 134 | 0.015 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 118 | 0.015 | |
| brain development | GO:0007420 | 247 | 0.014 | |
| central nervous system development | GO:0007417 | 311 | 0.014 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 167 | 0.014 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.014 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 3 | 0.014 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 153 | 0.014 | |
| heterocycle catabolic process | GO:0046700 | 167 | 0.013 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.013 | |
| muscle organ morphogenesis | GO:0048644 | 1 | 0.013 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 141 | 0.013 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.013 | |
| catabolic process | GO:0009056 | 351 | 0.013 | |
| nitrogen compound transport | GO:0071705 | 229 | 0.013 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.012 | Mouse Rat |
| regulation of cellular component organization | GO:0051128 | 368 | 0.012 | |
| ossification | GO:0001503 | 70 | 0.012 | |
| neuromuscular synaptic transmission | GO:0007274 | 2 | 0.012 | |
| positive regulation of cell communication | GO:0010647 | 271 | 0.012 | |
| ncrna processing | GO:0034470 | 3 | 0.012 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 1 | 0.012 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.012 | |
| positive regulation of cell differentiation | GO:0045597 | 217 | 0.012 | |
| rna splicing | GO:0008380 | 11 | 0.012 | |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.011 | |
| gonad development | GO:0008406 | 104 | 0.011 | |
| regulation of cell development | GO:0060284 | 263 | 0.011 | |
| rna processing | GO:0006396 | 22 | 0.011 | |
| embryonic appendage morphogenesis | GO:0035113 | 4 | 0.011 | |
| positive regulation of nervous system development | GO:0051962 | 178 | 0.011 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.011 | |
| positive regulation of phosphorylation | GO:0042327 | 177 | 0.011 | |
| regulation of nervous system development | GO:0051960 | 264 | 0.011 | |
| aromatic compound catabolic process | GO:0019439 | 168 | 0.010 | |
| positive regulation of cell development | GO:0010720 | 176 | 0.010 | |
| hormone secretion | GO:0046879 | 115 | 0.010 | |
| appendage morphogenesis | GO:0035107 | 4 | 0.010 | |
| neuron development | GO:0048666 | 286 | 0.010 | |
| locomotion | GO:0040011 | 237 | 0.010 | |
| cellular catabolic process | GO:0044248 | 295 | 0.010 | |
